FHIR IG analytics| Package | us.nlm.vsac |
| Resource Type | ValueSet |
| Id | ValueSet-2.16.840.1.113762.1.4.1146.1461.json |
| FHIR Version | R4 |
| Source | https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.1461/expansion |
| URL | http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.1461 |
| Version | 20240619 |
| Status | active |
| Date | 2024-06-19T01:24:12-04:00 |
| Name | OrganismsTestsInSpecimenFromNormallySterileSiteByCultureAndIdentification |
| Title | Organisms (Tests in Specimen from Normally Sterile Site by Culture and Identification) |
| Realm | us |
| Authority | hl7 |
| Purpose | (Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of organisms in specimens from normally sterile sites by culture),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: bacteria, virus, fungus, culture),(Exclusion Criteria: none) |
No resources found
| CodeSystem | |
| loinc.org | LOINC codes used in this IG |
No narrative content found in resource
{
"resourceType": "ValueSet",
"id": "2.16.840.1.113762.1.4.1146.1461",
"meta": {
"versionId": "17",
"lastUpdated": "2024-06-19T01:24:11.000-04:00",
"profile": [
"http://hl7.org/fhir/StructureDefinition/shareablevalueset",
"http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
"http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm"
]
},
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
"valueContactDetail": {
"name": "CSTE Author"
}
},
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
"valueString": "G_Common"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
"valueDate": "2024-06-19"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
"valueDate": "2024-06-19"
}
],
"url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.1461",
"identifier": [
{
"system": "urn:ietf:rfc:3986",
"value": "urn:oid:2.16.840.1.113762.1.4.1146.1461"
}
],
"version": "20240619",
"name": "OrganismsTestsInSpecimenFromNormallySterileSiteByCultureAndIdentification",
"title": "Organisms (Tests in Specimen from Normally Sterile Site by Culture and Identification)",
"status": "active",
"date": "2024-06-19T01:24:12-04:00",
"publisher": "CSTE Steward",
"jurisdiction": [
{
"coding": [
{
"system": "urn:iso:std:iso:3166",
"code": "US"
}
]
}
],
"purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of organisms in specimens from normally sterile sites by culture),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: bacteria, virus, fungus, culture),(Exclusion Criteria: none)",
"compose": {
"include": [
{
"system": "http://loinc.org",
"concept": [
{
"code": "14455-0",
"display": "Virus identified in Pleural fluid by Culture"
},
{
"code": "14456-8",
"display": "Virus identified in Peritoneal fluid by Culture"
},
{
"code": "17279-1",
"display": "Bacteria identified in Pleural fluid by Aerobe culture"
},
{
"code": "17873-1",
"display": "Bacteria # 2 identified in Bone by Aerobe culture"
},
{
"code": "17874-9",
"display": "Bacteria # 3 identified in Bone by Aerobe culture"
},
{
"code": "17875-6",
"display": "Bacteria # 4 identified in Bone by Aerobe culture"
},
{
"code": "17876-4",
"display": "Bacteria # 5 identified in Bone by Aerobe culture"
},
{
"code": "17877-2",
"display": "Bacteria # 6 identified in Bone by Aerobe culture"
},
{
"code": "17913-5",
"display": "Bacteria # 5 identified in Wound deep by Aerobe culture"
},
{
"code": "17928-3",
"display": "Bacteria identified in Blood by Aerobe culture"
},
{
"code": "17929-1",
"display": "Bacteria # 2 identified in Blood by Aerobe culture"
},
{
"code": "17930-9",
"display": "Bacteria # 3 identified in Blood by Aerobe culture"
},
{
"code": "17931-7",
"display": "Bacteria # 4 identified in Blood by Aerobe culture"
},
{
"code": "17932-5",
"display": "Bacteria # 5 identified in Blood by Aerobe culture"
},
{
"code": "17933-3",
"display": "Bacteria # 6 identified in Blood by Aerobe culture"
},
{
"code": "17934-1",
"display": "Bacteria identified in Blood by Anaerobe culture"
},
{
"code": "17935-8",
"display": "Bacteria # 2 identified in Blood by Anaerobe culture"
},
{
"code": "17936-6",
"display": "Bacteria # 3 identified in Blood by Anaerobe culture"
},
{
"code": "17959-8",
"display": "Bacteria # 2 identified in Peritoneal fluid by Culture"
},
{
"code": "17960-6",
"display": "Bacteria # 3 identified in Peritoneal fluid by Culture"
},
{
"code": "17961-4",
"display": "Bacteria # 4 identified in Peritoneal fluid by Culture"
},
{
"code": "17962-2",
"display": "Bacteria # 5 identified in Peritoneal fluid by Culture"
},
{
"code": "17963-0",
"display": "Bacteria # 6 identified in Peritoneal fluid by Culture"
