FHIR IG analytics| Package | us.nlm.vsac |
| Resource Type | ValueSet |
| Id | ValueSet-2.16.840.1.113762.1.4.1146.2380.json |
| FHIR Version | R4 |
| Source | https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.2380/expansion |
| URL | http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.2380 |
| Version | 20240619 |
| Status | active |
| Date | 2024-06-19T01:24:12-04:00 |
| Name | OrganismsTestsInSpecimenFromNonsterileSiteByCultureAndIdentification |
| Title | Organisms (Tests in Specimen from Nonsterile Site by Culture and Identification) |
| Realm | us |
| Authority | hl7 |
| Purpose | (Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of organisms from Nonsterile Site by Culture and Identification),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: bacteria, virus, fungus, culture),(Exclusion Criteria: sterile specimen source) |
No resources found
| CodeSystem | |
| loinc.org | LOINC codes used in this IG |
No narrative content found in resource
FHIR
FHIRsmith{
"resourceType": "ValueSet",
"id": "2.16.840.1.113762.1.4.1146.2380",
"meta": {
"versionId": "6",
"lastUpdated": "2024-06-19T01:24:11.000-04:00",
"profile": [
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"http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
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]
},
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
"valueContactDetail": {
"name": "CSTE Author"
}
},
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
"valueString": "G_Common"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
"valueDate": "2024-06-19"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
"valueDate": "2024-06-19"
}
],
"url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.2380",
"identifier": [
{
"system": "urn:ietf:rfc:3986",
"value": "urn:oid:2.16.840.1.113762.1.4.1146.2380"
}
],
"version": "20240619",
"name": "OrganismsTestsInSpecimenFromNonsterileSiteByCultureAndIdentification",
"title": "Organisms (Tests in Specimen from Nonsterile Site by Culture and Identification)",
"status": "active",
"date": "2024-06-19T01:24:12-04:00",
"publisher": "CSTE Steward",
"jurisdiction": [
{
"coding": [
{
"system": "urn:iso:std:iso:3166",
"code": "US"
}
]
}
],
"purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of organisms from Nonsterile Site by Culture and Identification),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: bacteria, virus, fungus, culture),(Exclusion Criteria: sterile specimen source)",
"compose": {
"include": [
{
"system": "http://loinc.org",
"concept": [
{
"code": "10352-3",
"display": "Bacteria identified in Genital specimen by Aerobe culture"
},
{
"code": "10353-1",
"display": "Bacteria identified in Nose by Aerobe culture"
},
{
"code": "10354-9",
"display": "Bacteria identified in Urethra by Culture"
},
{
"code": "11261-5",
"display": "Bacteria identified in Vaginal fluid by Aerobe culture"
},
{
"code": "12281-2",
"display": "Bacteria identified in Cervix by Anaerobe culture"
},
{
"code": "13315-7",
"display": "Bacteria identified in 24 hour Urine by Culture"
},
{
"code": "14093-9",
"display": "Bacteria identified in Water by Culture"
},
{
"code": "14451-9",
"display": "Virus identified in Eye by Culture"
},
{
"code": "14452-7",
"display": "Virus identified in Cervix by Culture"
},
{
"code": "14453-5",
"display": "Virus identified in Vaginal fluid by Culture"
},
{
"code": "14454-3",
"display": "Virus identified in Nose by Culture"
},
{
"code": "14457-6",
"display": "Virus identified in Urine by Culture"
},
{
"code": "14458-4",
"display": "Virus identified in Sputum by Culture"
},
{
"code": "14459-2",
"display": "Virus identified in Penis by Culture"
},
{
"code": "14460-0",
"display": "Virus identified in Urethra by Culture"
},
{
"code": "14475-8",
"display": "Bacteria identified in Cervix by Aerobe culture"
},
{
"code": "14477-4",
