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FHIR IG Statistics: ValueSet/2.16.840.1.113762.1.4.1146.989

Packageus.nlm.vsac
Resource TypeValueSet
Id2.16.840.1.113762.1.4.1146.989
FHIR VersionR4
Sourcehttp://fhir.org/packages/us.nlm.vsac/https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.989/expansion
URLhttp://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.989
Version20250219
Statusactive
Date2025-02-19T01:09:45-05:00
NameTestsForMycobacteriumSpeciesByCultureAndIdentificationMethod
TitleTests for Mycobacterium species by Culture and Identification Method
Realmus
Authorityhl7
Purpose(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of Mycobacterium species in culture.),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: component: Mycobacterium culture and isolate; LOINC Search terms: ‘mycobacterium culture -dialysis’ and ‘mycobacterium isolate -panel’),(Exclusion Criteria: Mycobacterium tuberculosis)

Resources that use this resource

No resources found


Resources that this resource uses

CodeSystem
loinc.orgLOINC Code System

Narrative

No narrative content found in resource


Source

{
  "resourceType": "ValueSet",
  "id": "2.16.840.1.113762.1.4.1146.989",
  "meta": {
    "versionId": "42",
    "lastUpdated": "2025-02-19T01:09:45.000-05:00",
    "profile": [
      "http://hl7.org/fhir/StructureDefinition/shareablevalueset",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm"
    ]
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
      "valueContactDetail": {
        "name": "CSTE Author"
      }
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
      "valueString": "G_Common"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
      "valueDate": "2025-02-19"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
      "valueDate": "2025-02-19"
    }
  ],
  "url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.989",
  "identifier": [
    {
      "system": "urn:ietf:rfc:3986",
      "value": "urn:oid:2.16.840.1.113762.1.4.1146.989"
    }
  ],
  "version": "20250219",
  "name": "TestsForMycobacteriumSpeciesByCultureAndIdentificationMethod",
  "title": "Tests for Mycobacterium species by Culture and Identification Method",
  "status": "active",
  "date": "2025-02-19T01:09:45-05:00",
  "publisher": "CSTE Steward",
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "urn:iso:std:iso:3166",
          "code": "US"
        }
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  ],
  "purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of Mycobacterium species in culture.),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: component: Mycobacterium culture and isolate; \n\nLOINC Search terms: ‘mycobacterium culture -dialysis’ and  ‘mycobacterium isolate -panel’),(Exclusion Criteria: Mycobacterium tuberculosis)",
  "compose": {
    "include": [
      {
        "system": "http://loinc.org",
        "concept": [
          {
            "code": "105224-0",
            "display": "Mycobacterium sp identified in Pericardial fluid by Organism specific culture"
          },
          {
            "code": "105225-7",
            "display": "Mycobacterium sp identified in Pus by Organism specific culture"
          },
          {
            "code": "105926-0",
            "display": "Mycobacterium sp identified in Stool by Organism specific culture"
          },
          {
            "code": "20892-6",
            "display": "Mycobacterium avium ss paratuberculosis [Presence] in Tissue by Organism specific culture"
          },
          {
            "code": "20893-4",
            "display": "Mycobacterium avium ss paratuberculosis [Presence] in Stool by Organism specific culture"
          },
          {
            "code": "24427-7",
            "display": "Mycobacterium avium ss paratuberculosis [Presence] in Specimen by Organism specific culture"
          },
          {
            "code": "30045-9",
            "display": "Mycobacterium sp identified in Dialysis fluid by Organism specific culture"
          },
          {
            "code": "42716-1",
            "display": "Mycobacterium sp rRNA [Identifier] in Isolate by NAA with probe detection"
          },
          {
            "code": "44851-4",
            "display": "Mycobacterium sp # 2 identified in Specimen by Organism specific culture"
          },
          {
            "code": "44852-2",
            "display": "Mycobacterium sp # 3 identified in Specimen by Organism specific culture"
          },
          {
            "code": "44854-8",
            "display": "Mycobacterium sp # 4 identified in Specimen by Organism specific culture"
          },
          {
            "code": "44855-5",
            "display": "Mycobacterium sp # 5 identified in Specimen by Organism specific culture"
          },
          {
            "code": "50941-4",
            "display": "Mycobacterium sp [Presence] in Specimen by Organism specific culture"
          },
          {
            "code": "532-2",
            "display": "Mycobacterium sp identified in Aspirate by Organism specific culture"
          },
          {
            "code": "533-0",
            "display": "Mycobacterium sp identified in Blood by Organism specific culture"
          },
          {
            "code": "534-8",
            "display": "Mycobacterium sp identified in Cerebral spinal fluid by Organism specific culture"
          },
          {
            "code": "535-5",