},
{
"code": "19126-2",
"display": "Bacteria identified in Bone marrow by Aerobe culture"
},
{
"code": "20694-6",
"display": "Bacteria identified in Embryo by Aerobe culture"
},
{
"code": "43411-8",
"display": "Bacteria identified in Aspirate by Culture"
},
{
"code": "45275-5",
"display": "Bacteria identified in Blood by Aerobe culture 25 degree C incubation"
},
{
"code": "45276-3",
"display": "Bacteria identified in Blood by Anaerobe culture 25 degree C incubation"
},
{
"code": "48724-9",
"display": "Bacteria # 3 identified in Blood by Culture"
},
{
"code": "48727-2",
"display": "Bacteria # 2 identified in Blood by Culture"
},
{
"code": "53614-4",
"display": "Bacteria # 2 identified in Duodenal fluid by Aerobe culture"
},
{
"code": "53615-1",
"display": "Bacteria # 3 identified in Duodenal fluid by Aerobe culture"
},
{
"code": "53616-9",
"display": "Bacteria # 4 identified in Duodenal fluid by Aerobe culture"
},
{
"code": "53617-7",
"display": "Bacteria identified in Duodenal fluid by Aerobe culture"
},
{
"code": "53911-4",
"display": "Bacteria identified in Bile fluid by Culture"
},
{
"code": "56715-6",
"display": "Bacteria identified in Pericardial fluid by Culture"
},
{
"code": "569-4",
"display": "Fungus identified in Cerebral spinal fluid by Culture"
},
{
"code": "572-8",
"display": "Fungus identified in Bone marrow by Culture"
},
{
"code": "574-4",
"display": "Fungus identified in Peritoneal fluid by Culture"
},
{
"code": "576-9",
"display": "Fungus identified in Synovial fluid by Culture"
},
{
"code": "5883-4",
"display": "Virus identified in Blood by Culture"
},
{
"code": "5884-2",
"display": "Virus identified in Cerebral spinal fluid by Culture"
},
{
"code": "596-7",
"display": "Bacteria identified in Amniotic fluid by Culture"
},
{
"code": "597-5",
"display": "Bacteria identified in Aspirate by Aerobe culture"
},
{
"code": "598-3",
"display": "Bacteria identified in Aspirate by Anaerobe culture"
},
{
"code": "600-7",
"display": "Bacteria identified in Blood by Culture"
},
{
"code": "601-5",
"display": "Fungus identified in Blood by Culture"
},
{
"code": "602-3",
"display": "Bacteria identified in Bone by Aerobe culture"
},
{
"code": "60258-1",
"display": "Bacteria identified in Bone marrow by Culture"
},
{
"code": "606-4",
"display": "Bacteria identified in Cerebral spinal fluid by Culture"
},
{
"code": "617-1",
"display": "Bacteria identified in Placenta by Aerobe culture"
},
{
"code": "618-9",
"display": "Bacteria identified in Pleural fluid by Culture"
},
{
"code": "619-7",
"display": "Bacteria identified in Peritoneal fluid by Culture"
},
{
"code": "621-3",
"display": "Bacteria identified in Synovial fluid by Culture"
},
{
"code": "636-1",
"display": "Bacteria identified in Specimen by Sterile body fluid culture"
},
{
"code": "74356-7",
"display": "Bacteria identified in Ventriculoperitoneal (VP) shunt by Culture"
},
{
"code": "75358-2",
"display": "Bacteria identified in Bone by Anaerobe+Aerobe culture"
},
{
"code": "75359-0",
"display": "Bacteria identified in Bone marrow by Anaerobe+Aerobe culture"
},
{
"code": "75518-1",
"display": "Bacteria identified in Cerebral spinal fluid by Latex agglutination"
},
{
"code": "87929-6",
"display": "Bacteria identified in Amniotic fluid by Aerobe culture"
},
{
"code": "87933-8",
"display": "Bacteria identified in Amniotic fluid by Anaerobe culture"
},
{
"code": "87934-6",
"display": "Bacteria identified in Bile fluid by Anaerobe culture"
},
{
"code": "87937-9",
"display": "Bacteria identified in Cerebral spinal fluid by Anaerobe culture"
},
{
"code": "87940-3",
"display": "Bacteria identified in Peritoneal fluid by Anaerobe culture"
},
{
"code": "87942-9",
"display": "Bacteria identified in Pleural fluid by Anaerobe culture"
},
{
"code": "87944-5",
"display": "Bacteria identified in Synovial fluid by Anaerobe culture"
},
{
"code": "87954-4",
"display": "Bacteria identified in Cord blood by Aerobe culture"
},
{
"code": "87955-1",
"display": "Bacteria identified in Cord blood by Anaerobe culture"
},
{
"code": "87977-5",
"display": "Fungus identified in Pericardial fluid by Culture"
},
{
"code": "87979-1",
"display": "Fungus identified in Pleural fluid by Culture"
},
{
"code": "88139-1",
"display": "Bacteria identified in Ocular fluid by Anaerobe culture"
},
{
"code": "88141-7",
"display": "Bacteria identified in Ocular fluid by Aerobe culture"
},
{
"code": "88236-5",
"display": "Bacteria identified in Cerebral spinal fluid by Aerobe culture"
},
{
"code": "90270-0",
