FHIR IG analytics| Package | us.nlm.vsac |
| Resource Type | ValueSet |
| Id | ValueSet-2.16.840.1.113762.1.4.1146.994.json |
| FHIR Version | R4 |
| Source | https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.994/expansion |
| URL | http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.994 |
| Version | 20230125 |
| Status | active |
| Date | 2023-01-25T01:08:07-05:00 |
| Name | OrganismsTestsForNucleicAcid |
| Title | Organisms (Tests for Nucleic Acid) |
| Realm | us |
| Authority | hl7 |
| Purpose | (Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the Nucleic Acid of non-specific organisms.),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: LOINC search: "(microorganism or pathogens) nucleic acid -panel" plus "41852-5 Microorganism or agent identified in Unspecified specimen"),(Exclusion Criteria: panel test) |
No resources found
| CodeSystem | |
| loinc.org | LOINC codes used in this IG |
No narrative content found in resource
FHIR
FHIRsmith{
"resourceType": "ValueSet",
"id": "2.16.840.1.113762.1.4.1146.994",
"meta": {
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"lastUpdated": "2023-12-21T17:43:03.000-05:00",
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"valueContactDetail": {
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{
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"valueString": "G_Common"
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{
"url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
"valueDate": "2024-06-05"
},
{
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"valueDate": "2023-01-25"
}
],
"url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.994",
"identifier": [
{
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"version": "20230125",
"name": "OrganismsTestsForNucleicAcid",
"title": "Organisms (Tests for Nucleic Acid)",
"status": "active",
"date": "2023-01-25T01:08:07-05:00",
"publisher": "CSTE Steward",
"jurisdiction": [
{
"coding": [
{
"system": "urn:iso:std:iso:3166",
"code": "US"
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]
}
],
"purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the Nucleic Acid of non-specific organisms.),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: LOINC search: \"(microorganism or pathogens) nucleic acid -panel\" plus \"41852-5 Microorganism or agent identified in Unspecified specimen\"),(Exclusion Criteria: panel test)",
"compose": {
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"display": "XXX microorganism DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "38347-1",
"display": "XXX microorganism DNA [Identifier] in Specimen by NAA with probe detection"
},
{
"code": "40971-4",
"display": "XXX microorganism DNA [Presence] in Urine by NAA with probe detection"
},
{
"code": "40972-2",
"display": "XXX microorganism DNA [Presence] in Serum or Plasma by NAA with probe detection"
},
{
"code": "62201-9",
"display": "XXX microorganism DNA [Identifier] in Serum or Plasma by NAA with probe detection"
},
{
"code": "66885-5",
"display": "Bacteria identified based on 16S rRNA gene [Identifier] in Specimen by Sequencing"
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{
"code": "79390-1",
"display": "Gastrointestinal pathogens identified in Stool by NAA with probe detection"
},
{
"code": "80602-6",
"display": "Respiratory pathogens identified [Type] in Nasopharynx by NAA with probe detection"
},
{
"code": "81655-3",
"display": "Respiratory pathogens DNA and RNA identified in Respiratory specimen by NAA with probe detection"
},
{
"code": "82125-6",
"display": "Respiratory pathogens DNA and RNA tested for in Pleural fluid by NAA with probe detection"
},
{
"code": "82127-2",
"display": "Respiratory pathogens DNA and RNA identified in Pleural fluid by NAA with probe detection"
},
{
"code": "82134-8",
"display": "Respiratory pathogens DNA and RNA tested for in Respiratory specimen by NAA with probe detection"
},
{
"code": "88516-0",
"display": "Gastrointestinal pathogens identified in Specimen by NAA with probe detection"
},
{
"code": "92249-2",
"display": "Microorganism gene tested for [Identifier] by Molecular method"
},
{
"code": "92251-8",
"display": "Microorganism gene detected [Presence] by Molecular method"
},
{
"code": "92253-4",
"display": "Microorganism identified in Isolate or Specimen by Molecular genetics method"
}
]
}
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},
"expansion": {
"identifier": "urn:uuid:254bc495-45c5-46c4-a213-c7975d85f620",
"timestamp": "2025-05-23T18:57:00-04:00",
"total": 16,
"contains": [
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"code": "35691-5",
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"code": "40972-2",
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{
"system": "http://loinc.org",
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"display": "Respiratory pathogens DNA and RNA [Identifier] in Pleural fluid by NAA with probe detection"
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{
"system": "http://loinc.org",
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"code": "82134-8",
"display": "Respiratory pathogens DNA and RNA tested for in Respiratory system specimen by NAA with probe detection"
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"system": "http://loinc.org",
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"system": "http://loinc.org",
"version": "2.80",
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"display": "Microorganism gene detected [Presence] by Molecular method"
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"system": "http://loinc.org",
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}