FHIR IG analytics| Package | us.nlm.vsac |
| Resource Type | ValueSet |
| Id | ValueSet-2.16.840.1.113762.1.4.1146.1567.json |
| FHIR Version | R4 |
| Source | https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.1567/expansion |
| URL | http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.1567 |
| Version | 20240123 |
| Status | active |
| Date | 2024-01-23T01:10:32-05:00 |
| Name | BacteriaCausingMeningitisTestsByCultureAndIdentificationMethod |
| Title | Bacteria [Causing Meningitis] (Tests by Culture and Identification Method) |
| Realm | us |
| Authority | hl7 |
| Purpose | (Clinical Focus: This set of values contains codes for laboratory test names associated with Meningitis-causing bacteria by culture and identification tests),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: Meningitis-causing bacteria by culture and identification tests),(Exclusion Criteria: none) |
No resources found
| CodeSystem | |
| loinc.org | LOINC codes used in this IG |
No narrative content found in resource
FHIR
FHIRsmith{
"resourceType": "ValueSet",
"id": "2.16.840.1.113762.1.4.1146.1567",
"meta": {
"versionId": "16",
"lastUpdated": "2024-01-23T01:10:32.000-05:00",
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},
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
"valueContactDetail": {
"name": "CSTE Author"
}
},
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
"valueString": "Meningitis,Trigger"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
"valueDate": "2025-01-13"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
"valueDate": "2024-01-23"
}
],
"url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.1567",
"identifier": [
{
"system": "urn:ietf:rfc:3986",
"value": "urn:oid:2.16.840.1.113762.1.4.1146.1567"
}
],
"version": "20240123",
"name": "BacteriaCausingMeningitisTestsByCultureAndIdentificationMethod",
"title": "Bacteria [Causing Meningitis] (Tests by Culture and Identification Method)",
"status": "active",
"date": "2024-01-23T01:10:32-05:00",
"publisher": "CSTE Steward",
"jurisdiction": [
{
"coding": [
{
"system": "urn:iso:std:iso:3166",
"code": "US"
}
]
}
],
"purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with Meningitis-causing bacteria by culture and identification tests),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: Meningitis-causing bacteria by culture and identification tests),(Exclusion Criteria: none)",
"compose": {
"include": [
{
"system": "http://loinc.org",
"concept": [
{
"code": "10851-4",
"display": "Escherichia coli O157:H7 [Presence] in Stool by Organism specific culture"
},
{
"code": "13318-1",
"display": "Escherichia coli enteroinvasive identified in Stool by Organism specific culture"
},
{
"code": "16134-9",
"display": "Neisseria meningitidis [Presence] in Specimen by Organism specific culture"
},
{
"code": "16832-8",
"display": "Escherichia coli enterotoxic identified in Stool by Organism specific culture"
},
{
"code": "16835-1",
"display": "Escherichia coli shiga-like toxin identified in Stool by Organism specific culture"
},
{
"code": "16836-9",
"display": "Escherichia coli verotoxic identified in Stool by Organism specific culture"
},
{
"code": "20789-4",
"display": "Escherichia coli serotype [Identifier] in Isolate"
},
{
"code": "38354-7",
"display": "Bartonella sp identified in Specimen by Organism specific culture"
},
{
"code": "42368-1",
"display": "Neisseria meningitidis serogroup w135 Ag [Presence] in Isolate by Agglutination"
},
{
"code": "42369-9",
"display": "Neisseria meningitidis serogroup A Ag [Presence] in Isolate by Agglutination"
},
{
"code": "42370-7",
"display": "Neisseria meningitidis serogroup B Ag [Presence] in Isolate by Agglutination"
},
{
"code": "42371-5",
"display": "Neisseria meningitidis serogroup C Ag [Presence] in Isolate by Agglutination"
},
{
"code": "42372-3",
"display": "Neisseria meningitidis serogroup D Ag [Presence] in Isolate by Agglutination"
},
{
"code": "42373-1",
"display": "Neisseria meningitidis serogroup X Ag [Presence] in Isolate by Agglutination"
},
{
"code": "42374-9",
"display": "Neisseria meningitidis serogroup Y Ag [Presence] in Isolate by Agglutination"
},
{
"code": "42375-6",
"display": "Neisseria meningitidis serogroup Z Ag [Presence] in Isolate by Agglutination"
},
{
"code": "42376-4",
"display": "Neisseria meningitidis serogroup Z' Ag [Presence] in Isolate by Agglutination"
},
{
"code": "44089-1",
"display": "Escherichia coli O157:H7 [Identifier] in Specimen by Organism specific culture"
},
{
"code": "44090-9",
"display": "Escherichia coli O157:H7 [Presence] in Isolate by Organism specific culture"
},
{
"code": "44093-3",
"display": "Neisseria meningitidis [Identifier] in Isolate by Organism specific culture"
},
{
"code": "45162-5",
