| Package | us.nlm.vsac |
| Resource Type | ValueSet |
| Id | 2.16.840.1.113762.1.4.1146.2168 |
| FHIR Version | R4 |
| Source | http://fhir.org/packages/us.nlm.vsac/https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.2168/expansion |
| URL | http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.2168 |
| Version | 20240620 |
| Status | active |
| Date | 2024-06-20T01:22:57-04:00 |
| Name | VirusesCausingEncephalitisTestsForVirusesCausingEncephalitisInUnspecifiedSpecimenByCultureAndIdentification |
| Title | Viruses [Causing Encephalitis] (Tests for Viruses Causing Encephalitis in Unspecified Specimen by Culture and Identification) |
| Realm | us |
| Authority | hl7 |
| Purpose | (Clinical Focus: This set of values contains codes for laboratory test names associated with Encephalitis-causing viruses by culture and identification tests),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: Encephalitis-causing viruses by culture and identification tests),(Exclusion Criteria: none) |
No resources found
| CodeSystem | |
| loinc.org | LOINC Code System |
No narrative content found in resource
FHIR{
"resourceType": "ValueSet",
"id": "2.16.840.1.113762.1.4.1146.2168",
"meta": {
"versionId": "13",
"lastUpdated": "2024-06-20T01:22:57.000-04:00",
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},
"extension": [
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"valueContactDetail": {
"name": "CSTE Author"
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},
{
"url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
"valueString": "Encephalitis,Trigger"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
"valueDate": "2024-06-20"
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{
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"valueDate": "2024-06-20"
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],
"url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.2168",
"identifier": [
{
"system": "urn:ietf:rfc:3986",
"value": "urn:oid:2.16.840.1.113762.1.4.1146.2168"
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],
"version": "20240620",
"name": "VirusesCausingEncephalitisTestsForVirusesCausingEncephalitisInUnspecifiedSpecimenByCultureAndIdentification",
"title": "Viruses [Causing Encephalitis] (Tests for Viruses Causing Encephalitis in Unspecified Specimen by Culture and Identification)",
"status": "active",
"date": "2024-06-20T01:22:57-04:00",
"publisher": "CSTE Steward",
"jurisdiction": [
{
"coding": [
{
"system": "urn:iso:std:iso:3166",
"code": "US"
}
]
}
],
"purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with Encephalitis-causing viruses by culture and identification tests),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: Encephalitis-causing viruses by culture and identification tests),(Exclusion Criteria: none)",
"compose": {
"include": [
{
"system": "http://loinc.org",
"concept": [
{
"code": "10860-5",
"display": "Varicella zoster virus [Presence] in Specimen by Organism specific culture"
},
{
"code": "13921-2",
"display": "Mumps virus [Presence] in Specimen by Organism specific culture"
},
{
"code": "14084-8",
"display": "Herpes simplex virus 1 [Presence] in Isolate by Immunofluorescence"
},
{
"code": "14085-5",
"display": "Herpes simplex virus 2 [Presence] in Isolate by Immunofluorescence"
},
{
"code": "16291-7",
"display": "Herpes simplex virus 1 [Presence] in Specimen by Organism specific culture"
},
{
"code": "20445-3",
"display": "Herpes virus identified in Specimen by Organism specific culture"
},
{
"code": "22826-2",
"display": "Influenza virus A identified in Specimen by Bioassay"
},
{
"code": "35422-5",
"display": "Herpes simplex virus identified in Body fluid by Organism specific culture"
},
{
"code": "35431-6",
"display": "Herpes simplex virus identified in Tissue by Organism specific culture"
},
{
"code": "38382-8",
"display": "Influenza virus B [Presence] in Specimen by Organism specific culture"
},
{
"code": "40436-8",
"display": "Parainfluenza virus identified in Specimen by Organism specific culture"
},
{
"code": "43693-1",
"display": "Varicella zoster virus identified in Skin by Shell vial culture"
},
{
"code": "43695-6",
"display": "Herpes virus identified in Specimen by Shell vial culture"
},
{
"code": "43697-2",
"display": "Herpes simplex virus identified in Specimen by Shell vial culture"
},
{
"code": "43698-0",
"display": "Enterovirus identified in Specimen by Shell vial culture"
},
{
"code": "43701-2",
"display": "Cytomegalovirus [Presence] in Specimen by Shell vial culture"
},
{
"code": "43704-6",
"display": "Cytomegalovirus [Presence] in Body fluid by Shell vial culture"
},
{
"code": "43707-9",
"display": "Cytomegalovirus [Presence] in Tissue by Shell vial culture"
},
{
