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Packageus.nlm.vsac
Resource TypeValueSet
IdValueSet-2.16.840.1.113762.1.4.1146.305.json
FHIR VersionR4
Sourcehttps://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.305/expansion
URLhttp://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.305
Version20250219
Statusactive
Date2025-02-19T01:09:45-05:00
NameOrganismsTestsByMicroscopicObservationInSpecimenFromNormallySterileSiteByGramStain
TitleOrganisms (Tests by Microscopic Observation in Specimen from Normally Sterile Site by Gram Stain)
Realmus
Authorityhl7
DescriptionA normally sterile site is defined as:  blood  bone and bone marrow  cerebrospinal fluid (CSF)  internal body sites  specimen obtained from surgery or aspirate from one of the following: brain, heart, kidney, liver, lymph node, ovary, pancreas, spleen, vascular tissue, vitreous fluid:  joint fluid  includes synovial fluid and needle aspirate or culture of any specific joint: ankle, elbow, hip, knee, wrist  muscle  pericardial fluid  peritoneal fluid  includes abdominal fluid, ascites  pleural fluid  includes chest fluid, thoracentesis fluid
Purpose(Clinical Focus: This set of values contains codes for laboratory test names associated with gram stains from a normally sterile site),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: VSAC query: microscopic observation gram stain; LOINC search: 'microscopic observation (fluid or blood or bone or bone marrow or line or CSF or embryo or aspirate or tissue) gram stain -dialysis -genital -semen'),(Exclusion Criteria: Exclude LOINC codes for the following Systems: (Anal, Cervix, Genital, Genital fld, Genital mucus, Pus, Throat, Urethra, Urine, Vag, Bronchial, Ear, Nose, Sputum, Stool, Semen, Wound))

