FHIR IG analytics| Package | us.nlm.vsac |
| Resource Type | ValueSet |
| Id | ValueSet-2.16.840.1.113762.1.4.1146.308.json |
| FHIR Version | R4 |
| Source | https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.308/expansion |
| URL | http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.308 |
| Version | 20230602 |
| Status | active |
| Date | 2023-06-02T01:03:51-04:00 |
| Name | InvasivePneumococcalDiseaseTestsForStreptococcusPneumoniaeNucleicAcid |
| Title | Invasive Pneumococcal Disease (Tests for Streptococcus pneumoniae Nucleic Acid) |
| Realm | us |
| Authority | hl7 |
| Purpose | (Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of Streptococcus pneumoniae nucleic acid),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: VSAC query: streptococcus pneumoniae probe/non-probe; LOINC search: 'Streptococcus pneumoniae nucleic acid -culture'),(Exclusion Criteria: none) |
No resources found
| CodeSystem | |
| loinc.org | LOINC codes used in this IG |
No narrative content found in resource
FHIR
FHIRsmith{
"resourceType": "ValueSet",
"id": "2.16.840.1.113762.1.4.1146.308",
"meta": {
"versionId": "40",
"lastUpdated": "2023-12-21T17:43:03.000-05:00",
"profile": [
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"http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
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]
},
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
"valueContactDetail": {
"name": "CSTE Author"
}
},
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
"valueString": "G_Vaccine,Invasive_Pneumococcal_Disease,Trigger"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
"valueDate": "2024-06-05"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
"valueDate": "2023-06-02"
}
],
"url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.308",
"identifier": [
{
"system": "urn:ietf:rfc:3986",
"value": "urn:oid:2.16.840.1.113762.1.4.1146.308"
}
],
"version": "20230602",
"name": "InvasivePneumococcalDiseaseTestsForStreptococcusPneumoniaeNucleicAcid",
"title": "Invasive Pneumococcal Disease (Tests for Streptococcus pneumoniae Nucleic Acid)",
"status": "active",
"date": "2023-06-02T01:03:51-04:00",
"publisher": "CSTE Steward",
"jurisdiction": [
{
"coding": [
{
"system": "urn:iso:std:iso:3166",
"code": "US"
}
]
}
],
"purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of Streptococcus pneumoniae nucleic acid),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: VSAC query: streptococcus pneumoniae probe/non-probe; \n\nLOINC search: 'Streptococcus pneumoniae nucleic acid -culture'),(Exclusion Criteria: none)",
"compose": {
"include": [
{
"system": "http://loinc.org",
"concept": [
{
"code": "49672-9",
"display": "Streptococcus pneumoniae DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "5035-1",
"display": "Streptococcus pneumoniae rRNA [Presence] in Specimen by Probe"
},
{
"code": "51668-2",
"display": "Streptococcus pneumoniae DNA and Haemophilus influenza DNA and Pseudomonas aeruginosa DNA [Identifier] in Unspecified specimen by NAA with probe detection"
},
{
"code": "53917-1",
"display": "Streptococcus pneumoniae DNA [Presence] in Blood by NAA with probe detection"
},
{
"code": "62493-2",
"display": "Streptococcus pneumoniae DNA and Haemophilus influenza DNA and Streptococcus agalactiae DNA [Identifier] in Unspecified specimen by NAA with probe detection"
},
{
"code": "76572-7",
"display": "Streptococcus pneumoniae nanA gene [Presence] in Swab specimen by NAA with probe detection"
},
{
"code": "76587-5",
"display": "Streptococcus pneumoniae nanA gene [#/mass] in XXX.tissue by NAA with probe detection"
},
{
"code": "76600-6",
"display": "Streptococcus pneumoniae nanA gene [#/volume] in XXX.body fluid by NAA with probe detection"
},
{
"code": "82187-6",
"display": "Streptococcus pneumoniae DNA [Presence] in Cerebral spinal fluid by NAA with non-probe detection"
},
{
"code": "85496-8",
"display": "Streptococcus pneumoniae serotype [Identifier] in Specimen by NAA with probe detection"
},
{
"code": "85688-0",
"display": "Streptococcus pneumoniae lytA gene [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85740-9",
"display": "Streptococcus pneumoniae Danish serotype 5 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85741-7",
"display": "Streptococcus pneumoniae Danish serotype 4 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85742-5",
"display": "Streptococcus pneumoniae Danish serotype 3 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85743-3",
"display": "Streptococcus pneumoniae Danish serotype 23F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85744-1",
"display": "Streptococcus pneumoniae Danish serotype 2 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85745-8",
"display": "Streptococcus pneumoniae Danish serotype 19F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85746-6",
"display": "Streptococcus pneumoniae Danish serotype 14 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85747-4",
"display": "Streptococcus pneumoniae Danish serotype 1 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85748-2",
"display": "Streptococcus pneumoniae Danish serotypes 7A+7F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85749-0",
"display": "Streptococcus pneumoniae Danish serotypes 22A+22F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85750-8",
"display": "Streptococcus pneumoniae Danish serotype 23A DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85751-6",
"display": "Streptococcus pneumoniae Danish serotype 16F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85752-4",
"display": "Streptococcus pneumoniae Danish serotypes 9A+9V DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85753-2",
"display": "Streptococcus pneumoniae Danish serotypes 6C+6D DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85754-0",
"display": "Streptococcus pneumoniae Danish serotypes 6A+6B+6C+6D DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85755-7",
