FHIR IG analytics| Package | us.nlm.vsac |
| Resource Type | ValueSet |
| Id | ValueSet-2.16.840.1.113762.1.4.1146.989.json |
| FHIR Version | R4 |
| Source | https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.989/expansion |
| URL | http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.989 |
| Version | 20250219 |
| Status | active |
| Date | 2025-02-19T01:09:45-05:00 |
| Name | TestsForMycobacteriumSpeciesByCultureAndIdentificationMethod |
| Title | Tests for Mycobacterium species by Culture and Identification Method |
| Realm | us |
| Authority | hl7 |
| Purpose | (Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of Mycobacterium species in culture.),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: component: Mycobacterium culture and isolate; LOINC Search terms: ‘mycobacterium culture -dialysis’ and ‘mycobacterium isolate -panel’),(Exclusion Criteria: Mycobacterium tuberculosis) |
No resources found
| CodeSystem | |
| loinc.org | LOINC codes used in this IG |
No narrative content found in resource
{
"resourceType": "ValueSet",
"id": "2.16.840.1.113762.1.4.1146.989",
"meta": {
"versionId": "42",
"lastUpdated": "2025-02-19T01:09:45.000-05:00",
"profile": [
"http://hl7.org/fhir/StructureDefinition/shareablevalueset",
"http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
"http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm"
]
},
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
"valueContactDetail": {
"name": "CSTE Author"
}
},
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
"valueString": "G_Common"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
"valueDate": "2025-02-19"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
"valueDate": "2025-02-19"
}
],
"url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.989",
"identifier": [
{
"system": "urn:ietf:rfc:3986",
"value": "urn:oid:2.16.840.1.113762.1.4.1146.989"
}
],
"version": "20250219",
"name": "TestsForMycobacteriumSpeciesByCultureAndIdentificationMethod",
"title": "Tests for Mycobacterium species by Culture and Identification Method",
"status": "active",
"date": "2025-02-19T01:09:45-05:00",
"publisher": "CSTE Steward",
"jurisdiction": [
{
"coding": [
{
"system": "urn:iso:std:iso:3166",
"code": "US"
}
]
}
],
"purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of Mycobacterium species in culture.),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: component: Mycobacterium culture and isolate; \n\nLOINC Search terms: ‘mycobacterium culture -dialysis’ and ‘mycobacterium isolate -panel’),(Exclusion Criteria: Mycobacterium tuberculosis)",
"compose": {
"include": [
{
"system": "http://loinc.org",
"concept": [
{
"code": "105224-0",
"display": "Mycobacterium sp identified in Pericardial fluid by Organism specific culture"
},
{
"code": "105225-7",
"display": "Mycobacterium sp identified in Pus by Organism specific culture"
},
{
"code": "105926-0",
"display": "Mycobacterium sp identified in Stool by Organism specific culture"
},
{
"code": "20892-6",
"display": "Mycobacterium avium ss paratuberculosis [Presence] in Tissue by Organism specific culture"
},
{
"code": "20893-4",
"display": "Mycobacterium avium ss paratuberculosis [Presence] in Stool by Organism specific culture"
},
{
"code": "24427-7",
"display": "Mycobacterium avium ss paratuberculosis [Presence] in Specimen by Organism specific culture"
},
{
"code": "30045-9",
"display": "Mycobacterium sp identified in Dialysis fluid by Organism specific culture"
},
{
"code": "42716-1",
"display": "Mycobacterium sp rRNA [Identifier] in Isolate by NAA with probe detection"
},
{
"code": "44851-4",
"display": "Mycobacterium sp # 2 identified in Specimen by Organism specific culture"
},
{
"code": "44852-2",
"display": "Mycobacterium sp # 3 identified in Specimen by Organism specific culture"
},
{
"code": "44854-8",
"display": "Mycobacterium sp # 4 identified in Specimen by Organism specific culture"
},
{
"code": "44855-5",
"display": "Mycobacterium sp # 5 identified in Specimen by Organism specific culture"
},
{
"code": "50941-4",
"display": "Mycobacterium sp [Presence] in Specimen by Organism specific culture"
},
{
"code": "532-2",
"display": "Mycobacterium sp identified in Aspirate by Organism specific culture"
},
{
"code": "533-0",
"display": "Mycobacterium sp identified in Blood by Organism specific culture"
},
{
"code": "534-8",
