FHIRsmith: ValueSet/ValueSet-2.16.840.1.113762.1.4.1146.1824.json

FHIR IG analytics

Package	us.nlm.vsac
Resource Type	ValueSet
Id	ValueSet-2.16.840.1.113762.1.4.1146.1824.json
FHIR Version	R4
Source	https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.1824/expansion
URL	http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.1824
Version	20240619
Status	active
Date	2024-06-19T01:24:12-04:00
Name	SpirochetesOrganismOrSubstanceInLabResults
Title	Spirochetes (Organism or Substance in Lab Results)
Realm	us
Authority	hl7
Purpose	(Clinical Focus: This set of values contains organism names or substances associated with the presence of Spirochetes regardless of the clinical presentation of the condition),(Data Element Scope: Nominal laboratory result values documented in a clinical record),(Inclusion Criteria: Spirochetes),(Exclusion Criteria: NA)
Resources that use this resource

No resources found
Resources that this resource uses

CodeSystem
sct	SNOMED codes used in this IG
Narrative

No narrative content found in resource
Source1

{
  "resourceType": "ValueSet",
  "id": "2.16.840.1.113762.1.4.1146.1824",
  "meta": {
    "versionId": "13",
    "lastUpdated": "2024-06-19T01:24:11.000-04:00",
    "profile": [
      "http://hl7.org/fhir/StructureDefinition/shareablevalueset",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm"
    ]
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
      "valueContactDetail": {
        "name": "CSTE Author"
      }
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
      "valueString": "G_Common,Spirochetes"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
      "valueDate": "2024-06-19"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
      "valueDate": "2024-06-19"
    }
  ],
  "url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.1824",
  "identifier": [
    {
      "system": "urn:ietf:rfc:3986",
      "value": "urn:oid:2.16.840.1.113762.1.4.1146.1824"
    }
  ],
  "version": "20240619",
  "name": "SpirochetesOrganismOrSubstanceInLabResults",
  "title": "Spirochetes (Organism or Substance in Lab Results)",
  "status": "active",
  "date": "2024-06-19T01:24:12-04:00",
  "publisher": "CSTE Steward",
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "urn:iso:std:iso:3166",
          "code": "US"
        }
      ]
    }
  ],
  "purpose": "(Clinical Focus: This set of values contains organism names or substances associated with the presence of Spirochetes regardless of the clinical presentation of the condition),(Data Element Scope: Nominal laboratory result values documented in a clinical record),(Inclusion Criteria: Spirochetes),(Exclusion Criteria: NA)",
  "compose": {
    "include": [
      {
        "system": "http://snomed.info/sct",
        "concept": [
          {
            "code": "103425002",
            "display": "Borrelia dipodilli (organism)"
          },
          {
            "code": "103426001",
            "display": "Borrelia merionesi (organism)"
          },
          {
            "code": "10752004",
            "display": "Treponema macrodentium (organism)"
          },
          {
            "code": "112277009",
            "display": "Genus Borrelia (organism)"
          },
          {
            "code": "113497007",
            "display": "Borrelia garinii (organism)"
          },
          {
            "code": "113498002",
            "display": "Borrelia japonica (organism)"
          },
          {
            "code": "113499005",
            "display": "Borrelia lusitaniae (organism)"
          },
          {
            "code": "113500001",
            "display": "Borrelia miyamotoi (organism)"
          },
          {
            "code": "113501002",
            "display": "Borrelia tanukii (organism)"
          },
          {
            "code": "113502009",
            "display": "Borrelia turdi (organism)"
          },
          {
            "code": "113503004",
            "display": "Borrelia valaisiana (organism)"
          },
          {
            "code": "113628004",
            "display": "Cristispira pectinis (organism)"
          },
          {
            "code": "113955005",
            "display": "Spirochaeta africana (organism)"
          },
          {
            "code": "113956006",
            "display": "Spirochaeta alkalica (organism)"
          },
          {
            "code": "113957002",
            "display": "Spirochaeta asiatica (organism)"
          },
          {
            "code": "113958007",
            "display": "Spirochaeta caldaria (organism)"
          },
          {
            "code": "113959004",
            "display": "Spirochaeta halophila (organism)"
          },
          {
            "code": "113960009",
            "display": "Spirochaeta thermophila (organism)"
          },
          {
            "code": "114008006",
            "display": "Treponema amylovorum (organism)"
          },
          {
            "code": "114009003",
            "display": "Treponema maltophilum (organism)"
          },
          {
            "code": "114010008",
            "display": "Treponema medium (organism)"
          },
          {
            "code": "115068002",
            "display": "Family Spirochaetaceae (organism)"
          },
          {
            "code": "115160006",
            "display": "Genus Cristispira (organism)"
          },
          {
            "code": "116036004",
            "display": "Borrelia baltazardii (organism)"
          },
          {
            "code": "11787006",
            "display": "Borrelia hispanica (organism)"
          },
          {
            "code": "12100004",
            "display": "Treponema socranskii (organism)"
          },
          {
            "code": "12544007",
            "display": "Borrelia caucasica (organism)"
          },
          {
            "code": "12829000",
            "display": "Treponema pectinovorum (organism)"
          },
          {
            "code": "1296899009",
            "display": "Borrelia bissettiae (organism)"
          },
          {
            "code": "14562002",
            "display": "Treponema carateum (organism)"
          },
          {
            "code": "17005004",
            "display": "Treponema refringens (organism)"
          },
          {
            "code": "17109007",
            "display": "Treponema socranskii ss. socranskii (organism)"
          },
          {
            "code": "20772005",