"display": "Bacteria identified in Bile fluid by Aerobe culture"
},
{
"code": "90278-3",
"display": "Bacteria identified in Synovial fluid by Aerobe culture"
},
{
"code": "90281-7",
"display": "Bacteria identified in Peritoneal fluid by Aerobe culture"
}
]
}
]
},
"expansion": {
"identifier": "urn:uuid:1cd6777d-80f2-4603-9ad0-769e3a72debf",
"timestamp": "2025-05-23T18:27:29-04:00",
"total": 76,
"contains": [
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14455-0",
"display": "Virus identified in Pleural fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14456-8",
"display": "Virus identified in Peritoneal fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17279-1",
"display": "Bacteria identified in Pleural fluid by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17873-1",
"display": "Bacteria # 2 identified in Bone by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17874-9",
"display": "Bacteria # 3 identified in Bone by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17875-6",
"display": "Bacteria # 4 identified in Bone by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17876-4",
"display": "Bacteria # 5 identified in Bone by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17877-2",
"display": "Bacteria # 6 identified in Bone by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17913-5",
"display": "Bacteria # 5 identified in Wound deep by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17928-3",
"display": "Bacteria identified in Blood by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17929-1",
"display": "Bacteria # 2 identified in Blood by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17930-9",
"display": "Bacteria # 3 identified in Blood by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17931-7",
"display": "Bacteria # 4 identified in Blood by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17932-5",
"display": "Bacteria # 5 identified in Blood by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17933-3",
"display": "Bacteria # 6 identified in Blood by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17934-1",
"display": "Bacteria identified in Blood by Anaerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17935-8",
"display": "Bacteria # 2 identified in Blood by Anaerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17936-6",
"display": "Bacteria # 3 identified in Blood by Anaerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17959-8",
"display": "Bacteria # 2 identified in Peritoneal fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17960-6",
"display": "Bacteria # 3 identified in Peritoneal fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17961-4",
"display": "Bacteria # 4 identified in Peritoneal fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17962-2",
"display": "Bacteria # 5 identified in Peritoneal fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "17963-0",
"display": "Bacteria # 6 identified in Peritoneal fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "19126-2",
"display": "Bacteria identified in Bone marrow by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "20694-6",
"display": "Bacteria identified in Embryo by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "43411-8",
"display": "Bacteria identified in Aspirate by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "45275-5",
"display": "Bacteria identified in Blood by Aerobe culture 25 degree C incubation"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "45276-3",
"display": "Bacteria identified in Blood by Anaerobe culture 25 degree C incubation"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "48724-9",
"display": "Bacteria # 3 identified in Blood by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "48727-2",
"display": "Bacteria # 2 identified in Blood by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "53614-4",
"display": "Bacteria # 2 identified in Duodenal fluid by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "53615-1",
"display": "Bacteria # 3 identified in Duodenal fluid by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "53616-9",
"display": "Bacteria # 4 identified in Duodenal fluid by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "53617-7",
"display": "Bacteria identified in Duodenal fluid by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "53911-4",
"display": "Bacteria identified in Bile fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "56715-6",
"display": "Bacteria identified in Pericardial fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "569-4",