Resources that use this resource

No resources found

Resources that this resource uses

CodeSystem
loinc.orgLOINC codes used in this IG

Narrative

No narrative content found in resource

Source1

{
  "resourceType": "ValueSet",
  "id": "2.16.840.1.113762.1.4.1146.305",
  "meta": {
    "versionId": "33",
    "lastUpdated": "2025-02-19T01:09:45.000-05:00",
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  "extension": [
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        "name": "CSTE Author"
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  "url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.305",
  "identifier": [
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  ],
  "version": "20250219",
  "name": "OrganismsTestsByMicroscopicObservationInSpecimenFromNormallySterileSiteByGramStain",
  "title": "Organisms (Tests by Microscopic Observation in Specimen from Normally Sterile Site by Gram Stain)",
  "status": "active",
  "date": "2025-02-19T01:09:45-05:00",
  "publisher": "CSTE Steward",
  "description": "A normally sterile site is defined as:\n blood\n bone and bone marrow\n cerebrospinal fluid (CSF)\n internal body sites\n specimen obtained from surgery or aspirate from one of the following: brain, heart, kidney, liver, lymph node, ovary, pancreas, spleen, vascular tissue, vitreous fluid:\n joint fluid\n includes synovial fluid and needle aspirate or culture of any specific joint: ankle, elbow, hip, knee, wrist\n muscle\n pericardial fluid\n peritoneal fluid\n includes abdominal fluid, ascites\n pleural fluid\n includes chest fluid, thoracentesis fluid",
  "jurisdiction": [
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          "code": "US"
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      ]
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  ],
  "purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with gram stains from a normally sterile site),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: VSAC query: microscopic observation gram stain;  \n\nLOINC search: 'microscopic observation (fluid or blood or bone or bone marrow or line or CSF or embryo or aspirate or tissue) gram stain -dialysis -genital -semen'),(Exclusion Criteria: Exclude LOINC codes for the following Systems: (Anal, Cervix, Genital, Genital fld, Genital mucus, Pus, Throat, Urethra, Urine, Vag, Bronchial, Ear, Nose, Sputum, Stool, Semen, Wound))",
  "compose": {
    "include": [
      {
        "system": "http://loinc.org",
        "concept": [
          {
            "code": "105915-3",
            "display": "Microscopic observation [Identifier] in Blood by Gram stain --2nd specimen"
          },
          {
            "code": "105929-4",
            "display": "Microscopic observation [Identifier] in Blood by Gram stain --3rd specimen"
          },
          {
            "code": "14357-8",
            "display": "Microscopic observation [Identifier] in Cerebral spinal fluid by Gram stain"
          },
          {
            "code": "14358-6",
            "display": "Microscopic observation [Identifier] in Aspirate by Gram stain"
          },
          {
            "code": "14359-4",
            "display": "Microscopic observation [Identifier] in Peritoneal fluid by Gram stain"
          },
          {
            "code": "14360-2",
            "display": "Microscopic observation [Identifier] in Pleural fluid by Gram stain"
          },
          {
            "code": "14363-6",
            "display": "Microscopic observation [Identifier] in Synovial fluid by Gram stain"
          },
          {
            "code": "21022-9",
            "display": "Microscopic observation [Identifier] in Dialysis fluid by Gram stain"
          },
          {
            "code": "27112-2",
            "display": "Microscopic observation [Identifier] in Body fluid by Gram stain"
          },
          {
            "code": "6664-7",
            "display": "Microscopic observation [Identifier] in Tissue by Gram stain"
          },
          {
            "code": "87967-6",
            "display": "Microscopic observation [Identifier] in Bone marrow by Gram stain"
          },
          {
            "code": "87969-2",
            "display": "Microscopic observation [Identifier] in Blood by Gram stain"
          },
          {
            "code": "87971-8",
            "display": "Microscopic observation [Identifier] in Amniotic fluid by Gram stain"
          },
          {
            "code": "88147-4",
            "display": "Microscopic observation [Identifier] in Pericardial fluid by Gram stain"
          },
          {
            "code": "88158-1",
            "display": "Microscopic observation [Identifier] in Ocular fluid by Gram stain"
          },
          {
            "code": "90262-7",
            "display": "Microscopic observation [Identifier] in Bile fluid by Gram stain"
          }
        ]
      }
    ]
  },
  "expansion": {
    "identifier": "urn:uuid:69c77256-11fd-4c08-8263-62b42ac13338",
    "timestamp": "2025-05-23T18:49:26-04:00",
    "total": 16,
    "contains": [
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "105915-3",
        "display": "Microscopic observation [Identifier] in Blood by Gram stain --2nd specimen"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "105929-4",
        "display": "Microscopic observation [Identifier] in Blood by Gram stain --3rd specimen"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "14357-8",
        "display": "Microscopic observation [Identifier] in Cerebral spinal fluid by Gram stain"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "14358-6",
        "display": "Microscopic observation [Identifier] in Aspirate by Gram stain"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "14359-4",
        "display": "Microscopic observation [Identifier] in Peritoneal fluid by Gram stain"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "14360-2",
        "display": "Microscopic observation [Identifier] in Pleural fluid by Gram stain"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "14363-6",
        "display": "Microscopic observation [Identifier] in Synovial fluid by Gram stain"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "21022-9",
        "display": "Microscopic observation [Identifier] in Dialysis fluid by Gram stain"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "27112-2",
        "display": "Microscopic observation [Identifier] in Body fluid by Gram stain"
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        "version": "2.80",
        "code": "6664-7",
        "display": "Microscopic observation [Identifier] in Tissue by Gram stain"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87967-6",
        "display": "Microscopic observation [Identifier] in Bone marrow by Gram stain"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87969-2",
        "display": "Microscopic observation [Identifier] in Blood by Gram stain"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87971-8",
        "display": "Microscopic observation [Identifier] in Amniotic fluid by Gram stain"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88147-4",
        "display": "Microscopic observation [Identifier] in Pericardial fluid by Gram stain"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88158-1",
        "display": "Microscopic observation [Identifier] in Ocular fluid by Gram stain"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "90262-7",
        "display": "Microscopic observation [Identifier] in Bile fluid by Gram stain"
      }
    ]
  }
}