Package | who.ddcc |
Type | StructureMap |
Id | Id |
FHIR Version | R4 |
Source | http://smart.who.int/ddcc/https://build.fhir.org/ig/WorldHealthOrganization/ddcc/StructureMap-CertDIVOCtoCoreDataSet.html |
Url | http://smart.who.int/ddcc/StructureMap/CertDIVOCtoCoreDataSet |
Version | 1.0.0 |
Status | draft |
Date | 2024-10-17T05:03:04+00:00 |
Name | CertDIVOCtoCoreDataSet |
Experimental | False |
Realm | uv |
Authority | who |
Description | Structure map transforming CertDIVOC logical model to bundle of Core Data Set logical model |
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Note: links and images are rebased to the (stated) source
Generated Narrative: StructureMap CertDIVOCtoCoreDataSet
map "http://smart.who.int/ddcc/StructureMap/CertDIVOCtoCoreDataSet" = "CertDIVOCtoCoreDataSet" // Structure map transforming CertDIVOC logical model to bundle of Core Data Set logical model uses "http://smart.who.int/ddcc/StructureDefinition/CertDIVOC" alias DIVOC as source uses "http://hl7.org/fhir/StructureDefinition/Bundle" alias DDCCBundle as target uses "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet" alias DDCC as target uses "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetVS" alias DDCCVS as target uses "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetTR" alias DDCCTR as target group CertDIVOCtoCoreDataSetBundle(source src : DIVOC, target ddccBundle : DDCCBundle) { src.type as type then { type where type = 'ProofOfVaccinationCredential' then { src.evidence as evidence -> ddccBundle.entry as outentry, create('http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetVS') as ddcc then { src.credentialSubject as credentialSubject then CredentialSubjecttoCoreDataSet(credentialSubject, ddcc) "set patient"; src -> ddcc.certificate as certificate then CertDIVOCtoCoreDataSetCertificate(src, evidence, certificate) "set certificate"; evidence -> ddcc.vaccination as vaccination then EvidencetoCoreDataSetVS(evidence, vaccination) "set vaccination"; evidence -> outentry.resource = ddcc "set outentry"; }; } "ProofOfVaccinationCredential"; type where type = 'ProofOfTestCertificateCredential' then { src.evidence as evidence -> ddccBundle.entry as outentry, create('http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetTR') as ddcc then { src.credentialSubject as credentialSubject then CredentialSubjecttoCoreDataSet(credentialSubject, ddcc) "set patient"; src -> ddcc.certificate as certificate then CertDIVOCtoCoreDataSetCertificate(src, evidence, certificate) "set certificate"; evidence -> ddcc.test as test then EvidencetoCoreDataSetTR(evidence, test) "set test"; evidence -> outentry.resource = ddcc "set outentry"; }; } "ProofOfTestCertificateCredential"; }; } group CredentialSubjecttoCoreDataSet(source credentialSubject, target ddcc : DDCC) { credentialSubject.name as name -> ddcc.name = name "set name"; credentialSubject.dob as birthDate -> ddcc.birthDate = birthDate "set birthDate"; credentialSubject.id as id -> create('Identifier') as identifier, identifier.value = id then { id -> ddcc.identifier = identifier "set identifier"; } "identifier"; } group CertDIVOCtoCoreDataSetCertificate(source src : DIVOC, source evidence, target certificate) { evidence.certificateId as certificateId -> certificate.hcid as hcid, hcid.value = certificateId "set hcid"; src.context as context then { context where (context.contains('cowin.gov.in')) -> certificate.version = context "set version"; }; evidence -> certificate.period = create('Period') as period then { evidence.effectiveStart as effectiveStart -> period.start = effectiveStart "set period start"; evidence.effectiveUntil as effectiveUntil -> period.end = effectiveUntil "set period end"; } "period"; src.issuer as issuer -> certificate.issuer = create('Reference') as issuer, issuer.display = issuer "set issuer"; } group EvidencetoCoreDataSetVS(source evidence, target vaccination) { evidence.icd11Code as icd11Code -> vaccination.vaccine as coding, coding.system = 'http://id.who.int/icd11/mms', coding.code = icd11Code "set vaccine"; evidence.vaccine as vaccine -> vaccination.brand as coding, coding.code = vaccine "set brand"; evidence.manufacturer as manufacturer -> vaccination.manufacturer as coding, coding.code = manufacturer "set manufacturer"; evidence.batch as batch -> vaccination.lot = batch "set lot"; evidence.date as date -> vaccination.date = date "set date"; evidence.dose as dose -> vaccination.dose = dose "set dose"; evidence.totalDoses as totalDoses -> vaccination.totalDoses = totalDoses "set totalDoses"; evidence.facility as facility then { facility.address as address then { address.addressCountry as addressCountry -> vaccination.country as coding, coding.system = 'urn:iso:std:iso:3166', coding.code = addressCountry "set country"; }; facility.name as name -> vaccination.centre = name "set centre"; }; evidence.verifier as verifier then { verifier.name as name -> vaccination.practitioner as practitioner, practitioner.value = name "set practitioner"; }; } group EvidencetoCoreDataSetTR(source evidence, target test) { evidence.disease as disease then { disease where disease = 'COVID-19' -> test.pathogen as coding, coding.system = 'http://id.who.int/icd11/mms', coding.code = 'XN109' "set COVID19 pathogen"; disease where (disease = 'COVID-19').not() -> test.pathogen as coding, coding.code = disease "set other pathogen"; }; evidence.testType as testType then { testType -> test.type as coding, coding.code = testType "set default type"; testType -> c('http://smart.who.int/ddcc/CodeSystem/lab-test-type-divoc', testType) as coded then { testType where coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-divoc') -> test.type = translate(coded, 'http://smart.who.int/ddcc/ConceptMap/lab-test-type-divoc-to-icd11', 'Coding') "translate DIVOC type"; } "coding"; }; evidence.sampleOrigin as sampleOrigin then { sampleOrigin -> test.origin as coding, coding.code = sampleOrigin "set default origin"; sampleOrigin -> c('http://smart.who.int/ddcc/CodeSystem/lab-test-sample-origin-divoc', sampleOrigin) as coded then { sampleOrigin where coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-sample-origin-divoc') -> test.origin = translate(coded, 'http://smart.who.int/ddcc/ConceptMap/lab-test-sample-origin-divoc-to-icd11', 'Coding') "translate DIVOC origin"; } "coding"; }; evidence.result as result then { result -> test.result as coding, coding.code = result "set default result"; result -> c('http://smart.who.int/ddcc/CodeSystem/lab-test-qual-result-divoc', result) as coded then { result where coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-qual-result-divoc') -> test.result = translate(coded, 'http://smart.who.int/ddcc/ConceptMap/lab-test-qual-result-divoc-to-icd11', 'Coding') "translate DIVOC result"; } "coded"; }; evidence.sampleCollectionTimestamp as date -> test.date = date "set date"; evidence.testName as testName -> test.brand as coding, coding.code = testName "set brand"; evidence.manufacturer as manufacturer -> test.manufacturer as coding, coding.code = manufacturer "set manufacturer"; evidence.facility as facility then { facility.address as address then { address.addressCountry as addressCountry -> test.country as coding, coding.system = 'urn:iso:std:iso:3166', coding.code = addressCountry "set country"; }; facility.name as name -> test.centre as coding, coding.code = name "set centre"; }; }
{
"resourceType" : "StructureMap",
"id" : "CertDIVOCtoCoreDataSet",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: StructureMap CertDIVOCtoCoreDataSet</b></p><a name=\"CertDIVOCtoCoreDataSet\"> </a><a name=\"hcCertDIVOCtoCoreDataSet\"> </a><a name=\"CertDIVOCtoCoreDataSet-en-US\"> </a><pre class=\"fml\">\r\n<b>map</b><span style=\"color: navy\"> "</span>http://smart.who.int/ddcc/StructureMap/CertDIVOCtoCoreDataSet<span style=\"color: navy\">" = "</span>CertDIVOCtoCoreDataSet<span style=\"color: navy\">"\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">Structure map transforming CertDIVOC logical model to bundle of Core Data Set logical model</span>\r\n\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"StructureDefinition-CertDIVOC.html\" title=\"Certificate - DIVOC Verifiable Credential Logical Model\">http://smart.who.int/ddcc/StructureDefinition/CertDIVOC</a><span style=\"color: navy\">" </span><b>alias </b>DIVOC <b>as </b><b>source</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"http://hl7.org/fhir/R4/bundle.html\" title=\"Bundle\">http://hl7.org/fhir/StructureDefinition/Bundle</a><span style=\"color: navy\">" </span><b>alias </b>DDCCBundle <b>as </b><b>target</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"StructureDefinition-DDCCCoreDataSet.html\" title=\"DDCC Core Data Set Logical Model\">http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet</a><span style=\"color: navy\">" </span><b>alias </b>DDCC <b>as </b><b>target</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"StructureDefinition-DDCCCoreDataSetVS.html\" title=\"DDCC Core Data Set Logical Model for Vaccination Status\">http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetVS</a><span style=\"color: navy\">" </span><b>alias </b>DDCCVS <b>as </b><b>target</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"StructureDefinition-DDCCCoreDataSetTR.html\" title=\"DDCC Core Data Set Logical Model for Test Result\">http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetTR</a><span style=\"color: navy\">" </span><b>alias </b>DDCCTR <b>as </b><b>target</b>\r\n\r\n<b>group </b>CertDIVOCtoCoreDataSetBundle<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span><span style=\"color: navy\"> : </span>DIVOC, <b>target</b> <span style=\"color: maroon\">ddccBundle</span><span style=\"color: navy\"> : </span>DDCCBundle<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> src.type<b> as </b><span style=\"color: maroon\">type</span><b> then</b><span style=\"color: navy\"> {\r\n</span> type<b> where </b>type = 'ProofOfVaccinationCredential'<b> then</b><span style=\"color: navy\"> {\r\n</span> src.evidence<b> as </b><span style=\"color: maroon\">evidence</span><span style=\"color: navy\"><b> -> </b></span> ddccBundle.entry<b> as </b><span style=\"color: maroon\">outentry</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetVS'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">ddcc</span><b> then</b><span style=\"color: navy\"> {\r\n</span> src.credentialSubject<b> as </b><span style=\"color: maroon\">credentialSubject</span><b> then </b>CredentialSubjecttoCoreDataSet<span style=\"color: navy\">(</span><span style=\"color: maroon\">credentialSubject</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">ddcc</span><span style=\"color: navy\">)</span> <i>"set patient"</i><span style=\"color: navy\">;</span>\r\n src<span style=\"color: navy\"><b> -> </b></span>ddcc.certificate<b> as </b><span style=\"color: maroon\">certificate</span><b> then </b>CertDIVOCtoCoreDataSetCertificate<span style=\"color: navy\">(</span><span style=\"color: maroon\">src</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">evidence</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">certificate</span><span style=\"color: navy\">)</span> <i>"set certificate"</i><span style=\"color: navy\">;</span>\r\n evidence<span style=\"color: navy\"><b> -> </b></span>ddcc.vaccination<b> as </b><span style=\"color: maroon\">vaccination</span><b> then </b>EvidencetoCoreDataSetVS<span style=\"color: navy\">(</span><span style=\"color: maroon\">evidence</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">vaccination</span><span style=\"color: navy\">)</span> <i>"set vaccination"</i><span style=\"color: navy\">;</span>\r\n evidence<span style=\"color: navy\"><b> -> </b></span>outentry.resource = <span style=\"color: maroon\">ddcc</span> <i>"set outentry"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"ProofOfVaccinationCredential"</i><span style=\"color: navy\">;</span>\r\n type<b> where </b>type = 'ProofOfTestCertificateCredential'<b> then</b><span style=\"color: navy\"> {\r\n</span> src.evidence<b> as </b><span style=\"color: maroon\">evidence</span><span style=\"color: navy\"><b> -> </b></span> ddccBundle.entry<b> as </b><span style=\"color: maroon\">outentry</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetTR'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">ddcc</span><b> then</b><span style=\"color: navy\"> {\r\n</span> src.credentialSubject<b> as </b><span style=\"color: maroon\">credentialSubject</span><b> then </b>CredentialSubjecttoCoreDataSet<span style=\"color: navy\">(</span><span style=\"color: maroon\">credentialSubject</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">ddcc</span><span style=\"color: navy\">)</span> <i>"set patient"</i><span style=\"color: navy\">;</span>\r\n src<span style=\"color: navy\"><b> -> </b></span>ddcc.certificate<b> as </b><span style=\"color: maroon\">certificate</span><b> then </b>CertDIVOCtoCoreDataSetCertificate<span style=\"color: navy\">(</span><span style=\"color: maroon\">src</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">evidence</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">certificate</span><span style=\"color: navy\">)</span> <i>"set certificate"</i><span style=\"color: navy\">;</span>\r\n evidence<span style=\"color: navy\"><b> -> </b></span>ddcc.test<b> as </b><span style=\"color: maroon\">test</span><b> then </b>EvidencetoCoreDataSetTR<span style=\"color: navy\">(</span><span style=\"color: maroon\">evidence</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">test</span><span style=\"color: navy\">)</span> <i>"set test"</i><span style=\"color: navy\">;</span>\r\n evidence<span style=\"color: navy\"><b> -> </b></span>outentry.resource = <span style=\"color: maroon\">ddcc</span> <i>"set outentry"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"ProofOfTestCertificateCredential"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>CredentialSubjecttoCoreDataSet<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">credentialSubject</span>, <b>target</b> <span style=\"color: maroon\">ddcc</span><span style=\"color: navy\"> : </span>DDCC<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> credentialSubject.name<b> as </b><span style=\"color: maroon\">name</span><span style=\"color: navy\"><b> -> </b></span>ddcc.name = <span style=\"color: maroon\">name</span> <i>"set name"</i><span style=\"color: navy\">;</span>\r\n credentialSubject.dob<b> as </b><span style=\"color: maroon\">birthDate</span><span style=\"color: navy\"><b> -> </b></span>ddcc.birthDate = <span style=\"color: maroon\">birthDate</span> <i>"set birthDate"</i><span style=\"color: navy\">;</span>\r\n credentialSubject.id<b> as </b><span style=\"color: maroon\">id</span><span style=\"color: navy\"><b> -> </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Identifier'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">identifier</span><span style=\"color: navy\">, </span> identifier.value = <span style=\"color: maroon\">id</span><b> then</b><span style=\"color: navy\"> {\r\n</span> id<span style=\"color: navy\"><b> -> </b></span>ddcc.identifier = <span style=\"color: maroon\">identifier</span> <i>"set identifier"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"identifier"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>CertDIVOCtoCoreDataSetCertificate<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span><span style=\"color: navy\"> : </span>DIVOC, <b>source</b> <span style=\"color: maroon\">evidence</span>, <b>target</b> <span style=\"color: maroon\">certificate</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> evidence.certificateId<b> as </b><span style=\"color: maroon\">certificateId</span><span style=\"color: navy\"><b> -> </b></span> certificate.hcid<b> as </b><span style=\"color: maroon\">hcid</span><span style=\"color: navy\">, </span> hcid.value = <span style=\"color: maroon\">certificateId</span> <i>"set hcid"</i><span style=\"color: navy\">;</span>\r\n src.context<b> as </b><span style=\"color: maroon\">context</span><b> then</b><span style=\"color: navy\"> {\r\n</span> context<b> where </b>(context.contains('cowin.gov.in'))<span style=\"color: navy\"><b> -> </b></span>certificate.version = <span style=\"color: maroon\">context</span> <i>"set version"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n evidence<span style=\"color: navy\"><b> -> </b></span>certificate.period = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Period'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">period</span><b> then</b><span style=\"color: navy\"> {\r\n</span> evidence.effectiveStart<b> as </b><span style=\"color: maroon\">effectiveStart</span><span style=\"color: navy\"><b> -> </b></span>period.start = <span style=\"color: maroon\">effectiveStart</span> <i>"set period start"</i><span style=\"color: navy\">;</span>\r\n evidence.effectiveUntil<b> as </b><span style=\"color: maroon\">effectiveUntil</span><span style=\"color: