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FHIR IG Statistics: ValueSet/2.16.840.1.113762.1.4.1146.2244

Packageus.nlm.vsac
Resource TypeValueSet
Id2.16.840.1.113762.1.4.1146.2244
FHIR VersionR4
Sourcehttp://fhir.org/packages/us.nlm.vsac/https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.2244/expansion
URLhttp://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.2244
Version20250219
Statusactive
Date2025-02-19T01:09:45-05:00
NameCandidaSpeciesTestsByCultureAndIdentificationMethod
TitleCandida species (Tests by Culture and Identification Method)
Realmus
Authorityhl7
Purpose(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of Candida species),(Data Element Scope: Laboratory tests names that were ordered or observed),(Inclusion Criteria: component: Candida species culture or isolate),(Exclusion Criteria: none)

Resources that use this resource

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Resources that this resource uses

CodeSystem
loinc.orgLOINC Code System

Narrative

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Source

{
  "resourceType": "ValueSet",
  "id": "2.16.840.1.113762.1.4.1146.2244",
  "meta": {
    "versionId": "11",
    "lastUpdated": "2025-02-19T01:09:45.000-05:00",
    "profile": [
      "http://hl7.org/fhir/StructureDefinition/shareablevalueset",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm"
    ]
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
      "valueContactDetail": {
        "name": "CSTE Author"
      }
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
      "valueString": "G_Common"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
      "valueDate": "2025-02-19"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
      "valueDate": "2025-02-19"
    }
  ],
  "url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.2244",
  "identifier": [
    {
      "system": "urn:ietf:rfc:3986",
      "value": "urn:oid:2.16.840.1.113762.1.4.1146.2244"
    }
  ],
  "version": "20250219",
  "name": "CandidaSpeciesTestsByCultureAndIdentificationMethod",
  "title": "Candida species (Tests by Culture and Identification Method)",
  "status": "active",
  "date": "2025-02-19T01:09:45-05:00",
  "publisher": "CSTE Steward",
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "urn:iso:std:iso:3166",
          "code": "US"
        }
      ]
    }
  ],
  "purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of Candida species),(Data Element Scope: Laboratory tests names that were ordered or observed),(Inclusion Criteria: component: Candida species culture or isolate),(Exclusion Criteria: none)",
  "compose": {
    "include": [
      {
        "system": "http://loinc.org",
        "concept": [
          {
            "code": "105806-4",
            "display": "Candida auris DNA [Cycle Threshold #] in Positive blood culture by NAA with probe detection"
          },
          {
            "code": "106410-4",
            "display": "Candida spp. 1 DNA [Cycle Threshold #] in Positive blood culture by NAA with probe detection"
          },
          {
            "code": "106411-2",
            "display": "Candida spp. 2 DNA [Cycle Threshold #] in Positive blood culture by NAA with probe detection"
          },
          {
            "code": "553-8",
            "display": "Candida sp identified in Saliva (oral fluid) by Organism specific culture"
          },
          {
            "code": "554-6",
            "display": "Candida sp identified in Stool by Organism specific culture"
          },
          {
            "code": "555-3",
            "display": "Candida sp identified in Specimen by Organism specific culture"
          },
          {
            "code": "73962-3",
            "display": "Candida sp rRNA [Identifier] by FISH in Positive blood culture"
          },
          {
            "code": "85781-3",
            "display": "Candida albicans DNA [Presence] by NAA with non-probe detection in Positive blood culture"
          },
          {
            "code": "85782-1",
            "display": "Candida glabrata DNA [Presence] by NAA with non-probe detection in Positive blood culture"
          },
          {
            "code": "85783-9",
            "display": "Candida krusei DNA [Presence] by NAA with non-probe detection in Positive blood culture"
          },
          {
            "code": "85784-7",
            "display": "Candida parapsilosis DNA [Presence] by NAA with non-probe detection in Positive blood culture"
          },
          {
            "code": "85785-4",
            "display": "Candida tropicalis DNA [Presence] by NAA with non-probe detection in Positive blood culture"
          },
          {
            "code": "88717-4",
            "display": "Candida sp identified in Isolate"
          },
          {
            "code": "90002-7",
            "display": "Candida auris [Presence] in Specimen by Organism specific culture"
          },
          {
            "code": "92768-1",
            "display": "Candida albicans+glabrata+krusei+parapsilosis DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "92790-5",
            "display": "Candida albicans DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "92791-3",
            "display": "Candida auris DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "92792-1",