"display": "Mycobacterium sp identified in Cerebral spinal fluid by Organism specific culture"
},
{
"code": "535-5",
"display": "Mycobacterium sp identified in Body fluid by Organism specific culture"
},
{
"code": "536-3",
"display": "Mycobacterium sp identified in Bone marrow by Organism specific culture"
},
{
"code": "537-1",
"display": "Mycobacterium sp identified in Peritoneal fluid by Organism specific culture"
},
{
"code": "538-9",
"display": "Mycobacterium sp identified in Synovial fluid by Organism specific culture"
},
{
"code": "539-7",
"display": "Mycobacterium sp identified in Sputum by Organism specific culture"
},
{
"code": "53909-8",
"display": "Mycobacterium sp identified in Pleural fluid by Organism specific culture"
},
{
"code": "540-5",
"display": "Mycobacterium sp identified in Tissue by Organism specific culture"
},
{
"code": "541-3",
"display": "Mycobacterium sp identified in Urine by Organism specific culture"
},
{
"code": "542-1",
"display": "Mycobacterium sp identified in Wound by Organism specific culture"
},
{
"code": "543-9",
"display": "Mycobacterium sp identified in Specimen by Organism specific culture"
},
{
"code": "614-8",
"display": "Mycobacterial strain [Type] in Isolate by Mycobacterial subtyping"
},
{
"code": "64412-0",
"display": "Mycobacterium sp [Presence] in Blood by Organism specific culture"
},
{
"code": "67725-2",
"display": "Mycobacterium sp identified in Isolate by HPLC"
},
{
"code": "76687-3",
"display": "Mycobacterium sp identified in Bronchoalveolar lavage by Organism specific culture"
},
{
"code": "88167-2",
"display": "Mycobacterium sp identified in Cornea or Conjunctiva by Organism specific culture"
},
{
"code": "88168-0",
"display": "Mycobacterium sp identified in Ocular fluid by Organism specific culture"
},
{
"code": "88183-9",
"display": "Mycobacterium sp identified in Isolate by Sequencing"
},
{
"code": "88266-2",
"display": "Mycobacterium sp rRNA [Identifier] by Probe in Positive blood culture"
},
{
"code": "89636-5",
"display": "Mycobacterium sp identified in Lower respiratory specimen by Organism specific culture"
},
{
"code": "89637-3",
"display": "Mycobacterium sp identified in Implanted device by Organism specific culture"
},
{
"code": "90284-1",
"display": "Mycobacterium sp identified in Bile fluid by Organism specific culture"
},
{
"code": "90306-2",
"display": "Mycobacterium sp identified in Specimen by Sequencing"
},
{
"code": "90433-4",
"display": "Mycobacterium preliminary growth [Presence] in Sputum by Organism specific culture"
},
{
"code": "90438-3",
"display": "Mycobacterium preliminary growth [Presence] in Tissue by Organism specific culture"
},
{
"code": "91590-0",
"display": "Mycobacterium preliminary growth [Presence] in Body fluid by Organism specific culture"
},
{
"code": "97758-7",
"display": "Fungus and Mycobacterium sp identified in Blood by Organism specific culture"
},
{
"code": "9823-6",
"display": "Mycobacterium sp identified in Bronchial specimen by Organism specific culture"
},
{
"code": "9824-4",
"display": "Mycobacterium sp identified in Gastric fluid by Organism specific culture"
},
{
"code": "9825-1",
"display": "Mycobacterium sp identified in Isolate"
}
]
}
]
},
"expansion": {
"identifier": "urn:uuid:a7f308db-2fcd-4744-8be7-1176a5a1e370",
"timestamp": "2025-05-23T18:56:57-04:00",
"total": 45,
"contains": [
{
"system": "http://loinc.org",
"version": "2.80",
"code": "105224-0",
"display": "Mycobacterium sp identified in Pericardial fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "105225-7",
"display": "Mycobacterium sp identified in Pus by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "105926-0",
"display": "Mycobacterium sp identified in Stool by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "20892-6",
"display": "Mycobacterium avium ss paratuberculosis [Presence] in Tissue by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "20893-4",
"display": "Mycobacterium avium ss paratuberculosis [Presence] in Stool by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "24427-7",
"display": "Mycobacterium avium ss paratuberculosis [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "30045-9",
"display": "Mycobacterium sp identified in Dialysis fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "42716-1",