navy\"><b> -> </b></span>period.end = <span style=\"color: maroon\">effectiveUntil</span> <i>"set period end"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"period"</i><span style=\"color: navy\">;</span>\r\n src.issuer<b> as </b><span style=\"color: maroon\">issuer</span><span style=\"color: navy\"><b> -> </b></span> certificate.issuer = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Reference'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">issuer</span><span style=\"color: navy\">, </span> issuer.display = <span style=\"color: maroon\">issuer</span> <i>"set issuer"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>EvidencetoCoreDataSetVS<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">evidence</span>, <b>target</b> <span style=\"color: maroon\">vaccination</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> evidence.icd11Code<b> as </b><span style=\"color: maroon\">icd11Code</span><span style=\"color: navy\"><b> -> </b></span> vaccination.vaccine<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://id.who.int/icd11/mms'</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">icd11Code</span> <i>"set vaccine"</i><span style=\"color: navy\">;</span>\r\n evidence.vaccine<b> as </b><span style=\"color: maroon\">vaccine</span><span style=\"color: navy\"><b> -> </b></span> vaccination.brand<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">vaccine</span> <i>"set brand"</i><span style=\"color: navy\">;</span>\r\n evidence.manufacturer<b> as </b><span style=\"color: maroon\">manufacturer</span><span style=\"color: navy\"><b> -> </b></span> vaccination.manufacturer<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">manufacturer</span> <i>"set manufacturer"</i><span style=\"color: navy\">;</span>\r\n evidence.batch<b> as </b><span style=\"color: maroon\">batch</span><span style=\"color: navy\"><b> -> </b></span>vaccination.lot = <span style=\"color: maroon\">batch</span> <i>"set lot"</i><span style=\"color: navy\">;</span>\r\n evidence.date<b> as </b><span style=\"color: maroon\">date</span><span style=\"color: navy\"><b> -> </b></span>vaccination.date = <span style=\"color: maroon\">date</span> <i>"set date"</i><span style=\"color: navy\">;</span>\r\n evidence.dose<b> as </b><span style=\"color: maroon\">dose</span><span style=\"color: navy\"><b> -> </b></span>vaccination.dose = <span style=\"color: maroon\">dose</span> <i>"set dose"</i><span style=\"color: navy\">;</span>\r\n evidence.totalDoses<b> as </b><span style=\"color: maroon\">totalDoses</span><span style=\"color: navy\"><b> -> </b></span>vaccination.totalDoses = <span style=\"color: maroon\">totalDoses</span> <i>"set totalDoses"</i><span style=\"color: navy\">;</span>\r\n evidence.facility<b> as </b><span style=\"color: maroon\">facility</span><b> then</b><span style=\"color: navy\"> {\r\n</span> facility.address<b> as </b><span style=\"color: maroon\">address</span><b> then</b><span style=\"color: navy\"> {\r\n</span> address.addressCountry<b> as </b><span style=\"color: maroon\">addressCountry</span><span style=\"color: navy\"><b> -> </b></span> vaccination.country<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'urn:iso:std:iso:3166'</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">addressCountry</span> <i>"set country"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n facility.name<b> as </b><span style=\"color: maroon\">name</span><span style=\"color: navy\"><b> -> </b></span>vaccination.centre = <span style=\"color: maroon\">name</span> <i>"set centre"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n evidence.verifier<b> as </b><span style=\"color: maroon\">verifier</span><b> then</b><span style=\"color: navy\"> {\r\n</span> verifier.name<b> as </b><span style=\"color: maroon\">name</span><span style=\"color: navy\"><b> -> </b></span> vaccination.practitioner<b> as </b><span style=\"color: maroon\">practitioner</span><span style=\"color: navy\">, </span> practitioner.value = <span style=\"color: maroon\">name</span> <i>"set practitioner"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>EvidencetoCoreDataSetTR<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">evidence</span>, <b>target</b> <span style=\"color: maroon\">test</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> evidence.disease<b> as </b><span style=\"color: maroon\">disease</span><b> then</b><span style=\"color: navy\"> {\r\n</span> disease<b> where </b>disease = 'COVID-19'<span style=\"color: navy\"><b> -> </b></span> test.pathogen<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://id.who.int/icd11/mms'</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'XN109'</span> <i>"set COVID19 pathogen"</i><span style=\"color: navy\">;</span>\r\n disease<b> where </b>(disease = 'COVID-19').not()<span style=\"color: navy\"><b> -> </b></span> test.pathogen<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">disease</span> <i>"set other pathogen"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n evidence.testType<b> as </b><span style=\"color: maroon\">testType</span><b> then</b><span style=\"color: navy\"> {\r\n</span> testType<span style=\"color: navy\"><b> -> </b></span> test.type<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">testType</span> <i>"set default type"</i><span style=\"color: navy\">;</span>\r\n testType<span style=\"color: navy\"><b> -> </b></span><b>c</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://smart.who.int/ddcc/CodeSystem/lab-test-type-divoc'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">testType</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coded</span><b> then</b><span style=\"color: navy\"> {\r\n</span> testType<b> where </b>coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-divoc')<span style=\"color: navy\"><b> -> </b></span>test.type = <b>translate</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">coded</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'http://smart.who.int/ddcc/ConceptMap/lab-test-type-divoc-to-icd11'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span> <i>"translate DIVOC type"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"coding"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n evidence.sampleOrigin<b> as </b><span style=\"color: maroon\">sampleOrigin</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sampleOrigin<span style=\"color: navy\"><b> -> </b></span> test.origin<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">sampleOrigin</span> <i>"set default origin"</i><span style=\"color: navy\">;</span>\r\n sampleOrigin<span style=\"color: navy\"><b> -> </b></span><b>c</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://smart.who.int/ddcc/CodeSystem/lab-test-sample-origin-divoc'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">sampleOrigin</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coded</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sampleOrigin<b> where </b>coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-sample-origin-divoc')<span style=\"color: navy\"><b> -> </b></span>test.origin = <b>translate</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">coded</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'http://smart.who.int/ddcc/ConceptMap/lab-test-sample-origin-divoc-to-icd11'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span> <i>"translate DIVOC origin"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"coding"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n evidence.result<b> as </b><span style=\"color: maroon\">result</span><b> then</b><span style=\"color: navy\"> {\r\n</span> result<span style=\"color: navy\"><b> -> </b></span> test.result<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">result</span> <i>"set default result"</i><span style=\"color: navy\">;</span>\r\n result<span style=\"color: navy\"><b> -> </b></span><b>c</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://smart.who.int/ddcc/CodeSystem/lab-test-qual-result-divoc'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">result</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coded</span><b> then</b><span style=\"color: navy\"> {\r\n</span> result<b> where </b>coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-qual-result-divoc')<span style=\"color: navy\"><b> -> </b></span>test.result = <b>translate</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">coded</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'http://smart.who.int/ddcc/ConceptMap/lab-test-qual-result-divoc-to-icd11'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span> <i>"translate DIVOC result"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"coded"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n evidence.sampleCollectionTimestamp<b> as </b><span style=\"color: maroon\">date</span><span style=\"color: navy\"><b> -> </b></span>test.date = <span style=\"color: maroon\">date</span> <i>"set date"</i><span style=\"color: navy\">;</span>\r\n evidence.testName<b> as </b><span style=\"color: maroon\">testName</span><span style=\"color: navy\"><b> -> </b></span> test.brand<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">testName</span> <i>"set brand"</i><span style=\"color: navy\">;</span>\r\n evidence.manufacturer<b> as </b><span style=\"color: maroon\">manufacturer</span><span style=\"color: navy\"><b> -> </b></span> test.manufacturer<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">manufacturer</span> <i>"set manufacturer"</i><span style=\"color: navy\">;</span>\r\n evidence.facility<b> as </b><span style=\"color: maroon\">facility</span><b> then</b><span style=\"color: navy\"> {\r\n</span> facility.address<b> as </b><span style=\"color: maroon\">address</span><b> then</b><span style=\"color: navy\"> {\r\n</span> address.addressCountry<b> as </b><span style=\"color: maroon\">addressCountry</span><span style=\"color: navy\"><b> -> </b></span> test.country<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'urn:iso:std:iso:3166'</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">addressCountry</span> <i>"set country"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n facility.name<b> as </b><span style=\"color: maroon\">name</span><span style=\"color: navy\"><b> -> </b></span> test.centre<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">name</span> <i>"set centre"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span></pre></div>"
},
"url" : "http://smart.who.int/ddcc/StructureMap/CertDIVOCtoCoreDataSet",
"version" : "1.0.0",
"name" : "CertDIVOCtoCoreDataSet",
"status" : "draft",
"date" : "2024-10-17T05:03:04+00:00",
"publisher" : "WHO",
"contact" : [
{
"name" : "WHO",
"telecom" : [
{
"system" : "url",
"value" : "http://who.int"
}
]
}
],
"description" : "Structure map transforming CertDIVOC logical model to bundle of Core Data Set logical model",
"jurisdiction" : [
{
"coding" : [
{
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001"
}
]
}
],
"structure" : [
{
"url" : "http://smart.who.int/ddcc/StructureDefinition/CertDIVOC",
"mode" : "source",
"alias" : "DIVOC"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/Bundle",
"mode" : "target",
"alias" : "DDCCBundle"
},
{
"url" : "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet",
"mode" : "target",
"alias" : "DDCC"
},
{
"url" : "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetVS",
