FHIR IG analytics| Package | us.nlm.vsac |
| Resource Type | ValueSet |
| Id | ValueSet-2.16.840.1.113762.1.4.1146.1002.json |
| FHIR Version | R4 |
| Source | https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.1002/expansion |
| URL | http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.1002 |
| Version | 20230602 |
| Status | active |
| Date | 2023-06-02T01:03:51-04:00 |
| Name | TuberculosisTestsForMycobacteriumSpeciesByCultureAndIdentificationMethod |
| Title | Tuberculosis (Tests for Mycobacterium species by Culture and Identification Method) |
| Realm | us |
| Authority | hl7 |
| Purpose | (Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of Mycobacterium species in culture),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: component: Mycobacterium sp isolate / culture; Mycobacterium tuberculosis complex isolate / culture; LOINC search: "Mycobacterium (avium or bovis or sp or abscessus or avium complex or kansaii or leprae) (culture or isolate) -panel -interpretation"),(Exclusion Criteria: none) |
No resources found
| CodeSystem | |
| loinc.org | LOINC codes used in this IG |
No narrative content found in resource
FHIR
FHIRsmith{
"resourceType": "ValueSet",
"id": "2.16.840.1.113762.1.4.1146.1002",
"meta": {
"versionId": "32",
"lastUpdated": "2025-05-14T14:45:09.000-04:00",
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},
"extension": [
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"valueContactDetail": {
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"valueString": "G_Respiratory,Trigger,Tuberculosis"
},
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],
"url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.1002",
"identifier": [
{
"system": "urn:ietf:rfc:3986",
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],
"version": "20230602",
"name": "TuberculosisTestsForMycobacteriumSpeciesByCultureAndIdentificationMethod",
"title": "Tuberculosis (Tests for Mycobacterium species by Culture and Identification Method)",
"status": "active",
"date": "2023-06-02T01:03:51-04:00",
"publisher": "CSTE Steward",
"jurisdiction": [
{
"coding": [
{
"system": "urn:iso:std:iso:3166",
"code": "US"
}
]
}
],
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"compose": {
"include": [
{
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"concept": [
{
"code": "20892-6",
"display": "Mycobacterium avium ss paratuberculosis [Presence] in Tissue by Organism specific culture"
},
{
"code": "20893-4",
"display": "Mycobacterium avium ss paratuberculosis [Presence] in Stool by Organism specific culture"
},
{
"code": "24427-7",
"display": "Mycobacterium avium ss paratuberculosis [Presence] in Specimen by Organism specific culture"
},
{
"code": "30045-9",
"display": "Mycobacterium sp identified in Dialysis fluid by Organism specific culture"
},
{
"code": "35352-4",
"display": "Mycobacterium tuberculosis genotype [Identifier] in Isolate"
},
{
"code": "42716-1",
"display": "Mycobacterium sp rRNA [Identifier] in Isolate by NAA with probe detection"
},
{
"code": "42717-9",
"display": "Mycobacterium tuberculosis complex genotype [Identifier] in Isolate"
},
{
"code": "44851-4",
"display": "Mycobacterium sp # 2 identified in Specimen by Organism specific culture"
},
{
"code": "44852-2",
"display": "Mycobacterium sp # 3 identified in Specimen by Organism specific culture"
},
{
"code": "44854-8",
"display": "Mycobacterium sp # 4 identified in Specimen by Organism specific culture"
},
{
"code": "44855-5",
"display": "Mycobacterium sp # 5 identified in Specimen by Organism specific culture"
},
{
"code": "50941-4",
"display": "Mycobacterium sp [Presence] in Specimen by Organism specific culture"
},
{
"code": "532-2",
"display": "Mycobacterium sp identified in Aspirate by Organism specific culture"
},
{
"code": "533-0",
"display": "Mycobacterium sp identified in Blood by Organism specific culture"
},
{
"code": "534-8",
"display": "Mycobacterium sp identified in Cerebral spinal fluid by Organism specific culture"
},
{
"code": "535-5",
"display": "Mycobacterium sp identified in Body fluid by Organism specific culture"
},
{
"code": "536-3",
"display": "Mycobacterium sp identified in Bone marrow by Organism specific culture"
},
{
"code": "537-1",
"display": "Mycobacterium sp identified in Peritoneal fluid by Organism specific culture"
},
{
"code": "538-9",
"display": "Mycobacterium sp identified in Synovial fluid by Organism specific culture"
},
{
"code": "539-7",
"display": "Mycobacterium sp identified in Sputum by Organism specific culture"
},
{
"code": "53909-8",
"display": "Mycobacterium sp identified in Pleural fluid by Organism specific culture"
},
{
"code": "540-5",
"display": "Mycobacterium sp identified in Tissue by Organism specific culture"