            "display": "Mycobacterium sp identified in Body fluid by Organism specific culture"
          },
          {
            "code": "536-3",
            "display": "Mycobacterium sp identified in Bone marrow by Organism specific culture"
          },
          {
            "code": "537-1",
            "display": "Mycobacterium sp identified in Peritoneal fluid by Organism specific culture"
          },
          {
            "code": "538-9",
            "display": "Mycobacterium sp identified in Synovial fluid by Organism specific culture"
          },
          {
            "code": "539-7",
            "display": "Mycobacterium sp identified in Sputum by Organism specific culture"
          },
          {
            "code": "53909-8",
            "display": "Mycobacterium sp identified in Pleural fluid by Organism specific culture"
          },
          {
            "code": "540-5",
            "display": "Mycobacterium sp identified in Tissue by Organism specific culture"
          },
          {
            "code": "541-3",
            "display": "Mycobacterium sp identified in Urine by Organism specific culture"
          },
          {
            "code": "542-1",
            "display": "Mycobacterium sp identified in Wound by Organism specific culture"
          },
          {
            "code": "543-9",
            "display": "Mycobacterium sp identified in Specimen by Organism specific culture"
          },
          {
            "code": "614-8",
            "display": "Mycobacterial strain [Type] in Isolate by Mycobacterial subtyping"
          },
          {
            "code": "64412-0",
            "display": "Mycobacterium sp [Presence] in Blood by Organism specific culture"
          },
          {
            "code": "67725-2",
            "display": "Mycobacterium sp identified in Isolate by HPLC"
          },
          {
            "code": "76687-3",
            "display": "Mycobacterium sp identified in Bronchoalveolar lavage by Organism specific culture"
          },
          {
            "code": "88167-2",
            "display": "Mycobacterium sp identified in Cornea or Conjunctiva by Organism specific culture"
          },
          {
            "code": "88168-0",
            "display": "Mycobacterium sp identified in Ocular fluid by Organism specific culture"
          },
          {
            "code": "88183-9",
            "display": "Mycobacterium sp identified in Isolate by Sequencing"
          },
          {
            "code": "88266-2",
            "display": "Mycobacterium sp rRNA [Identifier] by Probe in Positive blood culture"
          },
          {
            "code": "89636-5",
            "display": "Mycobacterium sp identified in Lower respiratory specimen by Organism specific culture"
          },
          {
            "code": "89637-3",
            "display": "Mycobacterium sp identified in Implanted device by Organism specific culture"
          },
          {
            "code": "90284-1",
            "display": "Mycobacterium sp identified in Bile fluid by Organism specific culture"
          },
          {
            "code": "90306-2",
            "display": "Mycobacterium sp identified in Specimen by Sequencing"
          },
          {
            "code": "90433-4",
            "display": "Mycobacterium preliminary growth [Presence] in Sputum by Organism specific culture"
          },
          {
            "code": "90438-3",
            "display": "Mycobacterium preliminary growth [Presence] in Tissue by Organism specific culture"
          },
          {
            "code": "91590-0",
            "display": "Mycobacterium preliminary growth [Presence] in Body fluid by Organism specific culture"
          },
          {
            "code": "97758-7",
            "display": "Fungus and Mycobacterium sp identified in Blood by Organism specific culture"
          },
          {
            "code": "9823-6",
            "display": "Mycobacterium sp identified in Bronchial specimen by Organism specific culture"
          },
          {
            "code": "9824-4",
            "display": "Mycobacterium sp identified in Gastric fluid by Organism specific culture"
          },
          {
            "code": "9825-1",
            "display": "Mycobacterium sp identified in Isolate"
          }
        ]
      }
    ]
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  "expansion": {
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    "timestamp": "2025-05-23T18:56:57-04:00",
    "total": 45,
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        "system": "http://loinc.org",
        "version": "2.80",
        "code": "105224-0",
        "display": "Mycobacterium sp identified in Pericardial fluid by Organism specific culture"
      },
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        "system": "http://loinc.org",
        "version": "2.80",
        "code": "105225-7",
        "display": "Mycobacterium sp identified in Pus by Organism specific culture"
      },
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        "system": "http://loinc.org",
        "version": "2.80",
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        "display": "Mycobacterium sp identified in Stool by Organism specific culture"
      },
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        "system": "http://loinc.org",
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        "code": "20892-6",
