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FHIR IG Statistics: ValueSet/2.16.840.1.113762.1.4.1146.2173

Packageus.nlm.vsac
Resource TypeValueSet
Id2.16.840.1.113762.1.4.1146.2173
FHIR VersionR4
Sourcehttp://fhir.org/packages/us.nlm.vsac/https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.2173/expansion
URLhttp://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.2173
Version20240620
Statusactive
Date2024-06-20T01:22:57-04:00
NameBacteriaCausingEncephalitisTestsForBacteriaCausingEncephalitisNucleicAcidInUnspecifiedSpecimen
TitleBacteria [Causing Encephalitis] (Tests for Bacteria Causing Encephalitis Nucleic Acid in Unspecified Specimen)
Realmus
Authorityhl7
Purpose(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the Nucleic Acid of Encephalitis-causing Bacteria.),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: Encephalitis-causing Bacteria),(Exclusion Criteria: none)

Resources that use this resource

No resources found


Resources that this resource uses

CodeSystem
loinc.orgLOINC Code System

Narrative

No narrative content found in resource


Source

{
  "resourceType": "ValueSet",
  "id": "2.16.840.1.113762.1.4.1146.2173",
  "meta": {
    "versionId": "15",
    "lastUpdated": "2024-06-20T01:22:57.000-04:00",
    "profile": [
      "http://hl7.org/fhir/StructureDefinition/shareablevalueset",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm"
    ]
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
      "valueContactDetail": {
        "name": "CSTE Author"
      }
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
      "valueString": "Encephalitis,Trigger"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
      "valueDate": "2024-06-20"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
      "valueDate": "2024-06-20"
    }
  ],
  "url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.2173",
  "identifier": [
    {
      "system": "urn:ietf:rfc:3986",
      "value": "urn:oid:2.16.840.1.113762.1.4.1146.2173"
    }
  ],
  "version": "20240620",
  "name": "BacteriaCausingEncephalitisTestsForBacteriaCausingEncephalitisNucleicAcidInUnspecifiedSpecimen",
  "title": "Bacteria [Causing Encephalitis] (Tests for Bacteria Causing Encephalitis Nucleic Acid in Unspecified Specimen)",
  "status": "active",
  "date": "2024-06-20T01:22:57-04:00",
  "publisher": "CSTE Steward",
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "urn:iso:std:iso:3166",
          "code": "US"
        }
      ]
    }
  ],
  "purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the Nucleic Acid of Encephalitis-causing Bacteria.),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: Encephalitis-causing Bacteria),(Exclusion Criteria: none)",
  "compose": {
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        "system": "http://loinc.org",
        "concept": [
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            "code": "13956-8",
            "display": "Mycobacterium tuberculosis DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "17296-5",
            "display": "Mycobacterium tuberculosis complex rRNA [Presence] in Specimen by Probe"
          },
          {
            "code": "17546-3",
            "display": "Bartonella quintana rRNA [Presence] in Specimen by Probe"
          },
          {
            "code": "22926-0",
            "display": "Brucella abortus rRNA [Presence] in Specimen by Probe"
          },
          {
            "code": "22927-8",
            "display": "Brucella abortus DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "22936-9",
            "display": "Brucella melitensis DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "22954-2",
            "display": "Brucella suis rRNA [Presence] in Specimen by Probe"
          },
          {
            "code": "22955-9",
            "display": "Brucella suis DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "23024-3",
            "display": "Coxiella burnetii DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "24042-4",
            "display": "Ehrlichia chaffeensis DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "29257-3",
            "display": "Mycoplasma pneumoniae DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "29560-0",
            "display": "Anaplasma phagocytophilum DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "33986-1",
            "display": "Bartonella henselae DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "38379-4",
            "display": "Mycobacterium tuberculosis complex DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "41625-5",
            "display": "Brucella sp DNA [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code": "41626-3",
            "display": "Brucella sp DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "46725-8",
            "display": "Tropheryma whipplei DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "48174-7",
            "display": "Mycobacterium tuberculosis complex rRNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "48683-7",
            "display": "Streptococcus agalactiae DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "48863-5",
            "display": "Rickettsia sp DNA [Identifier] in Specimen by RFLP"
          },
          {
            "code": "48864-3",
            "display": "Bartonella sp DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "48865-0",
            "display": "Ehrlichia ewingii DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "48866-8",
            "display": "Ehrlichia sp DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "48868-4",
            "display": "Rickettsia rickettsii DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "48869-2",
            "display": "Rickettsia sp DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "49123-3",
            "display": "Bartonella sp identified in Specimen by Sequencing"
          },
          {
            "code": "49124-1",
            "display": "Coxiella burnetii identified in Specimen by Sequencing"
          },
          {
            "code": "49125-8",
            "display": "Ehrlichia sp identified in Specimen by Sequencing"
          },
          {
            "code": "49127-4",
            "display": "Rickettsia sp identified in Specimen by Sequencing"
          },
          {
            "code": "49610-9",
            "display": "Streptococcus pyogenes DNA [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code": "4991-6",
            "display": "Borrelia burgdorferi DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "5021-1",
            "display": "Listeria monocytogenes rRNA [Presence] in Specimen by Probe"
          },
          {
            "code": "5027-8",
            "display": "Mycobacterium tuberculosis rRNA [Presence] in Specimen by Probe"
          },
          {
            "code": "5034-4",
            "display": "Streptococcus agalactiae rRNA [Presence] in Specimen by Probe"
          },
          {
            "code": "5036-9",
            "display": "Streptococcus pyogenes rRNA [Presence] in Specimen by Probe"
          },
          {
            "code": "53255-6",
            "display": "Mycoplasma pneumoniae DNA [#/volume] in Specimen by NAA with probe detection"
          },
          {