"code": "44484-4",
"display": "Herpes simplex virus 2 [Presence] in Specimen by Organism specific culture"
},
{
"code": "48310-7",
"display": "Influenza virus A [Presence] in Specimen by Organism specific culture"
},
{
"code": "49520-0",
"display": "Influenza virus A H1 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code": "49522-6",
"display": "Influenza virus A H3 Ag [Presence] in Isolate by Immunofluorescence"
},
{
"code": "49523-4",
"display": "Influenza virus A H3 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code": "49526-7",
"display": "Influenza virus A H5 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code": "49527-5",
"display": "Influenza virus A H7 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code": "49529-1",
"display": "Influenza virus A Ag [Presence] in Isolate by Immunofluorescence"
},
{
"code": "49531-7",
"display": "Influenza virus A RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code": "49532-5",
"display": "Influenza virus A hemagglutinin type RNA [Identifier] in Isolate by Sequencing"
},
{
"code": "49538-2",
"display": "Influenza virus identified in Specimen by Shell vial culture"
},
{
"code": "50697-2",
"display": "Influenza virus A Ag [Identifier] in Isolate"
},
{
"code": "50701-2",
"display": "Influenza virus A H1 Ag [Presence] in Isolate by Immunofluorescence"
},
{
"code": "50702-0",
"display": "Influenza virus A matrix protein RNA [Presence] in Isolate by Sequencing"
},
{
"code": "50704-6",
"display": "Influenza virus A nucleoprotein RNA [Presence] in Isolate by Sequencing"
},
{
"code": "50705-3",
"display": "Influenza virus A non-structural protein RNA [Presence] in Isolate by Sequencing"
},
{
"code": "50706-1",
"display": "Influenza virus A polymerase A RNA [Presence] in Isolate by Sequencing"
},
{
"code": "50707-9",
"display": "Influenza virus A polymerase B1 cDNA [Presence] in Isolate by Sequencing"
},
{
"code": "50708-7",
"display": "Influenza virus A polymerase B2 RNA [Presence] in Isolate by Sequencing"
},
{
"code": "50711-1",
"display": "Influenza virus A polymerase RNA [Identifier] in Isolate by Sequencing"
},
{
"code": "55095-4",
"display": "Adenovirus [Presence] in Specimen by Organism specific culture"
},
{
"code": "55097-0",
"display": "Parainfluenza virus 1 [Presence] in Specimen by Organism specific culture"
},
{
"code": "55098-8",
"display": "Parainfluenza virus 2 [Presence] in Specimen by Organism specific culture"
},
{
"code": "55099-6",
"display": "Parainfluenza virus 3 [Presence] in Specimen by Organism specific culture"
},
{
"code": "55133-3",
"display": "Influenza virus A hemagglutinin cDNA [Identifier] in Isolate by NAA with probe detection"
},
{
"code": "55134-1",
"display": "Influenza virus A neuraminidase RNA [Identifier] in Isolate by NAA with probe detection"
},
{
"code": "5836-2",
"display": "Cytomegalovirus [Presence] in Tissue by Organism specific culture"
},
{
"code": "5838-8",
"display": "Cytomegalovirus [Presence] in Specimen by Organism specific culture"
},
{
"code": "5840-4",
"display": "Enterovirus identified in Isolate by Immunofluorescence"
},
{
"code": "5841-2",
"display": "Enterovirus identified in Isolate by Neutralization test"
},
{
"code": "5843-8",
"display": "Enterovirus identified in Specimen by Organism specific culture"
},
{
"code": "5857-8",
"display": "Herpes simplex virus identified in Isolate by Immunofluorescence"
},
{
"code": "5859-4",
"display": "Herpes simplex virus identified in Specimen by Organism specific culture"
},
{
"code": "59424-2",
"display": "Influenza virus A hemagglutinin type RNA [Identifier] in Isolate by NAA with probe detection"
},
{
"code": "60259-9",
"display": "Adenovirus DNA [Presence] in Isolate by NAA with probe detection"
},
{
"code": "60263-1",
"display": "Enterovirus RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code": "60270-6",
"display": "Rabies virus RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code": "60429-8",
"display": "Enterovirus 71 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code": "60530-3",
"display": "Influenza virus A H9 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code": "62454-4",
"display": "Herpes simplex virus and Varicella zoster virus identified in Specimen by Organism specific culture"
},
{
"code": "6431-1",
"display": "HIV identified in Specimen by Organism specific culture"
},
{
"code": "6536-7",
"display": "Rabies virus identified in Tissue by Organism specific culture"
},
{
"code": "6539-1",
"display": "Rabies virus identified in Specimen by Organism specific culture"
},
{
"code": "6548-2",
"display": "Rubella virus identified in Serum by Organism specific culture"
},
{
"code": "6604-3",
"display": "Influenza virus identified in Specimen by Organism specific culture"
