FHIR © HL7.org  |  Server Home  |  XIG Home  |  XIG Stats  |  Server Source  |  FHIR  

FHIR IG Statistics: ValueSet/2.16.840.1.113762.1.4.1146.427

Packageus.nlm.vsac
Resource TypeValueSet
Id2.16.840.1.113762.1.4.1146.427
FHIR VersionR4
Sourcehttp://fhir.org/packages/us.nlm.vsac/https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.427/expansion
URLhttp://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.427
Version20240619
Statusactive
Date2024-06-19T01:24:12-04:00
NameSTECInfectionTestsForShigaToxinGenesOrSTECEHECOrEColiO157NucleicAcid
TitleSTEC Infection (Tests for Shiga toxin genes, or STEC, EHEC, or E. coli O157 Nucleic Acid)
Realmus
Authorityhl7
Purpose(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of Shiga toxin genes, or STEC, EHEC, or E. coli O157 nucleic acid),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: component: Escherichia coli O157 probe; Escherichia coli O157:H7 probe; Escherichia coli shiga-like toxin; shiga toxin probe; LOINC search: "(O157 or shiga or enterohemorrhagic or verotoxic) nucleic -isolate -culture -milk -panel”),(Exclusion Criteria: none)

Resources that use this resource

No resources found


Resources that this resource uses

CodeSystem
loinc.orgLOINC Code System

Narrative

No narrative content found in resource


Source

{
  "resourceType": "ValueSet",
  "id": "2.16.840.1.113762.1.4.1146.427",
  "meta": {
    "versionId": "38",
    "lastUpdated": "2024-06-19T01:24:11.000-04:00",
    "profile": [
      "http://hl7.org/fhir/StructureDefinition/shareablevalueset",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm"
    ]
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
      "valueContactDetail": {
        "name": "CSTE Author"
      }
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
      "valueString": "G_Enteric,STEC,Trigger"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
      "valueDate": "2024-06-19"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
      "valueDate": "2024-06-19"
    }
  ],
  "url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.427",
  "identifier": [
    {
      "system": "urn:ietf:rfc:3986",
      "value": "urn:oid:2.16.840.1.113762.1.4.1146.427"
    }
  ],
  "version": "20240619",
  "name": "STECInfectionTestsForShigaToxinGenesOrSTECEHECOrEColiO157NucleicAcid",
  "title": "STEC Infection (Tests for Shiga toxin genes, or STEC, EHEC, or E. coli O157 Nucleic Acid)",
  "status": "active",
  "date": "2024-06-19T01:24:12-04:00",
  "publisher": "CSTE Steward",
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "urn:iso:std:iso:3166",
          "code": "US"
        }
      ]
    }
  ],
  "purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of Shiga toxin genes, or STEC, EHEC, or E. coli O157 nucleic acid),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: component: Escherichia coli O157 probe; Escherichia coli O157:H7 probe; Escherichia coli shiga-like toxin; shiga toxin probe;  \n\nLOINC search: \"(O157 or shiga or enterohemorrhagic or verotoxic) nucleic -isolate -culture -milk -panel”),(Exclusion Criteria: none)",
  "compose": {
    "include": [
      {
        "system": "http://loinc.org",
        "concept": [
          {
            "code": "103555-9",
            "display": "Escherichia coli O157:H7 DNA [Presence] in Wound by NAA with probe detection"
          },
          {
            "code": "33764-2",
            "display": "Shiga toxin stx gene [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code": "38990-8",
            "display": "Escherichia coli O157:H7 DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "44088-3",
            "display": "Escherichia coli O157:H7 DNA [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code": "53947-8",
            "display": "Escherichia coli Stx1 and Stx2 toxin stx1 and stx2 and H7 flagellar fliC genes [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code": "63427-9",
            "display": "Escherichia coli Stx1 toxin stx1 gene [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "63428-7",
            "display": "Escherichia coli Stx2 toxin stx2 gene [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "79386-9",
            "display": "Escherichia coli Stx1 toxin stx1 gene [Presence] in Stool by NAA with probe detection"
          },
          {
            "code": "79387-7",
            "display": "Escherichia coli Stx2 toxin stx2 gene [Presence] in Stool by NAA with probe detection"
          },
          {
            "code": "80676-0",
            "display": "Escherichia coli O157 rfbE gene [Presence] in Stool by NAA with probe detection"
          },
          {
            "code": "80679-4",
            "display": "Escherichia coli Stx1 and Stx2 toxin stx1+stx2 genes [Presence] in Stool by NAA with probe detection"
          },
          {
            "code": "81285-9",
            "display": "Escherichia coli Stx1 and Stx2 toxin stx1 and stx2 genes [Identifier] in Stool by NAA with probe detection"
          },
          {
            "code": "82203-1",
            "display": "Escherichia coli Stx1 and Stx2 toxin stx1+stx2 genes [Presence] in Stool by NAA with non-probe detection"
          },
          {
            "code": "82204-9",
            "display": "Escherichia coli O157 DNA [Presence] in Stool by NAA with non-probe detection"
          },
          {
            "code": "97320-6",
            "display": "Escherichia coli O157 DNA [Presence] in Stool by NAA with probe detection"
          }
        ]
      }
    ]
  },
  "expansion": {
    "identifier": "urn:uuid:491cea93-69c7-4204-b4e0-d552f46c2833",
    "timestamp": "2025-05-23T18:50:48-04:00",
    "total": 15,
    "contains": [
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "103555-9",
        "display": "Escherichia coli O157:H7 DNA [Presence] in Wound by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "33764-2",
        "display": "Shiga toxin stx gene [Identifier] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "38990-8",
        "display": "Escherichia coli O157:H7 DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "44088-3",
        "display": "Escherichia coli O157:H7 DNA [Identifier] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "53947-8",
        "display": "Escherichia coli Stx1 and Stx2 toxin stx1 and stx2 and H7 flagellar fliC genes [Identifier] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "63427-9",
        "display": "Escherichia coli Stx1 toxin stx1 gene [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "63428-7",
        "display": "Escherichia coli Stx2 toxin stx2 gene [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "79386-9",
        "display": "Escherichia coli Stx1 toxin stx1 gene [Presence] in Stool by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "79387-7",
        "display": "Escherichia coli Stx2 toxin stx2 gene [Presence] in Stool by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "80676-0",
        "display": "Escherichia coli O157 rfbE gene [Presence] in Stool by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "80679-4",
        "display": "Escherichia coli Stx1 and Stx2 toxin stx1+stx2 genes [Presence] in Stool by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "81285-9",
        "display": "Escherichia coli Stx1 and Stx2 toxin stx1 and stx2 genes [Identifier] in Stool by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "82203-1",
        "display": "Escherichia coli Stx1 and Stx2 toxin stx1+stx2 genes [Presence] in Stool by NAA with non-probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "82204-9",
        "display": "Escherichia coli O157 DNA [Presence] in Stool by NAA with non-probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "97320-6",
        "display": "Escherichia coli O157 DNA [Presence] in Stool by NAA with probe detection"
      }
    ]
  }
}