"display": "Escherichia coli O157 Ag [Presence] in Isolate by Latex agglutination"
},
{
"code": "45183-1",
"display": "Neisseria meningitidis [Identifier] in Isolate by Agglutination"
},
{
"code": "48873-4",
"display": "Ehrlichia sp identified in Specimen by Organism specific culture"
},
{
"code": "49110-0",
"display": "Mycoplasma sp identified in Urine by Organism specific culture"
},
{
"code": "49721-4",
"display": "Haemophilus influenzae type [Identifier] in Isolate"
},
{
"code": "52968-5",
"display": "Streptococcus agalactiae [Presence] in Anal by Organism specific culture"
},
{
"code": "53944-5",
"display": "Escherichia coli enteroinvasive [Presence] in Isolate"
},
{
"code": "53945-2",
"display": "Escherichia coli adherence pattern [Identifier] in Isolate by Hep2 substrate"
},
{
"code": "53955-1",
"display": "Escherichia coli O157 identified in Isolate by Organism specific culture"
},
{
"code": "581-9",
"display": "Streptococcus agalactiae [Presence] in Cervix by Organism specific culture"
},
{
"code": "582-7",
"display": "Streptococcus agalactiae [Presence] in Genital specimen by Organism specific culture"
},
{
"code": "583-5",
"display": "Streptococcus agalactiae [Presence] in Genital lochia by Organism specific culture"
},
{
"code": "584-3",
"display": "Streptococcus agalactiae [Presence] in Vaginal fluid by Organism specific culture"
},
{
"code": "585-0",
"display": "Streptococcus agalactiae [Presence] in Throat by Organism specific culture"
},
{
"code": "586-8",
"display": "Streptococcus agalactiae [Presence] in Specimen by Organism specific culture"
},
{
"code": "58739-4",
"display": "Haemophilus influenzae serotype [Identifier] in Isolate by Agglutination"
},
{
"code": "5878-4",
"display": "Rickettsia sp identified in Blood by Organism specific culture"
},
{
"code": "6486-5",
"display": "Mycoplasma sp identified in Specimen by Organism specific culture"
},
{
"code": "6544-1",
"display": "Rickettsia sp identified in Genital specimen by Organism specific culture"
},
{
"code": "6545-8",
"display": "Rickettsia sp identified in Sputum by Organism specific culture"
},
{
"code": "6546-6",
"display": "Rickettsia sp identified in Specimen by Organism specific culture"
},
{
"code": "69410-9",
"display": "Haemophilus influenzae [Identifier] in Specimen by Organism specific culture"
},
{
"code": "70172-2",
"display": "Neisseria meningitidis serogroup [Identifier] in Specimen"
},
{
"code": "72607-5",
"display": "Streptococcus agalactiae [Presence] in Vag+Rectum by Organism specific culture"
},
{
"code": "73674-4",
"display": "Streptococcus pneumoniae serotype [Type] in Isolate by Agglutination"
},
{
"code": "73685-0",
"display": "Streptococcus pneumoniae Ag [Presence] in Isolate by Latex agglutination"
},
{
"code": "73702-3",
"display": "Neisseria meningitidis serosubtype [Type] in Isolate by Immunoassay"
},
{
"code": "73961-5",
"display": "Escherichia coli and Klebsiella pneumoniae and Pseudomonas aeruginosa rRNA [Identifier] by FISH in Positive blood culture"
},
{
"code": "82303-9",
"display": "Escherichia coli O157 [Presence] in Stool by Culture"
},
{
"code": "85763-1",
"display": "Listeria monocytogenes DNA [Presence] by NAA with non-probe detection in Positive blood culture"
},
{
"code": "85767-2",
"display": "Streptococcus agalactiae DNA [Presence] by NAA with non-probe detection in Positive blood culture"
},
{
"code": "85768-0",
"display": "Streptococcus pneumoniae DNA [Presence] by NAA with non-probe detection in Positive blood culture"
},
{
"code": "85778-9",
"display": "Haemophilus influenzae DNA [Presence] by NAA with non-probe detection in Positive blood culture"
},
{
"code": "85779-7",
"display": "Neisseria meningitidis DNA [Presence] by NAA with non-probe detection in Positive blood culture"
},
{
"code": "86581-6",
"display": "Neisseria meningitidis [Presence] in Cerebral spinal fluid by Organism specific culture"
},
{
"code": "87376-0",
"display": "Escherichia coli Stx1 toxin stx1 gene [Presence] in Isolate by NAA with probe detection"
},
{
"code": "87377-8",
"display": "Escherichia coli Stx2 toxin stx2 gene [Presence] in Isolate by NAA with probe detection"
},
{
"code": "87380-2",
"display": "Escherichia coli Stx2e toxin stx2e gene [Presence] in Isolate by NAA with probe detection"
},
{
"code": "87958-5",
"display": "Neisseria meningitidis [Presence] in Throat by Organism specific culture"
},
{
"code": "88258-9",
"display": "Escherichia coli oppA gene [Presence] by Probe in Positive blood culture"
},
{
"code": "88273-8",
"display": "Streptococcus agalactiae hsp60 gene [Presence] by Probe in Positive blood culture"
},
{
"code": "88275-3",
"display": "Streptococcus pneumoniae gryB gene [Presence] by Probe in Positive blood culture"