"display": "Bacteria identified in Urethra by Aerobe culture"
},
{
"code": "14478-2",
"display": "Bacteria identified in Penis by Aerobe culture"
},
{
"code": "17878-0",
"display": "Bacteria # 2 identified in Bronchial specimen by Aerobe culture"
},
{
"code": "17879-8",
"display": "Bacteria # 3 identified in Bronchial specimen by Aerobe culture"
},
{
"code": "17880-6",
"display": "Bacteria # 4 identified in Bronchial specimen by Aerobe culture"
},
{
"code": "17881-4",
"display": "Bacteria # 5 identified in Bronchial specimen by Aerobe culture"
},
{
"code": "17882-2",
"display": "Bacteria # 6 identified in Bronchial specimen by Aerobe culture"
},
{
"code": "17883-0",
"display": "Bacteria # 2 identified in Genital specimen by Aerobe culture"
},
{
"code": "17884-8",
"display": "Bacteria # 3 identified in Genital specimen by Aerobe culture"
},
{
"code": "17885-5",
"display": "Bacteria # 4 identified in Genital specimen by Aerobe culture"
},
{
"code": "17886-3",
"display": "Bacteria # 5 identified in Genital specimen by Aerobe culture"
},
{
"code": "17887-1",
"display": "Bacteria # 6 identified in Genital specimen by Aerobe culture"
},
{
"code": "17888-9",
"display": "Bacteria # 2 identified in Nose by Aerobe culture"
},
{
"code": "17889-7",
"display": "Bacteria # 3 identified in Nose by Aerobe culture"
},
{
"code": "17890-5",
"display": "Bacteria # 4 identified in Nose by Aerobe culture"
},
{
"code": "17891-3",
"display": "Bacteria # 5 identified in Nose by Aerobe culture"
},
{
"code": "17892-1",
"display": "Bacteria # 6 identified in Nose by Aerobe culture"
},
{
"code": "17893-9",
"display": "Bacteria # 2 identified in Sputum by Aerobe culture"
},
{
"code": "17894-7",
"display": "Bacteria # 3 identified in Sputum by Aerobe culture"
},
{
"code": "17895-4",
"display": "Bacteria # 4 identified in Sputum by Aerobe culture"
},
{
"code": "17896-2",
"display": "Bacteria # 5 identified in Sputum by Aerobe culture"
},
{
"code": "17897-0",
"display": "Bacteria # 6 identified in Sputum by Aerobe culture"
},
{
"code": "17898-8",
"display": "Bacteria identified in Throat by Aerobe culture"
},
{
"code": "17899-6",
"display": "Bacteria # 2 identified in Throat by Aerobe culture"
},
{
"code": "17900-2",
"display": "Bacteria # 3 identified in Throat by Aerobe culture"
},
{
"code": "17901-0",
"display": "Bacteria # 4 identified in Throat by Aerobe culture"
},
{
"code": "17902-8",
"display": "Bacteria # 5 identified in Throat by Aerobe culture"
},
{
"code": "17903-6",
"display": "Bacteria # 6 identified in Throat by Aerobe culture"
},
{
"code": "17909-3",
"display": "Bacteria identified in Wound deep by Aerobe culture"
},
{
"code": "17910-1",
"display": "Bacteria # 2 identified in Wound deep by Aerobe culture"
},
{
"code": "17911-9",
"display": "Bacteria # 3 identified in Wound deep by Aerobe culture"
},
{
"code": "17912-7",
"display": "Bacteria # 4 identified in Wound deep by Aerobe culture"
},
{
"code": "17914-3",
"display": "Bacteria # 6 identified in Wound deep by Aerobe culture"
},
{
"code": "17915-0",
"display": "Bacteria identified in Wound shallow by Aerobe culture"
},
{
"code": "17916-8",
"display": "Bacteria # 2 identified in Wound shallow by Aerobe culture"
},
{
"code": "17917-6",
"display": "Bacteria # 3 identified in Wound shallow by Aerobe culture"
},
{
"code": "17918-4",
"display": "Bacteria # 4 identified in Wound shallow by Aerobe culture"
},
{
"code": "17919-2",
"display": "Bacteria # 5 identified in Wound shallow by Aerobe culture"
},
{
"code": "17920-0",
"display": "Bacteria # 6 identified in Wound shallow by Aerobe culture"
},
{
"code": "17921-8",
"display": "Bacteria # 2 identified in Nose by Anaerobe culture"
},
{
"code": "17922-6",
"display": "Bacteria # 3 identified in Nose by Anaerobe culture"
},
{
"code": "17925-9",
"display": "Bacteria identified in Wound deep by Anaerobe culture"