},
{
"code": "541-3",
"display": "Mycobacterium sp identified in Urine by Organism specific culture"
},
{
"code": "542-1",
"display": "Mycobacterium sp identified in Wound by Organism specific culture"
},
{
"code": "543-9",
"display": "Mycobacterium sp identified in Specimen by Organism specific culture"
},
{
"code": "614-8",
"display": "Mycobacterial strain [Type] in Isolate by Mycobacterial subtyping"
},
{
"code": "64412-0",
"display": "Mycobacterium sp [Presence] in Blood by Organism specific culture"
},
{
"code": "67725-2",
"display": "Mycobacterium sp identified in Isolate by HPLC"
},
{
"code": "72863-4",
"display": "Mycobacterium leprae gyrB gene fluoroquinolone resistance mutation [Presence] by Molecular method"
},
{
"code": "72868-3",
"display": "Mycobacterium leprae folP1 gene dapsone resistance mutation [Presence] by Molecular method"
},
{
"code": "72869-1",
"display": "Mycobacterium leprae gyrA gene fluoroquinolone resistance mutation [Presence] by Molecular method"
},
{
"code": "72870-9",
"display": "Mycobacterium leprae rpoB gene rifAMPin resistance mutation [Presence] by Molecular method"
},
{
"code": "76687-3",
"display": "Mycobacterium sp identified in Bronchoalveolar lavage by Organism specific culture"
},
{
"code": "77734-2",
"display": "Mycobacterium abscessus complex clarithromycin resistance erm(41) full length gene [Presence] by Molecular method"
},
{
"code": "77735-9",
"display": "Mycobacterium abscessus complex clarithromycin resistance erm(41) truncated gene [Presence] by Molecular method"
},
{
"code": "83066-1",
"display": "Mycobacterium tuberculosis complex immunogenic protein MPB64 [Presence] in Isolate by Immunoassay"
},
{
"code": "88167-2",
"display": "Mycobacterium sp identified in Cornea or Conjunctiva by Organism specific culture"
},
{
"code": "88168-0",
"display": "Mycobacterium sp identified in Ocular fluid by Organism specific culture"
},
{
"code": "88183-9",
"display": "Mycobacterium sp identified in Isolate by Sequencing"
},
{
"code": "88266-2",
"display": "Mycobacterium sp rRNA [Identifier] by Probe in Positive blood culture"
},
{
"code": "88874-3",
"display": "Mycobacterium tuberculosis complex DNA [Presence] in Isolate or Specimen by Molecular genetics method"
},
{
"code": "89636-5",
"display": "Mycobacterium sp identified in Lower respiratory specimen by Organism specific culture"
},
{
"code": "90284-1",
"display": "Mycobacterium sp identified in Bile fluid by Organism specific culture"
},
{
"code": "90433-4",
"display": "Mycobacterium preliminary growth [Presence] in Sputum by Organism specific culture"
},
{
"code": "90438-3",
"display": "Mycobacterium preliminary growth [Presence] in Tissue by Organism specific culture"
},
{
"code": "91590-0",
"display": "Mycobacterium preliminary growth [Presence] in Body fluid by Organism specific culture"
},
{
"code": "94576-6",
"display": "Mycobacterium tuberculosis complex species identified in Isolate by NAA with probe detection"
},
{
"code": "9823-6",
"display": "Mycobacterium sp identified in Bronchial specimen by Organism specific culture"
},
{
"code": "9824-4",
"display": "Mycobacterium sp identified in Gastric fluid by Organism specific culture"
},
{
"code": "9825-1",
"display": "Mycobacterium sp identified in Isolate"
}
]
}
]
},
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"timestamp": "2025-05-23T18:22:33-04:00",
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"system": "http://loinc.org",
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{
"system": "http://loinc.org",
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"display": "Mycobacterium sp # 3 identified in Specimen by Organism specific culture"
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"system": "http://loinc.org",
"version": "2.80",
"code": "44854-8",
"display": "Mycobacterium sp # 4 identified in Specimen by Organism specific culture"
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "44855-5",
"display": "Mycobacterium sp # 5 identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "50941-4",
"display": "Mycobacterium sp [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "532-2",
"display": "Mycobacterium sp identified in Aspirate by Organism specific culture"
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "533-0",
"display": "Mycobacterium sp identified in Blood by Organism specific culture"
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "534-8",
"display": "Mycobacterium sp identified in Cerebral spinal fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "535-5",
"display": "Mycobacterium sp identified in Body fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "536-3",