"display": "Streptococcus pneumoniae Danish serotypes 33A+33F+37 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85756-5",
"display": "Streptococcus pneumoniae Danish serotypes 18A+18B+18C+18F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85757-3",
"display": "Streptococcus pneumoniae Danish serotypes 15A+15F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85758-1",
"display": "Streptococcus pneumoniae Danish serotypes 12A+12F+44+46 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85759-9",
"display": "Streptococcus pneumoniae Danish serotypes 11A+11D DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "85760-7",
"display": "Streptococcus pneumoniae Danish serotype 19A DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"code": "86503-0",
"display": "Deprecated Streptococcus pneumoniae serotype DNA [Identifier] in Unspecified specimen by NAA with probe detection"
},
{
"code": "92125-4",
"display": "Streptococcus pneumoniae DNA [Presence] in Respiratory specimen by NAA with probe detection"
},
{
"code": "92771-5",
"display": "Streptococcus pneumoniae DNA [Presence] by NAA with probe detection in Positive blood culture"
},
{
"code": "92948-9",
"display": "Streptococcus pneumoniae DNA [NCncRange] in Sputum Qualitative by NAA with non-probe detection"
},
{
"code": "92949-7",
"display": "Streptococcus pneumoniae DNA [NCncRange] in Bronchoalveolar lavage Qualitative by NAA with non-probe detection"
},
{
"code": "94367-0",
"display": "Streptococcus pneumoniae DNA [Presence] in Lower respiratory specimen by NAA with probe detection"
},
{
"code": "96330-6",
"display": "Streptococcus pneumoniae DNA [NCncRange] in Lower respiratory specimen Qualitative by NAA with non-probe detection"
},
{
"code": "97637-3",
"display": "Streptococcus pneumoniae DNA [Presence] in Synovial fluid by NAA with non-probe detection"
}
]
}
]
},
"expansion": {
"identifier": "urn:uuid:f982bf8c-a5e2-484c-8f42-4f879f889387",
"timestamp": "2025-05-23T18:49:29-04:00",
"total": 39,
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"code": "85688-0",
"display": "Streptococcus pneumoniae lytA gene [Cycle Threshold #] in Specimen by NAA with probe detection"
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"system": "http://loinc.org",
"version": "2.80",
"code": "85740-9",
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{
"system": "http://loinc.org",
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"code": "85741-7",
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},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85742-5",
"display": "Streptococcus pneumoniae Danish serotype 3 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85743-3",
"display": "Streptococcus pneumoniae Danish serotype 23F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85744-1",
"display": "Streptococcus pneumoniae Danish serotype 2 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85745-8",
"display": "Streptococcus pneumoniae Danish serotype 19F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85746-6",
"display": "Streptococcus pneumoniae Danish serotype 14 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85747-4",
"display": "Streptococcus pneumoniae Danish serotype 1 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
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"code": "85748-2",
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{
"system": "http://loinc.org",
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"code": "85749-0",
"display": "Streptococcus pneumoniae Danish serotypes 22A+22F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
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"code": "85750-8",
"display": "Streptococcus pneumoniae Danish serotype 23A DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85751-6",
"display": "Streptococcus pneumoniae Danish serotype 16F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85752-4",
"display": "Streptococcus pneumoniae Danish serotypes 9A+9V DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
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"code": "85753-2",
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "85754-0",
"display": "Streptococcus pneumoniae Danish serotypes 6A+6B+6C+6D DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85755-7",
"display": "Streptococcus pneumoniae Danish serotypes 33A+33F+37 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85756-5",
"display": "Streptococcus pneumoniae Danish serotypes 18A+18B+18C+18F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85757-3",
"display": "Streptococcus pneumoniae Danish serotypes 15A+15F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85758-1",
"display": "Streptococcus pneumoniae Danish serotypes 12A+12F+44+46 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85759-9",
"display": "Streptococcus pneumoniae Danish serotypes 11A+11D DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85760-7",
"display": "Streptococcus pneumoniae Danish serotype 19A DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "92125-4",
"display": "Streptococcus pneumoniae DNA [Presence] in Respiratory system specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "92771-5",
"display": "Streptococcus pneumoniae DNA [Presence] by NAA with probe detection in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "92948-9",
"display": "Streptococcus pneumoniae DNA [NCncRange] in Sputum by NAA with non-probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "92949-7",
"display": "Streptococcus pneumoniae DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "94367-0",
"display": "Streptococcus pneumoniae DNA [Presence] in Lower respiratory specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "96330-6",
"display": "Streptococcus pneumoniae DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "97637-3",
"display": "Streptococcus pneumoniae DNA [Presence] in Synovial fluid by NAA with non-probe detection"
}
]
}
}