            "code": "53257-2",
            "display": "Mycobacterium tuberculosis DNA [#/volume] in Specimen by NAA with probe detection"
          },
          {
            "code": "57910-2",
            "display": "Bartonella quintana DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "61369-5",
            "display": "Listeria monocytogenes DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "6483-2",
            "display": "Mycoplasma pneumoniae rRNA [Presence] in Specimen by Probe"
          },
          {
            "code": "67726-0",
            "display": "Rickettsia sp DNA [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code": "72268-6",
            "display": "Streptococcus pyogenes exotoxin B speB gene [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code": "92827-5",
            "display": "Mycobacterium tuberculosis complex species identified in Specimen by Sequencing"
          },
          {
            "code": "94250-8",
            "display": "Borrelia burgdorferi oppA2 gene [Presence] in Specimen by NAA with non-probe detection"
          },
          {
            "code": "94634-3",
            "display": "Coxiella burnetii DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code": "97206-7",
            "display": "Tropheryma whipplei DNA [Presence] in Specimen by NAA with non-probe detection"
          }
        ]
      }
    ]
  },
  "expansion": {
    "identifier": "urn:uuid:96ec2173-a09b-4709-95e1-9d24970f7282",
    "timestamp": "2025-05-23T18:39:16-04:00",
    "total": 46,
    "contains": [
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "13956-8",
        "display": "Mycobacterium tuberculosis DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "17296-5",
        "display": "Mycobacterium tuberculosis complex rRNA [Presence] in Specimen by Probe"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "17546-3",
        "display": "Bartonella quintana rRNA [Presence] in Specimen by Probe"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "22926-0",
        "display": "Brucella abortus rRNA [Presence] in Specimen by Probe"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "22927-8",
        "display": "Brucella abortus DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "22936-9",
        "display": "Brucella melitensis DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "22954-2",
        "display": "Brucella suis rRNA [Presence] in Specimen by Probe"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "22955-9",
        "display": "Brucella suis DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "23024-3",
        "display": "Coxiella burnetii DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "24042-4",
        "display": "Ehrlichia chaffeensis DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "29257-3",
        "display": "Mycoplasma pneumoniae DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "29560-0",
        "display": "Anaplasma phagocytophilum DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "33986-1",
        "display": "Bartonella henselae DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "38379-4",
        "display": "Mycobacterium tuberculosis complex DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "41625-5",
        "display": "Brucella sp DNA [Identifier] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "41626-3",
        "display": "Brucella sp DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "46725-8",
        "display": "Tropheryma whipplei DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "48174-7",
        "display": "Mycobacterium tuberculosis complex rRNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "48683-7",
        "display": "Streptococcus agalactiae DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "48863-5",
        "display": "Rickettsia sp DNA [Identifier] in Specimen by RFLP"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "48864-3",
        "display": "Bartonella sp DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "48865-0",
        "display": "Ehrlichia ewingii DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "48866-8",
        "display": "Ehrlichia sp DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "48868-4",
        "display": "Rickettsia rickettsii DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "48869-2",
        "display": "Rickettsia sp DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "49123-3",
        "display": "Bartonella sp identified in Specimen by Sequencing"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "49124-1",
        "display": "Coxiella burnetii identified in Specimen by Sequencing"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "49125-8",
        "display": "Ehrlichia sp identified in Specimen by Sequencing"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "49127-4",
        "display": "Rickettsia sp identified in Specimen by Sequencing"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "49610-9",
        "display": "Streptococcus pyogenes DNA [Identifier] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "4991-6",
        "display": "Borrelia burgdorferi DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "5021-1",
        "display": "Listeria monocytogenes rRNA [Presence] in Specimen by Probe"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "5027-8",
        "display": "Mycobacterium tuberculosis rRNA [Presence] in Specimen by Probe"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "5034-4",
        "display": "Streptococcus agalactiae rRNA [Presence] in Specimen by Probe"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "5036-9",
        "display": "Streptococcus pyogenes rRNA [Presence] in Specimen by Probe"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "53255-6",
        "display": "Mycoplasma pneumoniae DNA [#/volume] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "53257-2",
        "display": "Mycobacterium tuberculosis DNA [#/volume] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "57910-2",
        "display": "Bartonella quintana DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "61369-5",
        "display": "Listeria monocytogenes DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "6483-2",
        "display": "Mycoplasma pneumoniae rRNA [Presence] in Specimen by Probe"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "67726-0",
        "display": "Rickettsia sp DNA [Identifier] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "72268-6",
        "display": "Streptococcus pyogenes exotoxin B speB gene [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "92827-5",
        "display": "Mycobacterium tuberculosis complex species identified in Specimen by Sequencing"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "94250-8",
        "display": "Borrelia burgdorferi oppA2 gene [Presence] in Specimen by NAA with non-probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "94634-3",
        "display": "Coxiella burnetii DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system": "http://loinc.org",
        "version": "2.80",
        "code": "97206-7",
        "display": "Tropheryma whipplei DNA [Presence] in Specimen by NAA with non-probe detection"
      }
    ]
  }
}