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Packagehl7.eu.fhir.protect-child
Resource TypeCodeSystem
IdCodeSystem-graft-pathology-cs.json
FHIR VersionR4
Sourcehttps://build.fhir.org/ig/hl7-eu/protect-child/CodeSystem-graft-pathology-cs.html
URLhttps://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/graft-pathology-cs
Version0.1.0-ci-build
Statusdraft
Date2026-09-28T06:51:47+00:00
NameGraftPathologyCS
TitleGraft Pathology Codes
Realmeu
Authorityhl7
DescriptionLocal observation and component codes for graft biopsy scoring: the Banff diagnostic category, the Banff lesion scores, and the liver Banff Rejection Activity Index with its three constituent scores. Neither LOINC nor SNOMED CT carries these.
Contentcomplete

Resources that use this resource

ConceptMap
hl7.eu.fhir.protect-child#currentdm-immunological-data-to-fhirDM immunological_data columns → FHIR codes
ValueSet
hl7.eu.fhir.protect-child#currentbanff-lesion-vsBanff Lesion Score ValueSet
hl7.eu.fhir.protect-child#currentliver-rai-component-vsLiver RAI Component ValueSet

Resources that this resource uses

No resources found


Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: CodeSystem graft-pathology-cs

This case-sensitive code system https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/graft-pathology-cs defines the following codes:

CodeDisplayDefinition
banff-category Banff diagnostic categoryBanff 2022 diagnostic category assigned on a kidney allograft biopsy.
liver-rai Banff Rejection Activity Index (liver)Total Banff Rejection Activity Index (RAI) for liver allograft rejection, 0–9.
banff-g g – glomerulitisBanff lesion score for glomerulitis, graded 0–3.
banff-ptc ptc – peritubular capillaritisBanff lesion score for peritubular capillaritis, graded 0–3.
banff-i i – interstitial inflammationBanff lesion score for interstitial inflammation, graded 0–3.
banff-t t – tubulitisBanff lesion score for tubulitis, graded 0–3.
banff-v v – intimal arteritisBanff lesion score for intimal arteritis, graded 0–3.
banff-ci ci – interstitial fibrosisBanff lesion score for interstitial fibrosis, graded 0–3.
banff-ct ct – tubular atrophyBanff lesion score for tubular atrophy, graded 0–3.
banff-cg cg – transplant glomerulopathyGlomerular basement membrane double contours. Banff scores cg1 as cg1a/cg1b; both are recorded here as 1.
banff-ah ah – arteriolar hyalinosisBanff lesion score for arteriolar hyalinosis, graded 0–3.
banff-mm mm – mesangial matrix expansionBanff lesion score for mesangial matrix expansion, graded 0–3.
rai-portal-inflammation Portal inflammationRejection activity index component for portal inflammation, graded 0–3.
rai-bile-duct-inflammation Bile duct inflammation / damageRejection activity index component for bile duct inflammation / damage, graded 0–3.
rai-venous-endothelial-inflammation Venous endothelial inflammationRejection activity index component for venous endothelial inflammation, graded 0–3.

Source1

{
  "resourceType": "CodeSystem",
  "id": "graft-pathology-cs",
  "text": {
    "status": "generated",
    "div": "<!-- snip (see above) -->"
  },
  "url": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/graft-pathology-cs",
  "version": "0.1.0-ci-build",
  "name": "GraftPathologyCS",
  "title": "Graft Pathology Codes",
  "status": "draft",
  "experimental": true,
  "date": "2026-09-28T06:51:47+00:00",
  "publisher": "Protect Child",
  "contact": [
    {
      "name": "Protect Child",
      "telecom": [
        {
          "system": "url",
          "value": "https://protect-child.eu/"
        }
      ]
    }
  ],
  "description": "Local observation and component codes for graft biopsy scoring: the Banff diagnostic category, the Banff lesion scores, and the liver Banff Rejection Activity Index with its three constituent scores. Neither LOINC nor SNOMED CT carries these.",
  "caseSensitive": true,
  "content": "complete",
  "count": 15,
  "concept": [
    {
      "code": "banff-category",
      "display": "Banff diagnostic category",
      "definition": "Banff 2022 diagnostic category assigned on a kidney allograft biopsy."
    },
    {
      "code": "liver-rai",
      "display": "Banff Rejection Activity Index (liver)",
      "definition": "Total Banff Rejection Activity Index (RAI) for liver allograft rejection, 0–9."
    },
    {
      "code": "banff-g",
      "display": "g – glomerulitis",
      "definition": "Banff lesion score for glomerulitis, graded 0–3."
    },
    {
      "code": "banff-ptc",
      "display": "ptc – peritubular capillaritis",
      "definition": "Banff lesion score for peritubular capillaritis, graded 0–3."
    },
    {
      "code": "banff-i",
      "display": "i – interstitial inflammation",
      "definition": "Banff lesion score for interstitial inflammation, graded 0–3."
    },
    {
      "code": "banff-t",
      "display": "t – tubulitis",
      "definition": "Banff lesion score for tubulitis, graded 0–3."
    },
    {
      "code": "banff-v",
      "display": "v – intimal arteritis",
      "definition": "Banff lesion score for intimal arteritis, graded 0–3."
    },
    {
      "code": "banff-ci",
      "display": "ci – interstitial fibrosis",
      "definition": "Banff lesion score for interstitial fibrosis, graded 0–3."
    },
    {
      "code": "banff-ct",
      "display": "ct – tubular atrophy",
      "definition": "Banff lesion score for tubular atrophy, graded 0–3."
    },
    {
      "code": "banff-cg",
      "display": "cg – transplant glomerulopathy",
      "definition": "Glomerular basement membrane double contours. Banff scores cg1 as cg1a/cg1b; both are recorded here as 1."
    },
    {
      "code": "banff-ah",
      "display": "ah – arteriolar hyalinosis",
      "definition": "Banff lesion score for arteriolar hyalinosis, graded 0–3."
    },
    {
      "code": "banff-mm",
      "display": "mm – mesangial matrix expansion",
      "definition": "Banff lesion score for mesangial matrix expansion, graded 0–3."
    },
    {
      "code": "rai-portal-inflammation",
      "display": "Portal inflammation",
      "definition": "Rejection activity index component for portal inflammation, graded 0–3."
    },
    {
      "code": "rai-bile-duct-inflammation",
      "display": "Bile duct inflammation / damage",
      "definition": "Rejection activity index component for bile duct inflammation / damage, graded 0–3."
    },
    {
      "code": "rai-venous-endothelial-inflammation",
      "display": "Venous endothelial inflammation",
      "definition": "Rejection activity index component for venous endothelial inflammation, graded 0–3."
    }
  ]
}