"mode" : "target",
"alias" : "DDCCVS"
},
{
"url" : "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetTR",
"mode" : "target",
"alias" : "DDCCTR"
}
],
"group" : [
{
"name" : "CertDIVOCtoCoreDataSetBundle",
"typeMode" : "none",
"input" : [
{
"name" : "src",
"type" : "DIVOC",
"mode" : "source"
},
{
"name" : "ddccBundle",
"type" : "DDCCBundle",
"mode" : "target"
}
],
"rule" : [
{
"name" : "type",
"source" : [
{
"context" : "src",
"element" : "type",
"variable" : "type"
}
],
"rule" : [
{
"name" : "ProofOfVaccinationCredential",
"source" : [
{
"context" : "type",
"condition" : "type = 'ProofOfVaccinationCredential'"
}
],
"rule" : [
{
"name" : "evidence",
"source" : [
{
"context" : "src",
"element" : "evidence",
"variable" : "evidence"
}
],
"target" : [
{
"context" : "ddccBundle",
"contextType" : "variable",
"element" : "entry",
"variable" : "outentry"
},
{
"contextType" : "variable",
"variable" : "ddcc",
"transform" : "create",
"parameter" : [
{
"valueString" : "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetVS"
}
]
}
],
"rule" : [
{
"name" : "set patient",
"source" : [
{
"context" : "src",
"element" : "credentialSubject",
"variable" : "credentialSubject"
}
],
"dependent" : [
{
"name" : "CredentialSubjecttoCoreDataSet",
"variable" : [
"credentialSubject",
"ddcc"
]
}
]
},
{
"name" : "set certificate",
"source" : [
{
"context" : "src"
}
],
"target" : [
{
"context" : "ddcc",
"contextType" : "variable",
"element" : "certificate",
"variable" : "certificate"
}
],
"dependent" : [
{
"name" : "CertDIVOCtoCoreDataSetCertificate",
"variable" : [
"src",
"evidence",
"certificate"
]
}
]
},
{
"name" : "set vaccination",
"source" : [
{
"context" : "evidence"
}
],
"target" : [
{
"context" : "ddcc",
"contextType" : "variable",
"element" : "vaccination",
"variable" : "vaccination"
}
],
"dependent" : [
{
"name" : "EvidencetoCoreDataSetVS",
"variable" : [
"evidence",
"vaccination"
]
}
]
},
{
"name" : "set outentry",
"source" : [
{
"context" : "evidence"
}
],
"target" : [
{
"context" : "outentry",
"contextType" : "variable",
"element" : "resource",
"transform" : "copy",
"parameter" : [
{
"valueId" : "ddcc"
}
]
}
]
}
]
}
]
},
{
"name" : "ProofOfTestCertificateCredential",
"source" : [
{
"context" : "type",
"condition" : "type = 'ProofOfTestCertificateCredential'"
}
],
"rule" : [
{
"name" : "evidence",
"source" : [
{
"context" : "src",
"element" : "evidence",
"variable" : "evidence"
}
],
"target" : [
{
"context" : "ddccBundle",
"contextType" : "variable",
"element" : "entry",
"variable" : "outentry"
},
{
"contextType" : "variable",
"variable" : "ddcc",
"transform" : "create",
"parameter" : [
{
"valueString" : "http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetTR"
}
]
}
],
"rule" : [
{
"name" : "set patient",
"source" : [
{
"context" : "src",
"element" : "credentialSubject",
"variable" : "credentialSubject"
}
],
"dependent" : [
{
"name" : "CredentialSubjecttoCoreDataSet",
"variable" : [
"credentialSubject",
"ddcc"
]
}
]
},
{
"name" : "set certificate",
"source" : [
{
"context" : "src"
}
],
"target" : [
{
"context" : "ddcc",
"contextType" : "variable",
"element" : "certificate",
"variable" : "certificate"
}
],
"dependent" : [
{
"name" : "CertDIVOCtoCoreDataSetCertificate",
"variable" : [
"src",
"evidence",
"certificate"
]
}
]
},
{
"name" : "set test",
"source" : [
{
"context" : "evidence"
}
],
"target" : [
{
"context" : "ddcc",
"contextType" : "variable",
"element" : "test",
"variable" : "test"
}
],
"dependent" : [
{
"name" : "EvidencetoCoreDataSetTR",
"variable" : [
"evidence",
"test"
]
}
]
},
{
"name" : "set outentry",
"source" : [
{
"context" : "evidence"
}
],
"target" : [
{
"context" : "outentry",
"contextType" : "variable",
"element" : "resource",
"transform" : "copy",
"parameter" : [
{
"valueId" : "ddcc"
}
]
}
]
}
]
}
]
}
]
}
]
},
{
"name" : "CredentialSubjecttoCoreDataSet",
"typeMode" : "none",
"input" : [
{
"name" : "credentialSubject",
"mode" : "source"
},
{
"name" : "ddcc",
"type" : "DDCC",
"mode" : "target"
}
],
"rule" : [
{
"name" : "set name",
"source" : [
{
"context" : "credentialSubject",
"element" : "name",
"variable" : "name"
}
],
"target" : [
{
"context" : "ddcc",
"contextType" : "variable",
"element" : "name",
"transform" : "copy",
"parameter" : [
{
"valueId" : "name"
}
]
}
]
},
{
"name" : "set birthDate",
"source" : [
{
"context" : "credentialSubject",
"element" : "dob",
"variable" : "birthDate"
}
],
"target" : [
{
"context" : "ddcc",
"contextType" : "variable",
"element" : "birthDate",
"transform" : "copy",
"parameter" : [
{
"valueId" : "birthDate"
}
]
}
]
},
{
"name" : "identifier",
"source" : [
{
"context" : "credentialSubject",
"element" : "id",
"variable" : "id"
}
],
"target" : [
{
"contextType" : "variable",
"variable" : "identifier",
"transform" : "create",
"parameter" : [
{
"valueString" : "Identifier"
}
]
},
{
"context" : "identifier",
"contextType" : "variable",
"element" : "value",
"transform" : "copy",
"parameter" : [
{
"valueId" : "id"
}
]
}
],
"rule" : [
{
"name" : "set identifier",
"source" : [
{
"context" : "id"
}
],
"target" : [
{
"context" : "ddcc",
"contextType" : "variable",
"element" : "identifier",
"transform" : "copy",
"parameter" : [
{
"valueId" : "identifier"
}
]
}
]
}
]
}
]
},
{
"name" : "CertDIVOCtoCoreDataSetCertificate",
"typeMode" : "none",
"input" : [
{
"name" : "src",
"type" : "DIVOC",
"mode" : "source"
},
{
"name" : "evidence",
"mode" : "source"
},
{
"name" : "certificate",
"mode" : "target"
}
],
"rule" : [
{
"name" : "set hcid",
"source" : [
{
"context" : "evidence",
"element" : "certificateId",
"variable" : "certificateId"
}
],
"target" : [
{
"context" : "certificate",
"contextType" : "variable",
