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Packageus.nlm.vsac
Resource TypeValueSet
IdValueSet-2.16.840.1.113762.1.4.1146.1219.json
FHIR VersionR4
Sourcehttps://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.1219/expansion
URLhttp://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.1219
Version20250219
Statusactive
Date2025-02-19T01:09:45-05:00
NameTestsForEnterobacterSppEColiOrKlebsiellaSppByCultureAndIdentificationMethod
TitleTests for Enterobacter spp., E. coli, or Klebsiella spp. by Culture and Identification Method
Realmus
Authorityhl7
Purpose(Clinical Focus: This set of values contains codes for laboratory test names associated with testsĀ for Enterobacter spp., E. coli, or Klebsiella spp. by culture),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: Enterobacter spp., E. coli, or Klebsiella spp.),(Exclusion Criteria: non-culture methods)

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Resources that this resource uses

CodeSystem
loinc.orgLOINC codes used in this IG

Narrative

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Source1

{
  "resourceType": "ValueSet",
  "id": "2.16.840.1.113762.1.4.1146.1219",
  "meta": {
    "versionId": "17",
    "lastUpdated": "2025-02-19T01:09:45.000-05:00",
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  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
      "valueContactDetail": {
        "name": "CSTE Author"
      }
    },
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      "valueString": "CP_CRE,CRE,Trigger"
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  ],
  "version": "20250219",
  "name": "TestsForEnterobacterSppEColiOrKlebsiellaSppByCultureAndIdentificationMethod",
  "title": "Tests for Enterobacter spp., E. coli, or Klebsiella spp. by Culture and Identification Method",
  "status": "active",
  "date": "2025-02-19T01:09:45-05:00",
  "publisher": "CSTE Steward",
  "jurisdiction": [
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      "coding": [
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        }
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  "purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with testsĀ for Enterobacter spp., E. coli, or Klebsiella spp. by culture),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: Enterobacter spp., E. coli, or Klebsiella spp.),(Exclusion Criteria: non-culture methods)",
  "compose": {
    "include": [
      {
        "system": "http://loinc.org",
        "concept": [
          {
            "code": "105764-5",
            "display": "Enterobacter spp DNA [Cycle Threshold #] in Positive blood culture by NAA with probe detection"
          },
          {
            "code": "105766-0",
            "display": "Klebsiella spp DNA [Cycle Threshold #] in Positive blood culture by NAA with probe detection"
          },
          {
            "code": "10851-4",
            "display": "Escherichia coli O157:H7 [Presence] in Stool by Organism specific culture"
          },
          {
            "code": "13318-1",
            "display": "Escherichia coli enteroinvasive identified in Stool by Organism specific culture"
          },
          {
            "code": "16832-8",
            "display": "Escherichia coli enterotoxic identified in Stool by Organism specific culture"
          },
          {
            "code": "16835-1",
            "display": "Escherichia coli shiga-like toxin identified in Stool by Organism specific culture"
          },
          {
            "code": "16836-9",
            "display": "Escherichia coli verotoxic identified in Stool by Organism specific culture"
          },
          {
            "code": "20789-4",
            "display": "Escherichia coli serotype [Identifier] in Isolate"
          },
          {
            "code": "20811-6",
            "display": "Escherichia coli [Presence] in Specimen by Culture FDA method"
          },
          {
            "code": "20813-2",
            "display": "Escherichia coli F41 [Presence] in Isolate by Agglutination"
          },
          {
            "code": "20816-5",
            "display": "Escherichia coli K88 [Presence] in Isolate by Agglutination"
          },
          {
            "code": "20819-9",
            "display": "Escherichia coli K99 [Presence] in Isolate by Agglutination"
          },
          {
            "code": "44089-1",
            "display": "Escherichia coli O157:H7 [Identifier] in Specimen by Organism specific culture"
          },
          {
            "code": "44090-9",
            "display": "Escherichia coli O157:H7 [Presence] in Isolate by Organism specific culture"
          },
          {
            "code": "45162-5",
            "display": "Escherichia coli O157 Ag [Presence] in Isolate by Latex agglutination"
          },
          {
            "code": "48806-4",
            "display": "Salmonella sp+Shigella sp+Escherichia coli enterotoxic identified in Stool by Organism specific culture"
          },
          {
            "code": "53944-5",
            "display": "Escherichia coli enteroinvasive [Presence] in Isolate"
          },
          {
            "code": "53945-2",
            "display": "Escherichia coli adherence pattern [Identifier] in Isolate by Hep2 substrate"
          },
          {
            "code": "53955-1",
            "display": "Escherichia coli O157 identified in Isolate by Organism specific culture"
          },
          {
            "code": "6595-3",
            "display": "Klebsiella granulomatis [Presence] in Isolate by Organism specific culture"
          },
          {
            "code": "73961-5",
            "display": "Escherichia coli and Klebsiella pneumoniae and Pseudomonas aeruginosa rRNA [Identifier] by FISH in Positive blood culture"
          },
          {