"display": "Mycobacterium sp identified in Bone marrow by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "537-1",
"display": "Mycobacterium sp identified in Peritoneal fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "538-9",
"display": "Mycobacterium sp identified in Synovial fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "539-7",
"display": "Mycobacterium sp identified in Sputum by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "53909-8",
"display": "Mycobacterium sp identified in Pleural fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "540-5",
"display": "Mycobacterium sp identified in Tissue by Organism specific culture"
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "541-3",
"display": "Mycobacterium sp identified in Urine by Organism specific culture"
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "542-1",
"display": "Mycobacterium sp identified in Wound by Organism specific culture"
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "543-9",
"display": "Mycobacterium sp identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "614-8",
"display": "Mycobacterial strain [Type] in Isolate by Mycobacterial subtyping"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "64412-0",
"display": "Mycobacterium sp [Presence] in Blood by Organism specific culture"
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "67725-2",
"display": "Mycobacterium sp identified in Isolate by HPLC"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "72863-4",
"display": "Mycobacterium leprae gyrB gene fluoroquinolone resistance mutation [Presence] by Molecular method"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "72868-3",
"display": "Mycobacterium leprae folP1 gene dapsone resistance mutation [Presence] by Molecular method"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "72869-1",
"display": "Mycobacterium leprae gyrA gene fluoroquinolone resistance mutation [Presence] by Molecular method"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "72870-9",
"display": "Mycobacterium leprae rpoB gene rifAMPin resistance mutation [Presence] by Molecular method"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "76687-3",
"display": "Mycobacterium sp identified in Bronchoalveolar lavage by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "77734-2",
"display": "Mycobacterium abscessus complex clarithromycin resistance erm(41) full length gene [Presence] by Molecular method"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "77735-9",
"display": "Mycobacterium abscessus complex clarithromycin resistance erm(41) truncated gene [Presence] by Molecular method"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "83066-1",
"display": "Mycobacterium tuberculosis complex immunogenic protein MPB64 [Presence] in Isolate by Immunoassay"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88167-2",
"display": "Mycobacterium sp identified in Cornea or Conjunctiva by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88168-0",
"display": "Mycobacterium sp identified in Ocular fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88183-9",
"display": "Mycobacterium sp identified in Isolate by Sequencing"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88266-2",
"display": "Mycobacterium sp rRNA [Identifier] by Probe in Positive blood culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "88874-3",
"display": "Mycobacterium tuberculosis complex DNA [Presence] in Isolate or Specimen by Molecular genetics method"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "89636-5",
"display": "Mycobacterium sp identified in Lower respiratory specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "90284-1",
"display": "Mycobacterium sp identified in Bile fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "90433-4",
"display": "Mycobacterium preliminary growth [Presence] in Sputum by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "90438-3",
"display": "Mycobacterium preliminary growth [Presence] in Tissue by Organism specific culture"
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{
"system": "http://loinc.org",
"version": "2.80",
"code": "91590-0",
"display": "Mycobacterium preliminary growth [Presence] in Body fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "94576-6",
"display": "Mycobacterium tuberculosis complex species identified in Isolate by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "9823-6",
"display": "Mycobacterium sp identified in Bronchial specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "9824-4",
"display": "Mycobacterium sp identified in Gastric fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "9825-1",
"display": "Mycobacterium sp identified in Isolate"
}
]
}
}