"element" : "hcid",
"variable" : "hcid"
},
{
"context" : "hcid",
"contextType" : "variable",
"element" : "value",
"transform" : "copy",
"parameter" : [
{
"valueId" : "certificateId"
}
]
}
]
},
{
"name" : "context",
"source" : [
{
"context" : "src",
"element" : "context",
"variable" : "context"
}
],
"rule" : [
{
"name" : "set version",
"source" : [
{
"context" : "context",
"condition" : "(context.contains('cowin.gov.in'))"
}
],
"target" : [
{
"context" : "certificate",
"contextType" : "variable",
"element" : "version",
"transform" : "copy",
"parameter" : [
{
"valueId" : "context"
}
]
}
]
}
]
},
{
"name" : "period",
"source" : [
{
"context" : "evidence"
}
],
"target" : [
{
"context" : "certificate",
"contextType" : "variable",
"element" : "period",
"variable" : "period",
"transform" : "create",
"parameter" : [
{
"valueString" : "Period"
}
]
}
],
"rule" : [
{
"name" : "set period start",
"source" : [
{
"context" : "evidence",
"element" : "effectiveStart",
"variable" : "effectiveStart"
}
],
"target" : [
{
"context" : "period",
"contextType" : "variable",
"element" : "start",
"transform" : "copy",
"parameter" : [
{
"valueId" : "effectiveStart"
}
]
}
]
},
{
"name" : "set period end",
"source" : [
{
"context" : "evidence",
"element" : "effectiveUntil",
"variable" : "effectiveUntil"
}
],
"target" : [
{
"context" : "period",
"contextType" : "variable",
"element" : "end",
"transform" : "copy",
"parameter" : [
{
"valueId" : "effectiveUntil"
}
]
}
]
}
]
},
{
"name" : "set issuer",
"source" : [
{
"context" : "src",
"element" : "issuer",
"variable" : "issuer"
}
],
"target" : [
{
"context" : "certificate",
"contextType" : "variable",
"element" : "issuer",
"variable" : "issuer",
"transform" : "create",
"parameter" : [
{
"valueString" : "Reference"
}
]
},
{
"context" : "issuer",
"contextType" : "variable",
"element" : "display",
"transform" : "copy",
"parameter" : [
{
"valueId" : "issuer"
}
]
}
]
}
]
},
{
"name" : "EvidencetoCoreDataSetVS",
"typeMode" : "none",
"input" : [
{
"name" : "evidence",
"mode" : "source"
},
{
"name" : "vaccination",
"mode" : "target"
}
],
"rule" : [
{
"name" : "set vaccine",
"source" : [
{
"context" : "evidence",
"element" : "icd11Code",
"variable" : "icd11Code"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "vaccine",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "system",
"transform" : "copy",
"parameter" : [
{
"valueString" : "http://id.who.int/icd11/mms"
}
]
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "icd11Code"
}
]
}
]
},
{
"name" : "set brand",
"source" : [
{
"context" : "evidence",
"element" : "vaccine",
"variable" : "vaccine"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "brand",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "vaccine"
}
]
}
]
},
{
"name" : "set manufacturer",
"source" : [
{
"context" : "evidence",
"element" : "manufacturer",
"variable" : "manufacturer"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "manufacturer",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "manufacturer"
}
]
}
]
},
{
"name" : "set lot",
"source" : [
{
"context" : "evidence",
"element" : "batch",
"variable" : "batch"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "lot",
"transform" : "copy",
"parameter" : [
{
"valueId" : "batch"
}
]
}
]
},
{
"name" : "set date",
"source" : [
{
"context" : "evidence",
"element" : "date",
"variable" : "date"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "date",
"transform" : "copy",
"parameter" : [
{
"valueId" : "date"
}
]
}
]
},
{
"name" : "set dose",
"source" : [
{
"context" : "evidence",
"element" : "dose",
"variable" : "dose"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "dose",
"transform" : "copy",
"parameter" : [
{
"valueId" : "dose"
}
]
}
]
},
{
"name" : "set totalDoses",
"source" : [
{
"context" : "evidence",
"element" : "totalDoses",
"variable" : "totalDoses"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "totalDoses",
"transform" : "copy",
"parameter" : [
{
"valueId" : "totalDoses"
}
]
}
]
},
{
"name" : "facility",
"source" : [
{
"context" : "evidence",
"element" : "facility",
"variable" : "facility"
}
],
"rule" : [
{
"name" : "address",
"source" : [
{
"context" : "facility",
"element" : "address",
"variable" : "address"
}
],
"rule" : [
{
"name" : "set country",
"source" : [
{
"context" : "address",
"element" : "addressCountry",
"variable" : "addressCountry"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "country",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "system",
"transform" : "copy",
"parameter" : [
{
"valueString" : "urn:iso:std:iso:3166"
}
]
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "addressCountry"
}
]
}
]
}
]
},
{
"name" : "set centre",
"source" : [
{
"context" : "facility",
"element" : "name",
"variable" : "name"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "centre",
"transform" : "copy",
"parameter" : [
{
"valueId" : "name"
}
]
}
]
}
]
},
{
"name" : "verifier",
"source" : [
{
"context" : "evidence",
"element" : "verifier",
"variable" : "verifier"
}
],
"rule" : [
{
"name" : "set practitioner",
"source" : [
{
"context" : "verifier",
"element" : "name",
"variable" : "name"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "practitioner",
"variable" : "practitioner"
},
{
"context" : "practitioner",
"contextType" : "variable",
"element" : "value",
"transform" : "copy",
"parameter" : [
{
"valueId" : "name"
}
]
}
]
}
]
}
]
},
{
"name" : "EvidencetoCoreDataSetTR",
"typeMode" : "none",
"input" : [
{
"name" : "evidence",
"mode" : "source"
},
{
"name" : "test",
"mode" : "target"
}
],
"rule" : [
{
"name" : "disease",
"source" : [
{
"context" : "evidence",
"element" : "disease",
"variable" : "disease"
}
],