},
{
"code": "88722-4",
"display": "Streptococcus pneumoniae serotype [Type] in Isolate"
},
{
"code": "91788-0",
"display": "Neisseria meningitidis [Presence] in Upper respiratory specimen by Organism specific culture"
},
{
"code": "92771-5",
"display": "Streptococcus pneumoniae DNA [Presence] by NAA with probe detection in Positive blood culture"
},
{
"code": "92773-1",
"display": "Streptococcus agalactiae DNA [Presence] by NAA with probe detection in Positive blood culture"
},
{
"code": "92780-6",
"display": "Listeria monocytogenes DNA [Presence] by NAA with probe detection in Positive blood culture"
}
]
}
]
},
"expansion": {
"identifier": "urn:uuid:56cf9c03-d545-4c35-b7e1-706e306d1756",
"timestamp": "2025-05-23T18:29:02-04:00",
"total": 67,
"contains": [
{
"system": "http://loinc.org",
"version": "2.80",
"code": "10851-4",
"display": "Escherichia coli O157:H7 [Presence] in Stool by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "13318-1",
"display": "Escherichia coli enteroinvasive identified in Stool by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "16134-9",
"display": "Neisseria meningitidis [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "16832-8",
"display": "Escherichia coli enterotoxic identified in Stool by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "16835-1",
"display": "Escherichia coli shiga-like toxin identified in Stool by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "16836-9",
"display": "Escherichia coli verotoxic identified in Stool by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "20789-4",
"display": "Escherichia coli serotype [Identifier] in Isolate"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "38354-7",
"display": "Bartonella sp identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "42368-1",
"display": "Neisseria meningitidis serogroup w135 Ag [Presence] in Isolate by Agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "42369-9",
"display": "Neisseria meningitidis serogroup A Ag [Presence] in Isolate by Agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "42370-7",
"display": "Neisseria meningitidis serogroup B Ag [Presence] in Isolate by Agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "42371-5",
"display": "Neisseria meningitidis serogroup C Ag [Presence] in Isolate by Agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "42372-3",
"display": "Neisseria meningitidis serogroup D Ag [Presence] in Isolate by Agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "42373-1",
"display": "Neisseria meningitidis serogroup X Ag [Presence] in Isolate by Agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "42374-9",
"display": "Neisseria meningitidis serogroup Y Ag [Presence] in Isolate by Agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "42375-6",
"display": "Neisseria meningitidis serogroup Z Ag [Presence] in Isolate by Agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "42376-4",
"display": "Neisseria meningitidis serogroup Z' Ag [Presence] in Isolate by Agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "44089-1",
"display": "Escherichia coli O157:H7 [Identifier] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "44090-9",
"display": "Escherichia coli O157:H7 [Presence] in Isolate by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "44093-3",
"display": "Neisseria meningitidis [Identifier] in Isolate by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "45162-5",
"display": "Escherichia coli O157 Ag [Presence] in Isolate by Latex agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "45183-1",
"display": "Neisseria meningitidis [Identifier] in Isolate by Agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "48873-4",
"display": "Ehrlichia sp identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "49110-0",
"display": "Mycoplasma sp identified in Urine by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "49721-4",
"display": "Haemophilus influenzae type [Identifier] in Isolate"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "52968-5",
"display": "Streptococcus agalactiae [Presence] in Anal by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "53944-5",
"display": "Escherichia coli enteroinvasive [Presence] in Isolate"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "53945-2",
"display": "Escherichia coli adherence pattern [Identifier] in Isolate by Hep2 substrate"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "53955-1",
"display": "Escherichia coli O157 identified in Isolate by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "581-9",
"display": "Streptococcus agalactiae [Presence] in Cervix by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "582-7",
"display": "Streptococcus agalactiae [Presence] in Genital specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "583-5",