},
{
"code": "67805-2",
"display": "Cytomegalovirus Ag [Presence] in Isolate by Immunofluorescence"
},
{
"code": "67806-0",
"display": "Measles virus Ag [Presence] in Isolate by Immunofluorescence"
},
{
"code": "67807-8",
"display": "Mumps virus Ag [Presence] in Isolate by Immunofluorescence"
},
{
"code": "67812-8",
"display": "Varicella zoster virus Ag [Presence] in Isolate by Immunofluorescence"
},
{
"code": "76626-1",
"display": "Measles virus [Presence] in Specimen by Organism specific culture"
},
{
"code": "76632-9",
"display": "Enterovirus sp [Presence] in Isolate by Immunofluorescence"
},
{
"code": "82746-9",
"display": "Varicella zoster virus strain [Type] in Isolate"
},
{
"code": "83325-1",
"display": "HIV 1 RNA genotype in Isolate"
},
{
"code": "83326-9",
"display": "HIV 1 RNA genotype and phenotype in Isolate"
},
{
"code": "83327-7",
"display": "HIV 1 RNA phenotype in Isolate"
},
{
"code": "85532-0",
"display": "Influenza virus A whole genome [Nucleotide sequence] in Isolate by Sequencing"
},
{
"code": "85802-7",
"display": "Influenza virus A H1 Ag [Titer] in Isolate by Hemagglutination inhibition"
},
{
"code": "85803-5",
"display": "Influenza virus A H3 Ag [Titer] in Isolate by Hemagglutination inhibition"
},
{
"code": "85804-3",
"display": "Influenza virus A H5 Ag [Titer] in Isolate by Hemagglutination inhibition"
},
{
"code": "85805-0",
"display": "Influenza virus A H7 Ag [Titer] in Isolate by Hemagglutination inhibition"
},
{
"code": "86322-5",
"display": "Enterovirus [Presence] in Specimen by Organism specific culture"
},
{
"code": "87714-2",
"display": "Influenza virus A M gene [Nucleotide sequence] in Isolate by Sequencing"
},
{
"code": "87715-9",
"display": "Influenza virus A HA gene [Nucleotide sequence] in Isolate by Sequencing"
},
{
"code": "87716-7",
"display": "Influenza virus A NA gene [Nucleotide sequence] in Isolate by Sequencing"
},
{
"code": "91773-2",
"display": "Herpes simplex virus identified in Aspirate by Organism specific culture"
},
{
"code": "93759-9",
"display": "Influenza virus A PB2 gene [Nucleotide sequence] in Isolate by Sequencing"
},
{
"code": "93760-7",
"display": "Influenza virus A PB1 gene [Nucleotide sequence] in Isolate by Sequencing"
},
{
"code": "93761-5",
"display": "Influenza virus A PA gene [Nucleotide sequence] in Isolate by Sequencing"
},
{
"code": "93762-3",
"display": "Influenza virus A NP gene [Nucleotide sequence] in Isolate by Sequencing"
},
{
"code": "93763-1",
"display": "Influenza virus A NS1 gene [Nucleotide sequence] in Isolate by Sequencing"
},
{
"code": "97732-2",
"display": "Enterovirus VP1 gene [Nucleotide sequence] in Isolate by Sequencing"
},
{
"code": "9782-4",
"display": "Adenovirus sp identified in Specimen by Organism specific culture"
}
]
}
]
},
"expansion": {
"identifier": "urn:uuid:62e25b06-6546-411d-ad4b-6c3b0f0c7c66",
"timestamp": "2025-05-23T18:39:07-04:00",
"total": 90,
"contains": [
{
"system": "http://loinc.org",
"version": "2.80",
"code": "10860-5",
"display": "Varicella zoster virus [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "13921-2",
"display": "Mumps virus [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14084-8",
"display": "Herpes simplex virus 1 [Presence] in Isolate by Immunofluorescence"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "14085-5",
"display": "Herpes simplex virus 2 [Presence] in Isolate by Immunofluorescence"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "16291-7",
"display": "Herpes simplex virus 1 [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "20445-3",
"display": "Herpes virus identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "22826-2",
"display": "Influenza virus A identified in Specimen by Bioassay"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "35422-5",
"display": "Herpes simplex virus identified in Body fluid by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "35431-6",
"display": "Herpes simplex virus identified in Tissue by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "38382-8",
"display": "Influenza virus B [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "40436-8",
"display": "Parainfluenza virus identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "43693-1",
"display": "Varicella zoster virus identified in Skin by Shell vial culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "43695-6",
"display": "Herpes virus identified in Specimen by Shell vial culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "43697-2",
"display": "Herpes simplex virus identified in Specimen by Shell vial culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "43698-0",
"display": "Enterovirus identified in Specimen by Shell vial culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "43701-2",