"display": "Mycobacterium sp rRNA [Identifier] in Isolate by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "44851-4",
"display": "Mycobacterium sp # 2 identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "44852-2",
"display": "Mycobacterium sp # 3 identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "44854-8",
"display": "Mycobacterium sp # 4 identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "44855-5",
"display": "Mycobacterium sp # 5 identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "50941-4",
"display": "Mycobacterium sp [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "532-2",
"display": "Mycobacterium sp identified in Aspirate by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "533-0",
"display": "Mycobacterium sp identified in Blood by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "534-8",
"display": "Mycobacterium sp identified in Cerebral spinal fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "535-5",
"display": "Mycobacterium sp identified in Body fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "536-3",
"display": "Mycobacterium sp identified in Bone marrow by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "537-1",
"display": "Mycobacterium sp identified in Peritoneal fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "538-9",
"display": "Mycobacterium sp identified in Synovial fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "539-7",
"display": "Mycobacterium sp identified in Sputum by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "53909-8",
"display": "Mycobacterium sp identified in Pleural fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "540-5",
"display": "Mycobacterium sp identified in Tissue by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "541-3",
"display": "Mycobacterium sp identified in Urine by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "542-1",
"display": "Mycobacterium sp identified in Wound by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "543-9",
"display": "Mycobacterium sp identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "614-8",
"display": "Mycobacterial strain [Type] in Isolate by Mycobacterial subtyping"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "64412-0",
"display": "Mycobacterium sp [Presence] in Blood by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "67725-2",
"display": "Mycobacterium sp identified in Isolate by HPLC"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "76687-3",
"display": "Mycobacterium sp identified in Bronchoalveolar lavage by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88167-2",
"display": "Mycobacterium sp identified in Cornea or Conjunctiva by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88168-0",
"display": "Mycobacterium sp identified in Ocular fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88183-9",
"display": "Mycobacterium sp identified in Isolate by Sequencing"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88266-2",
"display": "Mycobacterium sp rRNA [Identifier] by Probe in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "89636-5",
"display": "Mycobacterium sp identified in Lower respiratory specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "89637-3",
"display": "Mycobacterium sp identified in Implanted device by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "90284-1",
"display": "Mycobacterium sp identified in Bile fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "90306-2",
"display": "Mycobacterium sp identified in Specimen by Sequencing"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "90433-4",
"display": "Mycobacterium preliminary growth [Presence] in Sputum by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "90438-3",
"display": "Mycobacterium preliminary growth [Presence] in Tissue by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "91590-0",
"display": "Mycobacterium preliminary growth [Presence] in Body fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "97758-7",
"display": "Fungus and Mycobacterium sp identified in Blood by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "9823-6",
"display": "Mycobacterium sp identified in Bronchial specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "9824-4",
"display": "Mycobacterium sp identified in Gastric fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "9825-1",
"display": "Mycobacterium sp identified in Isolate"
}
]
}
}