},
{
"code": "17926-7",
"display": "Bacteria # 2 identified in Wound deep by Anaerobe culture"
},
{
"code": "17927-5",
"display": "Bacteria # 3 identified in Wound deep by Anaerobe culture"
},
{
"code": "17937-4",
"display": "Bacteria # 2 identified in Burn by Culture"
},
{
"code": "17938-2",
"display": "Bacteria # 3 identified in Burn by Culture"
},
{
"code": "17939-0",
"display": "Bacteria # 4 identified in Burn by Culture"
},
{
"code": "17940-8",
"display": "Bacteria # 5 identified in Burn by Culture"
},
{
"code": "17941-6",
"display": "Bacteria # 6 identified in Burn by Culture"
},
{
"code": "17964-8",
"display": "Bacteria # 2 identified in Stool by Culture"
},
{
"code": "17965-5",
"display": "Bacteria # 3 identified in Stool by Culture"
},
{
"code": "17966-3",
"display": "Bacteria # 4 identified in Stool by Culture"
},
{
"code": "17967-1",
"display": "Bacteria # 5 identified in Stool by Culture"
},
{
"code": "17968-9",
"display": "Bacteria # 6 identified in Stool by Culture"
},
{
"code": "17970-5",
"display": "Bacteria # 2 identified in Urine by Culture"
},
{
"code": "17971-3",
"display": "Bacteria # 3 identified in Urine by Culture"
},
{
"code": "17972-1",
"display": "Bacteria # 4 identified in Urine by Culture"
},
{
"code": "17973-9",
"display": "Bacteria # 5 identified in Urine by Culture"
},
{
"code": "17974-7",
"display": "Bacteria # 6 identified in Urine by Culture"
},
{
"code": "19127-0",
"display": "Bacteria identified in Sputum by Acute Respiratoy Distress (ARDS) culture"
},
{
"code": "24009-3",
"display": "Fungus identified in Bronchial specimen by Culture"
},
{
"code": "27414-2",
"display": "Fungus identified in Stool by Culture"
},
{
"code": "40435-0",
"display": "Fungus identified in Urine by Culture"
},
{
"code": "40480-6",
"display": "Virus identified in Genital specimen by Culture"
},
{
"code": "41026-6",
"display": "Fungus identified in Genital specimen by Culture"
},
{
"code": "43214-6",
"display": "Bacteria identified in Nasopharynx by Culture"
},
{
"code": "43307-8",
"display": "Bacteria identified in Sinus by Culture"
},
{
"code": "43407-6",
"display": "Bacteria identified in Wound deep by Culture"
},
{
"code": "43410-0",
"display": "Bacteria identified in Cervix by Culture"
},
{
"code": "43426-6",
"display": "Bacteria identified in Nasopharynx by Aerobe culture"
},
{
"code": "43441-5",
"display": "Bacteria identified in Bronchoalveolar lavage by Aerobe culture"
},
{
"code": "43442-3",
"display": "Bacteria identified in Bronchial brush by Aerobe culture"
},
{
"code": "44847-2",
"display": "Bacteria # 7 identified in Urine by Culture"
},
{
"code": "44849-8",
"display": "Bacteria # 8 identified in Urine by Culture"
},
{
"code": "47293-6",
"display": "Bacteria # 7 identified in Genital specimen by Aerobe culture"
},
{
"code": "47294-4",
"display": "Bacteria # 7 identified in Wound shallow by Aerobe culture"
},
{
"code": "47295-1",
"display": "Bacteria # 8 identified in Wound shallow by Aerobe culture"
},
{
"code": "52966-9",
"display": "Bacteria identified in Anal by Culture"
},
{
"code": "52967-7",
"display": "Bacteria identified in Gastric fluid by Culture"
},
{
"code": "52973-5",
"display": "Bacteria identified in Sputum tracheal aspirate by Culture"
},
{
"code": "53908-0",
"display": "Bacteria identified in Esophageal brushing by Culture"
},
{
"code": "571-0",
"display": "Fungus identified in Hair by Culture"
},
{
"code": "573-6",
"display": "Fungus identified in Nail by Culture"
},
{
"code": "575-1",
"display": "Fungus identified in Skin by Culture"
},
{
"code": "577-7",
"display": "Fungus identified in Sputum by Culture"
},
{
"code": "579-3",
"display": "Fungus identified in Wound by Culture"
},
{
"code": "5885-9",
"display": "Virus identified in Skin by Culture"
},
{
"code": "5886-7",
"display": "Virus identified in Stool by Culture"