            "display": "Borrelia graingeri (organism)"
          },
          {
            "code": "22373007",
            "display": "Treponema phagedenis, biotype reiteri (organism)"
          },
          {
            "code": "24986006",
            "display": "Borrelia turicatae (organism)"
          },
          {
            "code": "26807002",
            "display": "Treponema socranskii ss. buccale (organism)"
          },
          {
            "code": "29741004",
            "display": "Treponema scoliodontum (organism)"
          },
          {
            "code": "30345008",
            "display": "Genus Treponema (organism)"
          },
          {
            "code": "30765003",
            "display": "Borrelia venezuelensis (organism)"
          },
          {
            "code": "3196008",
            "display": "Spirochaeta aurantia ss. stricta (organism)"
          },
          {
            "code": "3293005",
            "display": "Borrelia mazzottii (organism)"
          },
          {
            "code": "33171000087107",
            "display": "Treponema pedis (organism)"
          },
          {
            "code": "34726005",
            "display": "Borrelia recurrentis (organism)"
          },
          {
            "code": "35660000",
            "display": "Borrelia crocidurae (organism)"
          },
          {
            "code": "36140004",
            "display": "Borrelia harveyi (organism)"
          },
          {
            "code": "3636009",
            "display": "Treponema minutum (organism)"
          },
          {
            "code": "36722009",
            "display": "Borrelia latyschewii (organism)"
          },
          {
            "code": "37570009",
            "display": "Treponema phagedenis, biotype kazan (organism)"
          },
          {
            "code": "38483009",
            "display": "Treponema denticola, biotype comondonii (organism)"
          },
          {
            "code": "38732005",
            "display": "Genus Spirochaeta (organism)"
          },
          {
            "code": "38999007",
            "display": "Spirochaeta litoralis (organism)"
          },
          {
            "code": "39709002",
            "display": "Borrelia duttonii (organism)"
          },
          {
            "code": "4099006",
            "display": "Treponema denticola (organism)"
          },
          {
            "code": "416551001",
            "display": "Borrelia afzelii (organism)"
          },
          {
            "code": "41704008",
            "display": "Borrelia parkeri (organism)"
          },
          {
            "code": "42036006",
            "display": "Treponema paraluiscuniculi (organism)"
          },
          {
            "code": "431092006",
            "display": "Genus Brevinema (organism)"
          },
          {
            "code": "431153001",
            "display": "Borrelia turcica (organism)"
          },
          {
            "code": "431163009",
            "display": "Borrelia sinica (organism)"
          },
          {
            "code": "432259007",
            "display": "Genus Clevelandina (organism)"
          },
          {
            "code": "432321002",
            "display": "Genus Hollandina (organism)"
          },
          {
            "code": "432682002",
            "display": "Genus Pillotina (organism)"
          },
          {
            "code": "432936007",
            "display": "Genus Diplocalyx (organism)"
          },
          {
            "code": "433555008",
            "display": "Brevinema andersonii (organism)"
          },
          {
            "code": "434130001",
            "display": "Clevelandina reticulitermitidis (organism)"
          },
          {
            "code": "434163008",
            "display": "Pillotina calotermitidis (organism)"
          },
          {
            "code": "434169007",
            "display": "Hollandina pterotermitidis (organism)"
          },
          {
            "code": "434258000",
            "display": "Diplocalyx calotermitidis (organism)"
          },
          {
            "code": "43454006",
            "display": "Treponema pallidum ss. pallidum (organism)"
          },
          {
            "code": "43459001",
            "display": "Borrelia coriaceae (organism)"
          },
          {
            "code": "437880001",
            "display": "Spirochaeta americana (organism)"
          },
          {
            "code": "437881002",
            "display": "Spirochaeta bajacaliforniensis (organism)"
          },
          {
            "code": "439509001",
            "display": "Spirochaeta smaragdinae (organism)"
          },
          {
            "code": "439616008",
            "display": "Treponema parvum (organism)"
          },
          {
            "code": "439617004",
            "display": "Treponema primitia (organism)"
          },
          {
            "code": "439663005",
            "display": "Treponema putidum (organism)"
          },
          {
            "code": "439804000",
            "display": "Treponema brennaborense (organism)"
          },
          {
            "code": "439883009",
            "display": "Treponema azotonutricium (organism)"
          },
          {
            "code": "440317001",
            "display": "Treponema lecithinolyticum (organism)"
          },
          {
            "code": "44106000",
            "display": "Treponema pallidum ss. endemicum (organism)"
          },
          {
            "code": "44305005",
            "display": "Treponema denticola, biotype denticola (organism)"
          },
          {
            "code": "450599009",
            "display": "Borrelia spielmanii (organism)"
          },
          {
            "code": "46373001",
            "display": "Spirochaeta isovalerica (organism)"
          },
          {
            "code": "46401002",
            "display": "Treponema refringens, biotype refringens (organism)"
          },
          {
            "code": "47474000",
            "display": "Treponema vincentii (organism)"
          },
          {
            "code": "49343006",
            "display": "Borrelia brasiliensis (organism)"
          },
          {
            "code": "49476009",
            "display": "Spirochaeta stenostrepta (organism)"
          },
          {
            "code": "56532005",
            "display": "Spirochaeta plicatilis (organism)"
