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Packageus.nlm.vsac
Resource TypeValueSet
IdValueSet-2.16.840.1.113762.1.4.1146.388.json
FHIR VersionR4
Sourcehttps://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.388/expansion
URLhttp://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.388
Version20250218
Statusactive
Date2025-02-18T01:09:31-05:00
NameVibriosisTestsForVibrionaceaeSpeciesExceptToxigenicVibrioCholeraO1AndO139NucleicAcid
TitleVibriosis (Tests for Vibrionaceae species [except Toxigenic Vibrio cholera O1 and O139] Nucleic Acid)
Realmus
Authorityhl7
Purpose(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting nucleic acid of Vibrionaceae species (except Toxigenic Vibrio cholera O1 and O139)),(Data Element Scope: Laboratory tests names that were ordered or performed.),(Inclusion Criteria: Vibrio species nucleic acid; LOINC search: “(vibrio or Grimontia or Photobacterium) nucleic -cholerae”),(Exclusion Criteria: LOINCs for Vibrio cholerae)

Resources that use this resource

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Resources that this resource uses

CodeSystem
loinc.orgLOINC codes used in this IG

Narrative

No narrative content found in resource


Source1

{
  "resourceType": "ValueSet",
  "id": "2.16.840.1.113762.1.4.1146.388",
  "meta": {
    "versionId": "42",
    "lastUpdated": "2025-02-18T01:09:30.000-05:00",
    "profile": [
      "http://hl7.org/fhir/StructureDefinition/shareablevalueset",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm"
    ]
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
      "valueContactDetail": {
        "name": "CSTE Author"
      }
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
      "valueString": "G_Enteric,Trigger,Vibriosis"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
      "valueDate": "2025-02-18"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
      "valueDate": "2025-02-18"
    }
  ],
  "url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.388",
  "identifier": [
    {
      "system": "urn:ietf:rfc:3986",
      "value": "urn:oid:2.16.840.1.113762.1.4.1146.388"
    }
  ],
  "version": "20250218",
  "name": "VibriosisTestsForVibrionaceaeSpeciesExceptToxigenicVibrioCholeraO1AndO139NucleicAcid",
  "title": "Vibriosis (Tests for Vibrionaceae species [except Toxigenic Vibrio cholera O1 and O139] Nucleic Acid)",
  "status": "active",
  "date": "2025-02-18T01:09:31-05:00",
  "publisher": "CSTE Steward",
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "urn:iso:std:iso:3166",
          "code": "US"
        }
      ]
    }
  ],
  "purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting nucleic acid of Vibrionaceae species (except Toxigenic Vibrio cholera O1 and O139)),(Data Element Scope: Laboratory tests names that were ordered or performed.),(Inclusion Criteria: Vibrio species nucleic acid;  \n\nLOINC search: “(vibrio or Grimontia or Photobacterium) nucleic -cholerae”),(Exclusion Criteria: LOINCs for Vibrio cholerae)",
  "compose": {
    "include": [
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        "system": "http://loinc.org",
        "concept": [
          {
            "code": "103200-2",
            "display": "Vibrio cholerae+parahaemolyticus+vulnificus DNA [Presence] in Wound by NAA with probe detection"
          },
          {
            "code": "105891-6",
            "display": "Vibrio cholerae+parahaemolyticus+vulnificus DNA [Presence] in Specimen"
          },
          {
            "code": "41857-4",
            "display": "Vibrio parahaemolyticus DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "49609-1",
            "display": "Vibrio sp DNA [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code": "79384-4",
            "display": "Vibrio cholerae+parahaemolyticus rfbL+trkH+tnaA genes [Presence] in Stool by NAA with probe detection"
          },
          {
            "code": "82200-7",
            "display": "Vibrio cholerae+parahaemolyticus+vulnificus DNA [Presence] in Stool by NAA with non-probe detection"
          },
          {
            "code": "92686-5",
            "display": "Vibrio cholerae+parahaemolyticus+vulnificus DNA [Presence] in Stool by NAA with probe detection"
          },
          {
            "code": "96963-4",
            "display": "Grimontia holisae and Vibrio fluvialis and Vibrio harveyi DNA [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code": "97315-6",
            "display": "Vibrio parahaemolyticus DNA [Presence] in Stool by NAA with probe detection"
          },
          {
            "code": "97316-4",
            "display": "Vibrio vulnificus DNA [Presence] in Stool by NAA with probe detection"
          }
        ]
      }
    ]
  },
  "expansion": {
    "identifier": "urn:uuid:279efc2f-593d-4881-9bc5-3c3aef1e6f95",
    "timestamp": "2025-05-23T18:50:23-04:00",
    "total": 10,
    "contains": [
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "103200-2",
        "display": "Vibrio cholerae+parahaemolyticus+vulnificus DNA [Presence] in Wound by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "105891-6",
        "display": "Vibrio cholerae+parahaemolyticus+vulnificus DNA [Presence] in Specimen"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "41857-4",
        "display": "Vibrio parahaemolyticus DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "49609-1",
        "display": "Vibrio sp DNA [Identifier] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "79384-4",
        "display": "Vibrio cholerae+parahaemolyticus rfbL+trkH+tnaA genes [Presence] in Stool by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "82200-7",
        "display": "Vibrio cholerae+parahaemolyticus+vulnificus DNA [Presence] in Stool by NAA with non-probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92686-5",
        "display": "Vibrio cholerae+parahaemolyticus+vulnificus DNA [Presence] in Stool by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "96963-4",
        "display": "Grimontia holisae and Vibrio fluvialis and Vibrio harveyi DNA [Identifier] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "97315-6",
        "display": "Vibrio parahaemolyticus DNA [Presence] in Stool by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "97316-4",
        "display": "Vibrio vulnificus DNA [Presence] in Stool by NAA with probe detection"
      }
    ]
  }
}