            "code": "82303-9",
            "display": "Escherichia coli O157 [Presence] in Stool by Culture"
          },
          {
            "code": "85761-5",
            "display": "Klebsiella pneumoniae DNA [Presence] by NAA with non-probe detection in Positive blood culture"
          },
          {
            "code": "85772-2",
            "display": "Enterobacter cloacae complex DNA [Presence] by NAA with non-probe detection in Positive blood culture"
          },
          {
            "code": "85773-0",
            "display": "Escherichia coli DNA [Presence] by NAA with non-probe detection in Positive blood culture"
          },
          {
            "code": "85774-8",
            "display": "Klebsiella oxytoca DNA [Presence] by NAA with non-probe detection in Positive blood culture"
          },
          {
            "code": "87318-2",
            "display": "Escherichia coli eaeA gene [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87319-0",
            "display": "Escherichia coli enteroaggregative astA gene [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87320-8",
            "display": "Escherichia coli enterotoxigenic heat-labile toxin DNA [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87321-6",
            "display": "Escherichia coli enterotoxigenic sta gene [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87322-4",
            "display": "Escherichia coli enterotoxigenic stb gene [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87370-3",
            "display": "Escherichia coli fasA gene [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87371-1",
            "display": "Escherichia coli fedF gene [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87372-9",
            "display": "Escherichia coli FimF41a gene [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87373-7",
            "display": "Escherichia coli K88 DNA [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87374-5",
            "display": "Escherichia coli K99 DNA [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87375-2",
            "display": "Escherichia coli paa gene [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87376-0",
            "display": "Escherichia coli Stx1 toxin stx1 gene [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87377-8",
            "display": "Escherichia coli Stx2 toxin stx2 gene [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87380-2",
            "display": "Escherichia coli Stx2e toxin stx2e gene [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "87402-4",
            "display": "Escherichia coli aidA-I gene [Presence] in Isolate by NAA with probe detection"
          },
          {
            "code": "88255-5",
            "display": "Enterobacter sp gyrB+metB genes [Presence] by Probe in Positive blood culture"
          },
          {
            "code": "88258-9",
            "display": "Escherichia coli oppA gene [Presence] by Probe in Positive blood culture"
          },
          {
            "code": "88263-9",
            "display": "Klebsiella oxytoca ompA gene [Presence] by Probe in Positive blood culture"
          },
          {
            "code": "88264-7",
            "display": "Klebsiella pneumoniae yggE gene [Presence] by Probe in Positive blood culture"
          },
          {
            "code": "93395-2",
            "display": "Klebsiella pneumoniae DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "93398-6",
            "display": "Klebsiella oxytoca DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "93400-0",
            "display": "Enterobacter aerogenes+Enterobacter amnigenus+Enterobacter gergoviae DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "93401-8",
            "display": "Escherichia coli DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "93404-2",
            "display": "Enterobacter cloacae complex DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "96307-4",
            "display": "Klebsiella pneumoniae+Klebsiella variicola+Klebsiella quasipneumoniae DNA [Presence] by NAA with non-probe detection in Positive blood culture"
          },
          {
            "code": "96308-2",
            "display": "Klebsiella aerogenes DNA [Presence] by NAA with non-probe detection in Positive blood culture"
          }
        ]
      }
    ]
  },
  "expansion": {
    "identifier": "urn:uuid:d8856310-a276-4530-b1ac-494c22d39adf",
    "timestamp": "2025-05-23T18:24:38-04:00",
    "total": 52,
    "contains": [
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        "system": "http://loinc.org",
        "version": "2.80",
        "code": "105764-5",
        "display": "Enterobacter spp DNA [Cycle Threshold #] in Positive blood culture by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "105766-0",
        "display": "Klebsiella spp DNA [Cycle Threshold #] in Positive blood culture by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "10851-4",
        "display": "Escherichia coli O157:H7 [Presence] in Stool by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "13318-1",
        "display": "Escherichia coli enteroinvasive identified in Stool by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "16832-8",
        "display": "Escherichia coli enterotoxic identified in Stool by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "16835-1",
        "display": "Escherichia coli shiga-like toxin identified in Stool by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "16836-9",
        "display": "Escherichia coli verotoxic identified in Stool by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "20789-4",
        "display": "Escherichia coli serotype [Identifier] in Isolate"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "20811-6",