"display": "Fungus identified in Cerebral spinal fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "572-8",
"display": "Fungus identified in Bone marrow by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "574-4",
"display": "Fungus identified in Peritoneal fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "576-9",
"display": "Fungus identified in Synovial fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "5883-4",
"display": "Virus identified in Blood by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "5884-2",
"display": "Virus identified in Cerebral spinal fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "596-7",
"display": "Bacteria identified in Amniotic fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "597-5",
"display": "Bacteria identified in Aspirate by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "598-3",
"display": "Bacteria identified in Aspirate by Anaerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "600-7",
"display": "Bacteria identified in Blood by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "601-5",
"display": "Fungus identified in Blood by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "602-3",
"display": "Bacteria identified in Bone by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "60258-1",
"display": "Bacteria identified in Bone marrow by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "606-4",
"display": "Bacteria identified in Cerebral spinal fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "617-1",
"display": "Bacteria identified in Placenta by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "618-9",
"display": "Bacteria identified in Pleural fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "619-7",
"display": "Bacteria identified in Peritoneal fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "621-3",
"display": "Bacteria identified in Synovial fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "636-1",
"display": "Bacteria identified in Specimen by Sterile body fluid culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "74356-7",
"display": "Bacteria identified in Ventriculoperitoneal (VP) shunt by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "75358-2",
"display": "Bacteria identified in Bone by Anaerobe+Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "75359-0",
"display": "Bacteria identified in Bone marrow by Anaerobe+Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "75518-1",
"display": "Bacteria identified in Cerebral spinal fluid by Latex agglutination"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87929-6",
"display": "Bacteria identified in Amniotic fluid by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87933-8",
"display": "Bacteria identified in Amniotic fluid by Anaerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87934-6",
"display": "Bacteria identified in Bile fluid by Anaerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87937-9",
"display": "Bacteria identified in Cerebral spinal fluid by Anaerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87940-3",
"display": "Bacteria identified in Peritoneal fluid by Anaerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87942-9",
"display": "Bacteria identified in Pleural fluid by Anaerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87944-5",
"display": "Bacteria identified in Synovial fluid by Anaerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87954-4",
"display": "Bacteria identified in Cord blood by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87955-1",
"display": "Bacteria identified in Cord blood by Anaerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87977-5",
"display": "Fungus identified in Pericardial fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "87979-1",
"display": "Fungus identified in Pleural fluid by Culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88139-1",
"display": "Bacteria identified in Ocular fluid by Anaerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88141-7",
"display": "Bacteria identified in Ocular fluid by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88236-5",
"display": "Bacteria identified in Cerebral spinal fluid by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "90270-0",
"display": "Bacteria identified in Bile fluid by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "90278-3",
"display": "Bacteria identified in Synovial fluid by Aerobe culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "90281-7",
"display": "Bacteria identified in Peritoneal fluid by Aerobe culture"
}
]
}
}