},
{
"code": "5887-5",
"display": "Virus identified in Throat by Culture"
},
{
"code": "595-9",
"display": "Bacteria identified in Abscess by Aerobe culture"
},
{
"code": "60257-3",
"display": "Bacteria identified in Cornea by Culture"
},
{
"code": "603-1",
"display": "Bacteria identified in Burn by Culture"
},
{
"code": "604-9",
"display": "Bacteria identified in Bronchial specimen by Aerobe culture"
},
{
"code": "608-0",
"display": "Bacteria identified in Ear by Aerobe culture"
},
{
"code": "609-8",
"display": "Bacteria identified in Eye by Aerobe culture"
},
{
"code": "620-5",
"display": "Bacteria identified in Skin by Aerobe culture"
},
{
"code": "622-1",
"display": "Bacteria identified in Sputum by Aerobe culture"
},
{
"code": "623-9",
"display": "Bacteria identified in Sputum by Cystic fibrosis respiratory culture"
},
{
"code": "624-7",
"display": "Bacteria identified in Sputum by Respiratory culture"
},
{
"code": "625-4",
"display": "Bacteria identified in Stool by Culture"
},
{
"code": "626-2",
"display": "Bacteria identified in Throat by Culture"
},
{
"code": "630-4",
"display": "Bacteria identified in Urine by Culture"
},
{
"code": "632-0",
"display": "Bacteria identified in Wound by Aerobe culture"
},
{
"code": "633-8",
"display": "Bacteria identified in Wound by Anaerobe culture"
},
{
"code": "6409-7",
"display": "Fungus identified in Sputum tracheal aspirate by Culture"
},
{
"code": "6460-0",
"display": "Bacteria identified in Sputum by Culture"
},
{
"code": "6461-8",
"display": "Bacteria identified in Stool by Anaerobe culture"
},
{
"code": "6462-6",
"display": "Bacteria identified in Wound by Culture"
},
{
"code": "72373-4",
"display": "Virus identified in Nasopharynx by Culture"
},
{
"code": "73960-7",
"display": "Bacteria identified in Mouth by Culture"
},
{
"code": "74816-0",
"display": "Bacteria identified in Eye by Anaerobe+Aerobe culture"
},
{
"code": "75269-1",
"display": "Bacteria identified in Genital specimen by Anaerobe+Aerobe culture"
},
{
"code": "75357-4",
"display": "Bacteria identified in Abscess by Anaerobe+Aerobe culture"
},
{
"code": "76073-6",
"display": "Fungus identified in Nose by Culture"
},
{
"code": "76692-3",
"display": "Fungus identified [#/volume] in Mouth by Culture"
},
{
"code": "77193-1",
"display": "Bacteria identified in Uterus by Culture"
},
{
"code": "79425-5",
"display": "Bacteria identified in Lower respiratory specimen by Cystic fibrosis respiratory culture"
},
{
"code": "87709-2",
"display": "Virus identified in Lower respiratory specimen by Culture"
},
{
"code": "87930-4",
"display": "Bacteria identified in Burn by Aerobe culture"
},
{
"code": "87932-0",
"display": "Bacteria identified in Sinus by Aerobe culture"
},
{
"code": "87936-1",
"display": "Bacteria identified in Burn by Anaerobe culture"
},
{
"code": "87943-7",
"display": "Bacteria identified in Sinus by Anaerobe culture"
},
{
"code": "87980-9",
"display": "Fungus identified in Sinus by Culture"
},
{
"code": "87981-7",
"display": "Fungus identified in Burn by Culture"
},
{
"code": "88142-5",
"display": "Bacteria identified in Cornea or Conjunctiva by Aerobe culture"
},
{
"code": "88143-3",
"display": "Fungus identified in Cornea or Conjunctiva by Culture"
},
{
"code": "88683-8",
"display": "Bacteria identified in Bronchoalveolar lavage by Anaerobe culture"
},
{
"code": "88686-1",
"display": "Fungus identified in Bronchoalveolar lavage by Culture"
},
{
"code": "88687-9",
"display": "Fungus identified in Mouth by Culture"
},
{
"code": "89643-1",
"display": "Bacteria identified in Lower respiratory specimen by Aerobe culture"
},
{
"code": "89644-9",
"display": "Bacteria identified in Lower respiratory specimen by Anaerobe culture"
},
{
"code": "89656-3",
"display": "Fungus identified in Lower respiratory specimen by Culture"
},
{
"code": "90279-1",