        "display": "Escherichia coli [Presence] in Specimen by Culture FDA method"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "20813-2",
        "display": "Escherichia coli F41 [Presence] in Isolate by Agglutination"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "20816-5",
        "display": "Escherichia coli K88 [Presence] in Isolate by Agglutination"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "20819-9",
        "display": "Escherichia coli K99 [Presence] in Isolate by Agglutination"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "44089-1",
        "display": "Escherichia coli O157:H7 [Identifier] in Specimen by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "44090-9",
        "display": "Escherichia coli O157:H7 [Presence] in Isolate by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "45162-5",
        "display": "Escherichia coli O157 Ag [Presence] in Isolate by Latex agglutination"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "48806-4",
        "display": "Salmonella sp+Shigella sp+Escherichia coli enterotoxic identified in Stool by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "53944-5",
        "display": "Escherichia coli enteroinvasive [Presence] in Isolate"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "53945-2",
        "display": "Escherichia coli adherence pattern [Identifier] in Isolate by Hep2 substrate"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "53955-1",
        "display": "Escherichia coli O157 identified in Isolate by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "6595-3",
        "display": "Klebsiella granulomatis [Presence] in Isolate by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "73961-5",
        "display": "Escherichia coli and Klebsiella pneumoniae and Pseudomonas aeruginosa rRNA [Identifier] by FISH in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "82303-9",
        "display": "Escherichia coli O157 [Presence] in Stool by Culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "85761-5",
        "display": "Klebsiella pneumoniae DNA [Presence] by NAA with non-probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "85772-2",
        "display": "Enterobacter cloacae complex DNA [Presence] by NAA with non-probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "85773-0",
        "display": "Escherichia coli DNA [Presence] by NAA with non-probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "85774-8",
        "display": "Klebsiella oxytoca DNA [Presence] by NAA with non-probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87318-2",
        "display": "Escherichia coli eaeA gene [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87319-0",
        "display": "Escherichia coli enteroaggregative astA gene [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87320-8",
        "display": "Escherichia coli enterotoxigenic heat-labile toxin DNA [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87321-6",
        "display": "Escherichia coli enterotoxigenic sta gene [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87322-4",
        "display": "Escherichia coli enterotoxigenic stb gene [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87370-3",
        "display": "Escherichia coli fasA gene [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87371-1",
        "display": "Escherichia coli fedF gene [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87372-9",
        "display": "Escherichia coli FimF41a gene [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87373-7",
        "display": "Escherichia coli K88 DNA [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87374-5",
        "display": "Escherichia coli K99 DNA [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87375-2",
        "display": "Escherichia coli paa gene [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87376-0",
        "display": "Escherichia coli Stx1 toxin stx1 gene [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87377-8",
        "display": "Escherichia coli Stx2 toxin stx2 gene [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87380-2",
        "display": "Escherichia coli Stx2e toxin stx2e gene [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "87402-4",
        "display": "Escherichia coli aidA-I gene [Presence] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88255-5",
        "display": "Enterobacter sp gyrB+metB genes [Presence] by Probe in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88258-9",
        "display": "Escherichia coli oppA gene [Presence] by Probe in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88263-9",
        "display": "Klebsiella oxytoca ompA gene [Presence] by Probe in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88264-7",
        "display": "Klebsiella pneumoniae yggE gene [Presence] by Probe in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "93395-2",
        "display": "Klebsiella pneumoniae DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "93398-6",
        "display": "Klebsiella oxytoca DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "93400-0",
        "display": "Enterobacter aerogenes+Enterobacter amnigenus+Enterobacter gergoviae DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "93401-8",
        "display": "Escherichia coli DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "93404-2",
        "display": "Enterobacter cloacae complex DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "96307-4",
        "display": "Klebsiella pneumoniae+Klebsiella variicola+Klebsiella quasipneumoniae DNA [Presence] by NAA with non-probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "96308-2",
        "display": "Klebsiella aerogenes DNA [Presence] by NAA with non-probe detection in Positive blood culture"
      }
    ]
  }
}