            "display": "Candida dubliniensis DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "92793-9",
            "display": "Candida famata DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "92794-7",
            "display": "Candida glabrata DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "92795-4",
            "display": "Candida guilliermondii DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "92796-2",
            "display": "Candida kefyr DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "92797-0",
            "display": "Candida krusei DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "92798-8",
            "display": "Candida lusitaniae DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "92799-6",
            "display": "Candida parapsilosis DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "92800-2",
            "display": "Candida tropicalis DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code": "94419-9",
            "display": "Candida auris [Presence] in Isolate by MS.MALDI-TOF"
          },
          {
            "code": "96302-5",
            "display": "Candida auris DNA [Presence] by NAA with non-probe detection in Positive blood culture"
          },
          {
            "code": "98393-2",
            "display": "Candida sp [Identifier] in Isolate by Sequencing"
          },
          {
            "code": "98394-0",
            "display": "Candida sp [Identifier] in Isolate by MS.MALDI-TOF"
          }
        ]
      }
    ]
  },
  "expansion": {
    "identifier": "urn:uuid:192c1946-d7cb-4e90-bbe0-4d512dd47bc1",
    "timestamp": "2025-05-23T18:41:04-04:00",
    "total": 30,
    "contains": [
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "105806-4",
        "display": "Candida auris DNA [Cycle Threshold #] in Positive blood culture by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "106410-4",
        "display": "Candida spp. 1 DNA [Cycle Threshold #] in Positive blood culture by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "106411-2",
        "display": "Candida spp. 2 DNA [Cycle Threshold #] in Positive blood culture by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "553-8",
        "display": "Candida sp identified in Saliva (oral fluid) by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "554-6",
        "display": "Candida sp identified in Stool by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "555-3",
        "display": "Candida sp identified in Specimen by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "73962-3",
        "display": "Candida sp rRNA [Identifier] by FISH in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "85781-3",
        "display": "Candida albicans DNA [Presence] by NAA with non-probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "85782-1",
        "display": "Candida glabrata DNA [Presence] by NAA with non-probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "85783-9",
        "display": "Candida krusei DNA [Presence] by NAA with non-probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "85784-7",
        "display": "Candida parapsilosis DNA [Presence] by NAA with non-probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "85785-4",
        "display": "Candida tropicalis DNA [Presence] by NAA with non-probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "88717-4",
        "display": "Candida sp identified in Isolate"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "90002-7",
        "display": "Candida auris [Presence] in Specimen by Organism specific culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92768-1",
        "display": "Candida albicans+glabrata+krusei+parapsilosis DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92790-5",
        "display": "Candida albicans DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92791-3",
        "display": "Candida auris DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92792-1",
        "display": "Candida dubliniensis DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92793-9",
        "display": "Candida famata DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92794-7",
        "display": "Candida glabrata DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92795-4",
        "display": "Candida guilliermondii DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92796-2",
        "display": "Candida kefyr DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92797-0",
        "display": "Candida krusei DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92798-8",
        "display": "Candida lusitaniae DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92799-6",
        "display": "Candida parapsilosis DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92800-2",
        "display": "Candida tropicalis DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "94419-9",
        "display": "Candida auris [Presence] in Isolate by MS.MALDI-TOF"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "96302-5",
        "display": "Candida auris DNA [Presence] by NAA with non-probe detection in Positive blood culture"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "98393-2",
        "display": "Candida sp identified in Isolate by Sequencing"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "98394-0",
        "display": "Candida sp identified in Isolate by MS.MALDI-TOF"
      }
    ]
  }
}