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FHIR IG Statistics: ValueSet/2.16.840.1.113762.1.4.1146.878

Packageus.nlm.vsac
Resource TypeValueSet
Id2.16.840.1.113762.1.4.1146.878
FHIR VersionR4
Sourcehttp://fhir.org/packages/us.nlm.vsac/https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.878/expansion
URLhttp://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.878
Version20230122
Statusactive
Date2023-01-22T01:03:33-05:00
NameMERSTestsForMERS_CoVNucleicAcid
TitleMERS (Tests for MERS_CoV Nucleic Acid)
Realmus
Authorityhl7
Purpose(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of MERS coronavirus nucleic acid.),(Data Element Scope: Laboratory tests names that were ordered or observed),(Inclusion Criteria: component: Middle East respiratory syndrome coronavirus nucleic acid; LOINC search: 'Middle East respiratory syndrome coronavirus -interpretation -panel'),(Exclusion Criteria: interpretation test/ panel test)

Resources that use this resource

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Resources that this resource uses

CodeSystem
loinc.orgLOINC Code System

Narrative

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Source

{
  "resourceType": "ValueSet",
  "id": "2.16.840.1.113762.1.4.1146.878",
  "meta": {
    "versionId": "25",
    "lastUpdated": "2023-12-21T17:43:03.000-05:00",
    "profile": [
      "http://hl7.org/fhir/StructureDefinition/shareablevalueset",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm"
    ]
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
      "valueContactDetail": {
        "name": "CSTE Author"
      }
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
      "valueString": "G_Respiratory,MERS,Trigger"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
      "valueDate": "2024-06-05"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
      "valueDate": "2023-01-22"
    }
  ],
  "url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.878",
  "identifier": [
    {
      "system": "urn:ietf:rfc:3986",
      "value": "urn:oid:2.16.840.1.113762.1.4.1146.878"
    }
  ],
  "version": "20230122",
  "name": "MERSTestsForMERS_CoVNucleicAcid",
  "title": "MERS (Tests for MERS_CoV Nucleic Acid)",
  "status": "active",
  "date": "2023-01-22T01:03:33-05:00",
  "publisher": "CSTE Steward",
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "urn:iso:std:iso:3166",
          "code": "US"
        }
      ]
    }
  ],
  "purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of MERS coronavirus nucleic acid.),(Data Element Scope: Laboratory tests names that were ordered or observed),(Inclusion Criteria: component: Middle East respiratory syndrome coronavirus nucleic acid;  \n\nLOINC search: 'Middle East respiratory syndrome coronavirus -interpretation -panel'),(Exclusion Criteria: interpretation test/ panel test)",
  "compose": {
    "include": [
      {
        "system": "http://loinc.org",
        "concept": [
          {
            "code": "74472-2",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) N3 gene RNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "74473-0",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) N2 gene RNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "74474-8",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) upE gene RNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "74475-5",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Interpretation] in Specimen Qualitative by NAA with probe detection"
          },
          {
            "code": "86578-2",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Blood by NAA with probe detection"
          },
          {
            "code": "86579-0",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Urine by NAA with probe detection"
          },
          {
            "code": "88196-1",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Stool by NAA with probe detection"
          },
          {
            "code": "88197-9",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Nasopharynx by NAA with probe detection"
          },
          {
            "code": "88198-7",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection"
          },
          {
            "code": "88199-5",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Aspirate by NAA with probe detection"
          },
          {
            "code": "88889-1",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Nasopharynx by NAA with non-probe detection"
          },
          {
            "code": "91807-8",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Upper respiratory specimen by NAA with probe detection"
          },
          {
            "code": "91830-0",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Lower respiratory specimen by NAA with probe detection"
          },
          {
            "code": "92967-9",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Lower respiratory specimen by NAA with non-probe detection"
          },
          {
            "code": "94501-4",
            "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Respiratory specimen by NAA with probe detection"
          }
        ]
      }
    ]
  },
  "expansion": {
    "identifier": "urn:uuid:19326da7-d3b9-452f-aaea-dedeb3acb55b",
    "timestamp": "2025-05-23T18:55:41-04:00",
    "total": 15,
    "contains": [
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "74472-2",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) N3 gene RNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "74473-0",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) N2 gene RNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "74474-8",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) upE gene RNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "74475-5",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Interpretation] in Specimen Qualitative by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "86578-2",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Blood by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "86579-0",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Urine by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88196-1",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Stool by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88197-9",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Nasopharynx by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88198-7",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88199-5",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Aspirate by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88889-1",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Nasopharynx by NAA with non-probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "91807-8",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Upper respiratory specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "91830-0",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Lower respiratory specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92967-9",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Lower respiratory specimen by NAA with non-probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "94501-4",
        "display": "Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Respiratory system specimen by NAA with probe detection"
      }
    ]
  }
}