FHIR IG analytics| Package | us.nlm.vsac |
| Resource Type | ValueSet |
| Id | ValueSet-2.16.840.1.113762.1.4.1146.2174.json |
| FHIR Version | R4 |
| Source | https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.2174/expansion |
| URL | http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.2174 |
| Version | 20240620 |
| Status | active |
| Date | 2024-06-20T01:22:57-04:00 |
| Name | FungiCausingEncephalitisTestsForFungiCausingEncephalitisNucleicAcidInUnspecifiedSpecimen |
| Title | Fungi [Causing Encephalitis] (Tests for Fungi Causing Encephalitis Nucleic Acid in Unspecified Specimen) |
| Realm | us |
| Authority | hl7 |
| Purpose | (Clinical Focus: This set of values contains codes for laboratory test names associated with Encephalitis-causing Fungi),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: Encephalitis-causing Fungi),(Exclusion Criteria: none) |
No resources found
| CodeSystem | |
| loinc.org | LOINC codes used in this IG |
No narrative content found in resource
FHIR
FHIRsmith{
"resourceType": "ValueSet",
"id": "2.16.840.1.113762.1.4.1146.2174",
"meta": {
"versionId": "12",
"lastUpdated": "2024-06-20T01:22:57.000-04:00",
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"extension": [
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"valueContactDetail": {
"name": "CSTE Author"
}
},
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
"valueString": "Encephalitis,Trigger"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
"valueDate": "2024-06-20"
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{
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"valueDate": "2024-06-20"
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],
"url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.2174",
"identifier": [
{
"system": "urn:ietf:rfc:3986",
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],
"version": "20240620",
"name": "FungiCausingEncephalitisTestsForFungiCausingEncephalitisNucleicAcidInUnspecifiedSpecimen",
"title": "Fungi [Causing Encephalitis] (Tests for Fungi Causing Encephalitis Nucleic Acid in Unspecified Specimen)",
"status": "active",
"date": "2024-06-20T01:22:57-04:00",
"publisher": "CSTE Steward",
"jurisdiction": [
{
"coding": [
{
"system": "urn:iso:std:iso:3166",
"code": "US"
}
]
}
],
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"compose": {
"include": [
{
"system": "http://loinc.org",
"concept": [
{
"code": "101345-7",
"display": "Candida krusei DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "101781-3",
"display": "Candida guilliermondii DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "101936-3",
"display": "Candida albicans DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "101937-1",
"display": "Candida albicans+glabrata+tropicalis+parapsilosis DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "101938-9",
"display": "Candida dubliniensis DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "101939-7",
"display": "Candida dubliniensis+lusitaniae+krusei+auris DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "101940-5",
"display": "Candida glabrata DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "101942-1",
"display": "Candida lusitaniae DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "101943-9",
"display": "Candida parapsilosis DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "101945-4",
"display": "Candida tropicalis DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "101984-3",
"display": "Candida albicans DNA [Presence] in Body fluid by Probe.amp.tar"
},
{
"code": "101985-0",
"display": "Candida parapsilosis DNA [Presence] in Body fluid by Probe.amp.tar"
},
{
"code": "101986-8",
"display": "Candida krusei DNA [Presence] in Body fluid by Probe.amp.tar"
},
{
"code": "101987-6",
"display": "Candida glabrata DNA [Presence] in Body fluid by Probe.amp.tar"
},
{
"code": "101988-4",
"display": "Candida tropicalis DNA [Presence] in Body fluid by Probe.amp.tar"
},
{
"code": "101989-2",
"display": "Candida dubliniensis DNA [Presence] in Body fluid by Probe.amp.tar"
},
{
"code": "103164-0",
"display": "Cryptococcus neoformans DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "103167-3",
"display": "Blastomyces dermatitidis DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "48588-8",
"display": "Coccidioides sp rRNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "48589-6",
"display": "Coccidioides sp rRNA [Presence] in Isolate by NAA with probe detection"
},
{
"code": "49098-7",
"display": "Cryptococcus neoformans rRNA [Units/volume] in Specimen by NAA with probe detection"
},
{
"code": "4990-8",
"display": "Blastomyces dermatitidis rRNA [Presence] in Specimen by Probe"
},
{
"code": "4994-0",
"display": "Coccidioides immitis rRNA [Presence] in Specimen by Probe"
},
{
"code": "4995-7",
"display": "Cryptococcus neoformans rRNA [Presence] in Specimen by Probe"
},
{
"code": "5015-3",
"display": "Histoplasma capsulatum DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "5016-1",
"display": "Histoplasma capsulatum rRNA [Presence] in Specimen by Probe"
},
{
"code": "51771-4",
"display": "Histoplasma capsulatum DNA [#/volume] in Specimen by NAA with probe detection"
},
{
"code": "70907-1",
"display": "Cryptococcus sp rRNA gene [Identifier] in Specimen by Sequencing"
},
{
"code": "76580-0",
"display": "Candida albicans its gene [Presence] in Swab specimen by NAA with probe detection"
},
{
"code": "76595-8",
"display": "Candida albicans its gene [#/mass] in XXX.tissue by NAA with probe detection"
},
{
"code": "76608-9",
"display": "Candida albicans its gene [#/volume] in XXX.body fluid by NAA with probe detection"
},
{
"code": "81649-6",
"display": "Cryptococcus sp rRNA gene [Presence] in Specimen by NAA with probe detection"
},
{
"code": "81653-8",
"display": "Blastomyces dermatitidis drk1 and Histoplasma capsulatum gapdh genes [Identifier] in Specimen by NAA with probe detection"
},
{
"code": "87620-1",
"display": "Candida auris ITS2 gene [Presence] in Specimen by NAA with probe detection"
},
{
"code": "88926-1",
"display": "Histoplasma capsulatum DNA [Presence] in Tissue by NAA with probe detection"
},
{
"code": "91081-0",
"display": "Candida sp DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "95765-4",
"display": "Candida auris DNA [Presence] in Specimen by NAA with non-probe detection"
},
{
"code": "95913-0",
"display": "Coccidioides sp DNA [Presence] in Tissue by NAA with probe detection"