        "display": "Mycobacterium avium ss paratuberculosis [Presence] in Tissue by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "20893-4",
        "display": "Mycobacterium avium ss paratuberculosis [Presence] in Stool by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "24427-7",
        "display": "Mycobacterium avium ss paratuberculosis [Presence] in Specimen by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "30045-9",
        "display": "Mycobacterium sp identified in Dialysis fluid by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "42716-1",
        "display": "Mycobacterium sp rRNA [Identifier] in Isolate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "44851-4",
        "display": "Mycobacterium sp # 2 identified in Specimen by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "44852-2",
        "display": "Mycobacterium sp # 3 identified in Specimen by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "44854-8",
        "display": "Mycobacterium sp # 4 identified in Specimen by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "44855-5",
        "display": "Mycobacterium sp # 5 identified in Specimen by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "50941-4",
        "display": "Mycobacterium sp [Presence] in Specimen by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "532-2",
        "display": "Mycobacterium sp identified in Aspirate by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "533-0",
        "display": "Mycobacterium sp identified in Blood by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "534-8",
        "display": "Mycobacterium sp identified in Cerebral spinal fluid by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "535-5",
        "display": "Mycobacterium sp identified in Body fluid by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "536-3",
        "display": "Mycobacterium sp identified in Bone marrow by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "537-1",
        "display": "Mycobacterium sp identified in Peritoneal fluid by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "538-9",
        "display": "Mycobacterium sp identified in Synovial fluid by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "539-7",
        "display": "Mycobacterium sp identified in Sputum by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "53909-8",
        "display": "Mycobacterium sp identified in Pleural fluid by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "540-5",
        "display": "Mycobacterium sp identified in Tissue by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "541-3",
        "display": "Mycobacterium sp identified in Urine by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "542-1",
        "display": "Mycobacterium sp identified in Wound by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "543-9",
        "display": "Mycobacterium sp identified in Specimen by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "614-8",
        "display": "Mycobacterial strain [Type] in Isolate by Mycobacterial subtyping"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "64412-0",
        "display": "Mycobacterium sp [Presence] in Blood by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "67725-2",
        "display": "Mycobacterium sp identified in Isolate by HPLC"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "76687-3",
        "display": "Mycobacterium sp identified in Bronchoalveolar lavage by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88167-2",
        "display": "Mycobacterium sp identified in Cornea or Conjunctiva by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88168-0",
        "display": "Mycobacterium sp identified in Ocular fluid by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88183-9",
        "display": "Mycobacterium sp identified in Isolate by Sequencing"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88266-2",
        "display": "Mycobacterium sp rRNA [Identifier] by Probe in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "89636-5",
        "display": "Mycobacterium sp identified in Lower respiratory specimen by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "89637-3",
        "display": "Mycobacterium sp identified in Implanted device by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "90284-1",
        "display": "Mycobacterium sp identified in Bile fluid by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "90306-2",
        "display": "Mycobacterium sp identified in Specimen by Sequencing"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "90433-4",
        "display": "Mycobacterium preliminary growth [Presence] in Sputum by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "90438-3",
        "display": "Mycobacterium preliminary growth [Presence] in Tissue by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "91590-0",
        "display": "Mycobacterium preliminary growth [Presence] in Body fluid by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "97758-7",
        "display": "Fungus and Mycobacterium sp identified in Blood by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "9823-6",
        "display": "Mycobacterium sp identified in Bronchial specimen by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "9824-4",
        "display": "Mycobacterium sp identified in Gastric fluid by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "9825-1",
        "display": "Mycobacterium sp identified in Isolate"
      }
    ]
  }
}