"display": "Cytomegalovirus [Presence] in Specimen by Shell vial culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "43704-6",
"display": "Cytomegalovirus [Presence] in Body fluid by Shell vial culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "43707-9",
"display": "Cytomegalovirus [Presence] in Tissue by Shell vial culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "44484-4",
"display": "Herpes simplex virus 2 [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "48310-7",
"display": "Influenza virus A [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "49520-0",
"display": "Influenza virus A H1 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "49522-6",
"display": "Influenza virus A H3 Ag [Presence] in Isolate by Immunofluorescence"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "49523-4",
"display": "Influenza virus A H3 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "49526-7",
"display": "Influenza virus A H5 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "49527-5",
"display": "Influenza virus A H7 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "49529-1",
"display": "Influenza virus A Ag [Presence] in Isolate by Immunofluorescence"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "49531-7",
"display": "Influenza virus A RNA [Presence] in Isolate by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "49532-5",
"display": "Influenza virus A hemagglutinin type RNA [Identifier] in Isolate by Sequencing"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "49538-2",
"display": "Influenza virus identified in Specimen by Shell vial culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "50697-2",
"display": "Influenza virus A Ag [Identifier] in Isolate"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "50701-2",
"display": "Influenza virus A H1 Ag [Presence] in Isolate by Immunofluorescence"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "50702-0",
"display": "Influenza virus A matrix protein RNA [Presence] in Isolate by Sequencing"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "50704-6",
"display": "Influenza virus A nucleoprotein RNA [Presence] in Isolate by Sequencing"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "50705-3",
"display": "Influenza virus A non-structural protein RNA [Presence] in Isolate by Sequencing"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "50706-1",
"display": "Influenza virus A polymerase A RNA [Presence] in Isolate by Sequencing"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "50707-9",
"display": "Influenza virus A polymerase B1 cDNA [Presence] in Isolate by Sequencing"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "50708-7",
"display": "Influenza virus A polymerase B2 RNA [Presence] in Isolate by Sequencing"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "50711-1",
"display": "Influenza virus A polymerase RNA [Identifier] in Isolate by Sequencing"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "55095-4",
"display": "Adenovirus [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "55097-0",
"display": "Parainfluenza virus 1 [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "55098-8",
"display": "Parainfluenza virus 2 [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "55099-6",
"display": "Parainfluenza virus 3 [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "55133-3",
"display": "Influenza virus A hemagglutinin cDNA [Identifier] in Isolate by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "55134-1",
"display": "Influenza virus A neuraminidase RNA [Identifier] in Isolate by NAA with probe detection"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "5836-2",
"display": "Cytomegalovirus [Presence] in Tissue by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "5838-8",
"display": "Cytomegalovirus [Presence] in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "5840-4",
"display": "Enterovirus identified in Isolate by Immunofluorescence"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "5841-2",
"display": "Enterovirus identified in Isolate by Neutralization test"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "5843-8",
"display": "Enterovirus identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "5857-8",
"display": "Herpes simplex virus identified in Isolate by Immunofluorescence"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "5859-4",
"display": "Herpes simplex virus identified in Specimen by Organism specific culture"
},
{
"system": "http://loinc.org",
"version": "2.80",
"code": "59424-2",
"display": "Influenza virus A hemagglutinin type RNA [Identifier] in Isolate by NAA with probe detection"
},
{
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