},
{
"code": "95914-8",
"display": "Blastomyces sp DNA [Presence] in Tissue by NAA with probe detection"
},
{
"code": "97916-1",
"display": "Coccidioides sp DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "97936-9",
"display": "Candida auris DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code": "98393-2",
"display": "Candida sp [Identifier] in Isolate by Sequencing"
},
{
"code": "98410-4",
"display": "Cryptococcus molecular type in Isolate by Sequencing"
}
]
}
]
},
"expansion": {
"identifier": "urn:uuid:e9f16e03-6917-4d72-a8af-383c0a83d49c",
"timestamp": "2025-05-23T18:39:18-04:00",
"total": 43,
"contains": [
{
"system": "http://loinc.org",
"version": "2.80",
"code": "101345-7",
"display": "Candida krusei DNA [Presence] in Specimen by NAA with probe detection"
},
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"version": "2.80",
"code": "101781-3",
"display": "Candida guilliermondii DNA [Presence] in Specimen by NAA with probe detection"
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"code": "101936-3",
"display": "Candida albicans DNA [Presence] in Specimen by NAA with probe detection"
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{
"system": "http://loinc.org",
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"code": "101937-1",
"display": "Candida albicans+glabrata+tropicalis+parapsilosis DNA [Presence] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "101938-9",
"display": "Candida dubliniensis DNA [Presence] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "101939-7",
"display": "Candida dubliniensis+lusitaniae+krusei+auris DNA [Presence] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "101940-5",
"display": "Candida glabrata DNA [Presence] in Specimen by NAA with probe detection"
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "101942-1",
"display": "Candida lusitaniae DNA [Presence] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "101943-9",
"display": "Candida parapsilosis DNA [Presence] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "101945-4",
"display": "Candida tropicalis DNA [Presence] in Specimen by NAA with probe detection"
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "101984-3",
"display": "Candida albicans DNA [Presence] in Body fluid by Probe.amp.tar"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "101985-0",
"display": "Candida parapsilosis DNA [Presence] in Body fluid by Probe.amp.tar"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "101986-8",
"display": "Candida krusei DNA [Presence] in Body fluid by Probe.amp.tar"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "101987-6",
"display": "Candida glabrata DNA [Presence] in Body fluid by Probe.amp.tar"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "101988-4",
"display": "Candida tropicalis DNA [Presence] in Body fluid by Probe.amp.tar"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "101989-2",
"display": "Candida dubliniensis DNA [Presence] in Body fluid by Probe.amp.tar"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "103164-0",
"display": "Cryptococcus neoformans DNA [Presence] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "103167-3",
"display": "Blastomyces dermatitidis DNA [Presence] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "48588-8",
"display": "Coccidioides sp rRNA [Presence] in Specimen by NAA with probe detection"
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "48589-6",
"display": "Coccidioides sp rRNA [Presence] in Isolate by NAA with probe detection"
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "49098-7",
"display": "Cryptococcus neoformans rRNA [Units/volume] in Specimen by NAA with probe detection"
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "4990-8",
"display": "Blastomyces dermatitidis rRNA [Presence] in Specimen by Probe"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "4994-0",
"display": "Coccidioides immitis rRNA [Presence] in Specimen by Probe"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "4995-7",
"display": "Cryptococcus neoformans rRNA [Presence] in Specimen by Probe"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "5015-3",
"display": "Histoplasma capsulatum DNA [Presence] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "5016-1",
"display": "Histoplasma capsulatum rRNA [Presence] in Specimen by Probe"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "51771-4",
"display": "Histoplasma capsulatum DNA [#/volume] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "70907-1",
"display": "Cryptococcus sp rRNA gene [Identifier] in Specimen by Sequencing"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "76580-0",
"display": "Candida albicans its gene [Presence] in Swab specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "76595-8",
"display": "Candida albicans its gene [#/mass] in XXX.tissue by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "76608-9",
"display": "Candida albicans its gene [#/volume] in XXX.body fluid by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "81649-6",
"display": "Cryptococcus sp rRNA gene [Presence] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "81653-8",
"display": "Blastomyces dermatitidis drk1 and Histoplasma capsulatum gapdh genes [Identifier] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87620-1",
"display": "Candida auris ITS2 gene [Presence] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88926-1",
"display": "Histoplasma capsulatum DNA [Presence] in Tissue by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "91081-0",
"display": "Candida sp DNA [Presence] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "95765-4",
"display": "Candida auris DNA [Presence] in Specimen by NAA with non-probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "95913-0",
"display": "Coccidioides sp DNA [Presence] in Tissue by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "95914-8",
"display": "Blastomyces sp DNA [Presence] in Tissue by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "97916-1",
"display": "Coccidioides sp DNA [Presence] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "97936-9",
"display": "Candida auris DNA [Presence] in Specimen by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "98393-2",
"display": "Candida sp identified in Isolate by Sequencing"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "98410-4",
"display": "Cryptococcus molecular type in Isolate by Sequencing"
}
]
}
}