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FHIR IG Statistics: ValueSet/2.16.840.1.114222.4.11.7948

Packageus.cdc.phinvads
Resource TypeValueSet
Id2.16.840.1.114222.4.11.7948
FHIR VersionR4
Sourcehttp://fhir.org/packages/us.cdc.phinvads
URLhttp://phinvads.cdc.gov/fhir/ValueSet/2.16.840.1.114222.4.11.7948
Version9
Statusactive
Date2021-01-14T00:09:00+11:00
NamePHVS_LabTestType_COVID-19
TitleLab Test Type (COVID-19)
Realmus
DescriptionEpidemiologic interpretation of the type of test(s) performed for this case. Used in COVID-19 MMG.

Resources that use this resource

No resources found


Resources that this resource uses

CodeSystem
loinc.orgLOINC Code System

Narrative

No narrative content found in resource


Source

{
  "resourceType": "ValueSet",
  "id": "2.16.840.1.114222.4.11.7948",
  "meta": {
    "source": "https://phinvads.cdc.gov/vads/ViewValueSet.action?oid=2.16.840.1.114222.4.11.7948"
  },
  "url": "http://phinvads.cdc.gov/fhir/ValueSet/2.16.840.1.114222.4.11.7948",
  "version": "9",
  "name": "PHVS_LabTestType_COVID-19",
  "title": "Lab Test Type (COVID-19)",
  "status": "active",
  "date": "2021-01-14T00:09:00+11:00",
  "description": "Epidemiologic interpretation of the type of test(s) performed for this case. Used in COVID-19 MMG.",
  "compose": {
    "include": [
      {
        "system": "http://loinc.org",
        "version": "2.72",
        "concept": [
          {
            "code": "95423-0",
            "display": "Influenza virus A + B and SARS-CoV-2 (COVID-19) identified in Respiratory specimen by NAA with probe detection"
          },
          {
            "code": "95125-1",
            "display": "SARS coronavirus 2 IgA+IgM [Presence] in Serum or Plasma by Immunoassay"
          },
          {
            "code": "95542-7",
            "display": "SARS-CoV-2 (COVID-19) IgG+IgM Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay"
          },
          {
            "code": "95209-3",
            "display": "SARS coronavirus+SARS coronavirus 2 Ag [Presence] in Respiratory specimen by Rapid immunoassay"
          },
          {
            "code": "95825-6",
            "display": "SARS-CoV-2 (COVID-19) Ab [Presence] in DBS by Immunoassay"
          },
          {
            "code": "98069-8",
            "display": "SARS-CoV-2 (COVID-19) Ab [Presence] in Saliva (oral fluid) by Rapid immunoassay"
          },
          {
            "code": "94762-2",
            "display": "SARS coronavirus 2 Ab [Presence] in Serum or Plasma by Immunoassay"
          },
          {
            "code": "94661-6",
            "display": "SARS coronavirus 2 Ab [Interpretation] in Serum or Plasma"
          },
          {
            "code": "94558-4",
            "display": "SARS coronavirus 2 Ag [Presence] in Respiratory specimen by Rapid immunoassay"
          },
          {
            "code": "96119-3",
            "display": "SARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Immunoassay"
          },
          {
            "code": "97097-0",
            "display": "SARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Rapid immunoassay"
          },
          {
            "code": "96763-8",
            "display": "SARS-CoV-2 (COVID-19) E gene [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code": "94758-0",
            "display": "SARS coronavirus 2 E gene [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code": "94765-5",
            "display": "SARS coronavirus 2 E gene [Presence] in Serum or Plasma by NAA with probe detection"
          },
          {
            "code": "94315-9",
            "display": "SARS coronavirus 2 E gene [Presence] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code": "94764-8",
            "display": "SARS coronavirus 2 whole genome [Nucleotide sequence] in Isolate by Sequencing"
          },
          {
            "code": "95971-8",
            "display": "SARS CoV-2 stimulated gamma interferon [Presence] in Blood"
          },
          {
            "code": "99772-6",
            "display": "SARS-CoV-2 stimulated gamma interferon [Interpretation] in Blood Qualitative"
          },
          {
            "code": "94562-6",
            "display": "SARS coronavirus 2 IgA Ab [Presence] in Serum or Plasma by Immunoassay"
          },
          {
            "code": "94768-9",
            "display": "SARS coronavirus 2 IgA Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay"
          },
          {
            "code": "94761-4",
            "display": "SARS coronavirus 2 IgG Ab [Presence] in DBS by Immunoassay"
          },
          {
            "code": "94563-4",
            "display": "SARS coronavirus 2 IgG Ab [Presence] in Serum or Plasma by Immunoassay"
          },
          {
            "code": "94507-1",
            "display": "SARS coronavirus 2 IgG Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay"
          },
          {
            "code": "94547-7",
            "display": "SARS coronavirus 2 IgG+IgM Ab [Presence] in Serum or Plasma by Immunoassay"
          },
          {