"display": "Streptococcus agalactiae [Presence] in Genital lochia by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "584-3",
"display": "Streptococcus agalactiae [Presence] in Vaginal fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "585-0",
"display": "Streptococcus agalactiae [Presence] in Throat by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "586-8",
"display": "Streptococcus agalactiae [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "58739-4",
"display": "Haemophilus influenzae serotype [Identifier] in Isolate by Agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "5878-4",
"display": "Rickettsia sp identified in Blood by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "6486-5",
"display": "Mycoplasma sp identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "6544-1",
"display": "Rickettsia sp identified in Genital specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "6545-8",
"display": "Rickettsia sp identified in Sputum by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "6546-6",
"display": "Rickettsia sp identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "69410-9",
"display": "Haemophilus influenzae [Identifier] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "70172-2",
"display": "Neisseria meningitidis serogroup [Identifier] in Specimen"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "72607-5",
"display": "Streptococcus agalactiae [Presence] in Vag+Rectum by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "73674-4",
"display": "Streptococcus pneumoniae serotype [Type] in Isolate by Agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "73685-0",
"display": "Streptococcus pneumoniae Ag [Presence] in Isolate by Latex agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "73702-3",
"display": "Neisseria meningitidis serosubtype [Type] in Isolate by Immunoassay"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "73961-5",
"display": "Escherichia coli and Klebsiella pneumoniae and Pseudomonas aeruginosa rRNA [Identifier] by FISH in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "82303-9",
"display": "Escherichia coli O157 [Presence] in Stool by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85763-1",
"display": "Listeria monocytogenes DNA [Presence] by NAA with non-probe detection in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85767-2",
"display": "Streptococcus agalactiae DNA [Presence] by NAA with non-probe detection in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85768-0",
"display": "Streptococcus pneumoniae DNA [Presence] by NAA with non-probe detection in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85778-9",
"display": "Haemophilus influenzae DNA [Presence] by NAA with non-probe detection in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "85779-7",
"display": "Neisseria meningitidis DNA [Presence] by NAA with non-probe detection in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "86581-6",
"display": "Neisseria meningitidis [Presence] in Cerebral spinal fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87376-0",
"display": "Escherichia coli Stx1 toxin stx1 gene [Presence] in Isolate by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87377-8",
"display": "Escherichia coli Stx2 toxin stx2 gene [Presence] in Isolate by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87380-2",
"display": "Escherichia coli Stx2e toxin stx2e gene [Presence] in Isolate by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87958-5",
"display": "Neisseria meningitidis [Presence] in Throat by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88258-9",
"display": "Escherichia coli oppA gene [Presence] by Probe in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88273-8",
"display": "Streptococcus agalactiae hsp60 gene [Presence] by Probe in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88275-3",
"display": "Streptococcus pneumoniae gryB gene [Presence] by Probe in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88722-4",
"display": "Streptococcus pneumoniae serotype [Type] in Isolate"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "91788-0",
"display": "Neisseria meningitidis [Presence] in Upper respiratory specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "92771-5",
"display": "Streptococcus pneumoniae DNA [Presence] by NAA with probe detection in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "92773-1",
"display": "Streptococcus agalactiae DNA [Presence] by NAA with probe detection in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "92780-6",
"display": "Listeria monocytogenes DNA [Presence] by NAA with probe detection in Positive blood culture"
}
]
}
}