"rule" : [
{
"name" : "set COVID19 pathogen",
"source" : [
{
"context" : "disease",
"condition" : "disease = 'COVID-19'"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "pathogen",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "system",
"transform" : "copy",
"parameter" : [
{
"valueString" : "http://id.who.int/icd11/mms"
}
]
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueString" : "XN109"
}
]
}
]
},
{
"name" : "set other pathogen",
"source" : [
{
"context" : "disease",
"condition" : "(disease = 'COVID-19').not()"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "pathogen",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "disease"
}
]
}
]
}
]
},
{
"name" : "testType",
"source" : [
{
"context" : "evidence",
"element" : "testType",
"variable" : "testType"
}
],
"rule" : [
{
"name" : "set default type",
"source" : [
{
"context" : "testType"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "type",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "testType"
}
]
}
]
},
{
"name" : "coding",
"source" : [
{
"context" : "testType"
}
],
"target" : [
{
"contextType" : "variable",
"variable" : "coded",
"transform" : "c",
"parameter" : [
{
"valueString" : "http://smart.who.int/ddcc/CodeSystem/lab-test-type-divoc"
},
{
"valueId" : "testType"
}
]
}
],
"rule" : [
{
"name" : "translate DIVOC type",
"source" : [
{
"context" : "testType",
"condition" : "coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-divoc')"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "type",
"transform" : "translate",
"parameter" : [
{
"valueId" : "coded"
},
{
"valueString" : "http://smart.who.int/ddcc/ConceptMap/lab-test-type-divoc-to-icd11"
},
{
"valueString" : "Coding"
}
]
}
]
}
]
}
]
},
{
"name" : "sampleOrigin",
"source" : [
{
"context" : "evidence",
"element" : "sampleOrigin",
"variable" : "sampleOrigin"
}
],
"rule" : [
{
"name" : "set default origin",
"source" : [
{
"context" : "sampleOrigin"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "origin",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "sampleOrigin"
}
]
}
]
},
{
"name" : "coding",
"source" : [
{
"context" : "sampleOrigin"
}
],
"target" : [
{
"contextType" : "variable",
"variable" : "coded",
"transform" : "c",
"parameter" : [
{
"valueString" : "http://smart.who.int/ddcc/CodeSystem/lab-test-sample-origin-divoc"
},
{
"valueId" : "sampleOrigin"
}
]
}
],
"rule" : [
{
"name" : "translate DIVOC origin",
"source" : [
{
"context" : "sampleOrigin",
"condition" : "coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-sample-origin-divoc')"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "origin",
"transform" : "translate",
"parameter" : [
{
"valueId" : "coded"
},
{
"valueString" : "http://smart.who.int/ddcc/ConceptMap/lab-test-sample-origin-divoc-to-icd11"
},
{
"valueString" : "Coding"
}
]
}
]
}
]
}
]
},
{
"name" : "result",
"source" : [
{
"context" : "evidence",
"element" : "result",
"variable" : "result"
}
],
"rule" : [
{
"name" : "set default result",
"source" : [
{
"context" : "result"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "result",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "result"
}
]
}
]
},
{
"name" : "coded",
"source" : [
{
"context" : "result"
}
],
"target" : [
{
"contextType" : "variable",
"variable" : "coded",
"transform" : "c",
"parameter" : [
{
"valueString" : "http://smart.who.int/ddcc/CodeSystem/lab-test-qual-result-divoc"
},
{
"valueId" : "result"
}
]
}
],
"rule" : [
{
"name" : "translate DIVOC result",
"source" : [
{
"context" : "result",
"condition" : "coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-qual-result-divoc')"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "result",
"transform" : "translate",
"parameter" : [
{
"valueId" : "coded"
},
{
"valueString" : "http://smart.who.int/ddcc/ConceptMap/lab-test-qual-result-divoc-to-icd11"
},
{
"valueString" : "Coding"
}
]
}
]
}
]
}
]
},
{
"name" : "set date",
"source" : [
{
"context" : "evidence",
"element" : "sampleCollectionTimestamp",
"variable" : "date"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "date",
"transform" : "copy",
"parameter" : [
{
"valueId" : "date"
}
]
}
]
},
{
"name" : "set brand",
"source" : [
{
"context" : "evidence",
"element" : "testName",
"variable" : "testName"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "brand",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "testName"
}
]
}
]
},
{
"name" : "set manufacturer",
"source" : [
{
"context" : "evidence",
"element" : "manufacturer",
"variable" : "manufacturer"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "manufacturer",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "manufacturer"
}
]
}
]
},
{
"name" : "facility",
"source" : [
{
"context" : "evidence",
"element" : "facility",
"variable" : "facility"
}
],
"rule" : [
{
"name" : "address",
"source" : [
{
"context" : "facility",
"element" : "address",
"variable" : "address"
}
],
"rule" : [
{
"name" : "set country",
"source" : [
{
"context" : "address",
"element" : "addressCountry",
"variable" : "addressCountry"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "country",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "system",
"transform" : "copy",
"parameter" : [
{
"valueString" : "urn:iso:std:iso:3166"
}
]
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "addressCountry"
}
]
}
]
}
]
},
{
"name" : "set centre",
"source" : [
{
"context" : "facility",
"element" : "name",
"variable" : "name"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "centre",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "name"
}
]
}
]
}
]
}
]
}
]
}
XIG built as of ??metadata-date??. Found ??metadata-resources?? resources in ??metadata-packages?? packages.