          },
          {
            "code": "56575004",
            "display": "Borrelia microti (organism)"
          },
          {
            "code": "58286007",
            "display": "Borrelia tillae (organism)"
          },
          {
            "code": "58382007",
            "display": "Borrelia anserina (organism)"
          },
          {
            "code": "6246005",
            "display": "Treponema pallidum ss. pertenue (organism)"
          },
          {
            "code": "62748005",
            "display": "Borrelia hermsii (organism)"
          },
          {
            "code": "65346001",
            "display": "Treponema socranskii ss. peredis (organism)"
          },
          {
            "code": "66061004",
            "display": "Spirochaeta aurantia (organism)"
          },
          {
            "code": "68482009",
            "display": "Spirochaeta zuelzerae (organism)"
          },
          {
            "code": "718776004",
            "display": "Borrelia bavariensis (organism)"
          },
          {
            "code": "72904005",
            "display": "Treponema pallidum (organism)"
          },
          {
            "code": "76216005",
            "display": "Spirochaeta aurantia ss. aurantia (organism)"
          },
          {
            "code": "76327009",
            "display": "Borrelia burgdorferi (organism)"
          },
          {
            "code": "781273009",
            "display": "Borrelia mayonii (organism)"
          },
          {
            "code": "783168004",
            "display": "Treponema species not Treponema pallidum (organism)"
          },
          {
            "code": "78733009",
            "display": "Treponema saccharophilum (organism)"
          },
          {
            "code": "8021000087107",
            "display": "Borrelia lonestari (organism)"
          },
          {
            "code": "80392006",
            "display": "Borrelia persica (organism)"
          },
          {
            "code": "82402007",
            "display": "Treponema phagedenis (organism)"
          },
          {
            "code": "85586002",
            "display": "Treponema bryantii (organism)"
          },
          {
            "code": "85872007",
            "display": "Treponema succinifaciens (organism)"
          },
          {
            "code": "86358003",
            "display": "Treponema orale (organism)"
          },
          {
            "code": "87963004",
            "display": "Treponema refringens, biotype calligyrum (organism)"
          },
          {
            "code": "88491004",
            "display": "Borrelia dugesii (organism)"
          },
          {
            "code": "89068003",
            "display": "Borrelia theileri (organism)"
          }
        ]
      }
    ]
  },
  "expansion": {
    "identifier": "urn:uuid:fb612079-2d67-48bb-af60-d4a046dcfff4",
    "timestamp": "2025-05-23T18:31:58-04:00",
    "total": 112,
    "contains": [
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "103425002",
        "display": "Borrelia dipodilli (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "103426001",
        "display": "Borrelia merionesi (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "10752004",
        "display": "Treponema macrodentium (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "112277009",
        "display": "Genus Borrelia (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113497007",
        "display": "Borrelia garinii (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113498002",
        "display": "Borrelia japonica (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113499005",
        "display": "Borrelia lusitaniae (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113500001",
        "display": "Borrelia miyamotoi (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113501002",
        "display": "Borrelia tanukii (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113502009",
        "display": "Borrelia turdi (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113503004",
        "display": "Borrelia valaisiana (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113628004",
        "display": "Cristispira pectinis (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113955005",
        "display": "Spirochaeta africana (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113956006",
        "display": "Spirochaeta alkalica (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113957002",
        "display": "Spirochaeta asiatica (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113958007",
        "display": "Spirochaeta caldaria (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113959004",
        "display": "Spirochaeta halophila (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "113960009",
        "display": "Spirochaeta thermophila (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "114008006",
        "display": "Treponema amylovorum (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "114009003",
        "display": "Treponema maltophilum (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "114010008",
        "display": "Treponema medium (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "115068002",
        "display": "Family Spirochaetaceae (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "115160006",
        "display": "Genus Cristispira (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "116036004",
        "display": "Borrelia baltazardii (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "11787006",
        "display": "Borrelia hispanica (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "12100004",
        "display": "Treponema socranskii (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "12544007",
        "display": "Borrelia caucasica (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "12829000",
        "display": "Treponema pectinovorum (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "1296899009",
        "display": "Borrelia bissettiae (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "14562002",
        "display": "Treponema carateum (organism)"
      },
      {
        "system": "http://snomed.info/sct",
        "version": "http://snomed.info/sct/731000124108/version/20250301",
        "code": "17005004",
        "display": "Treponema refringens (organism)"
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