"display": "Bacteria identified in Semen by Aerobe culture"
},
{
"code": "91812-8",
"display": "Fungus identified in Upper respiratory specimen by Culture"
},
{
"code": "91818-5",
"display": "Bacteria identified in Upper respiratory specimen by Anaerobe culture"
},
{
"code": "91819-3",
"display": "Bacteria identified in Upper respiratory specimen by Aerobe culture"
},
{
"code": "91865-6",
"display": "Bacteria identified in Genital specimen by Anaerobe culture"
},
{
"code": "91866-4",
"display": "Bacteria identified in Mouth by Aerobe culture"
}
]
}
]
},
"expansion": {
"identifier": "urn:uuid:da11b7e0-1120-4c50-afc2-e00eeaede0ac",
"timestamp": "2025-05-23T18:44:59-04:00",
"total": 154,
"contains": [
{
"system": "http://loinc.org",
"version": "2.80",
"code": "10352-3",
"display": "Bacteria identified in Genital specimen by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "10353-1",
"display": "Bacteria identified in Nose by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "10354-9",
"display": "Bacteria identified in Urethra by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "11261-5",
"display": "Bacteria identified in Vaginal fluid by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "12281-2",
"display": "Bacteria identified in Cervix by Anaerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "13315-7",
"display": "Bacteria identified in 24 hour Urine by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14093-9",
"display": "Bacteria identified in Water by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14451-9",
"display": "Virus identified in Eye by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14452-7",
"display": "Virus identified in Cervix by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14453-5",
"display": "Virus identified in Vaginal fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14454-3",
"display": "Virus identified in Nose by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14457-6",
"display": "Virus identified in Urine by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14458-4",
"display": "Virus identified in Sputum by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14459-2",
"display": "Virus identified in Penis by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14460-0",
"display": "Virus identified in Urethra by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14475-8",
"display": "Bacteria identified in Cervix by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14477-4",
"display": "Bacteria identified in Urethra by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14478-2",
"display": "Bacteria identified in Penis by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17878-0",
"display": "Bacteria # 2 identified in Bronchial specimen by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17879-8",
"display": "Bacteria # 3 identified in Bronchial specimen by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17880-6",
"display": "Bacteria # 4 identified in Bronchial specimen by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17881-4",
"display": "Bacteria # 5 identified in Bronchial specimen by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17882-2",
"display": "Bacteria # 6 identified in Bronchial specimen by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17883-0",
"display": "Bacteria # 2 identified in Genital specimen by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17884-8",
"display": "Bacteria # 3 identified in Genital specimen by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17885-5",
"display": "Bacteria # 4 identified in Genital specimen by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17886-3",
"display": "Bacteria # 5 identified in Genital specimen by Aerobe culture"
},
{
"system": "http://loinc.org",
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