            "code": "95416-4",
            "display": "SARS-CoV-2 (COVID-19) IgM Ab [Presence] in DBS by Immunoassay"
          },
          {
            "code": "94564-2",
            "display": "SARS coronavirus 2 IgM Ab [Presence] in Serum or Plasma by Immunoassay"
          },
          {
            "code": "94508-9",
            "display": "SARS coronavirus 2 IgM Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay"
          },
          {
            "code": "96895-8",
            "display": "SARS-CoV-2 (COVID-19) lineage [Identifier] in Specimen by Molecular genetics method"
          },
          {
            "code": "96957-6",
            "display": "SARS-CoV-2 (COVID-19) M gene [Presence] in Upper respiratory specimen by NAA with probe detection"
          },
          {
            "code": "96986-5",
            "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with non-probe detection"
          },
          {
            "code": "95409-9",
            "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with probe detection"
          },
          {
            "code": "94760-6",
            "display": "SARS coronavirus 2 N gene [Presence] in Nasopharynx by NAA with probe detection"
          },
          {
            "code": "94756-4",
            "display": "SARS coronavirus 2 N gene [Presence] in Respiratory specimen by Nucleic acid amplification using CDC primer-probe set N1"
          },
          {
            "code": "94757-2",
            "display": "SARS coronavirus 2 N gene [Presence] in Respiratory specimen by Nucleic acid amplification using CDC primer-probe set N2"
          },
          {
            "code": "94533-7",
            "display": "SARS coronavirus 2 N gene [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code": "96448-6",
            "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N1"
          },
          {
            "code": "96958-4",
            "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N2"
          },
          {
            "code": "95425-5",
            "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by NAA with probe detection"
          },
          {
            "code": "94766-3",
            "display": "SARS coronavirus 2 N gene [Presence] in Serum or Plasma by NAA with probe detection"
          },
          {
            "code": "94307-6",
            "display": "SARS coronavirus 2 N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N1"
          },
          {
            "code": "94308-4",
            "display": "SARS coronavirus 2 N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N2"
          },
          {
            "code": "94316-7",
            "display": "SARS coronavirus 2 N gene [Presence] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code": "99596-9",
            "display": "SARS-CoV-2 (COVID-19) N protein IgG Ab [Presence] in Serum or Plasma by Immunoassay"
          },
          {
            "code": "95411-5",
            "display": "SARS-CoV-2 (COVID-19) neutralizing antibody [Presence] in Serum by pVNT"
          },
          {
            "code": "95410-7",
            "display": "SARS-CoV-2 (COVID-19) neutralizing antibody [Titer] in Serum by pVNT"
          },
          {
            "code": "97098-8",
            "display": "SARS-CoV-2 (COVID-19) Nsp2 gene [Presence] in Upper respiratory specimen by NAA with probe detection"
          },
          {
            "code": "98132-4",
            "display": "SARS-CoV-2 (COVID-19) ORF1a region [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code": "98494-8",
            "display": "SARS-CoV-2 (COVID-19) ORF1a region [Presence] in Saliva (oral fluid) by NAA with probe detection"
          },
          {
            "code": "94559-2",
            "display": "SARS coronavirus 2 ORF1ab region [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code": "95824-9",
            "display": "SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Saliva (oral fluid) by NAA with probe detection"
          },
          {
            "code": "94639-2",
            "display": "SARS coronavirus 2 ORF1ab region [Presence] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code": "98131-6",
            "display": "SARS-CoV-2 (COVID-19) ORF1b region [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code": "98493-0",
            "display": "SARS-CoV-2 (COVID-19) ORF1b region [Presence] in Saliva (oral fluid) by NAA with probe detection"
          },
          {
            "code": "94534-5",
            "display": "SARS coronavirus 2 RdRp gene [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code": "94314-2",
            "display": "SARS coronavirus 2 RdRp gene [Presence] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code": "96120-1",
            "display": "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Lower respiratory specimen by NAA with probe detection"
          },
          {
            "code": "96091-4",
            "display": "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Saliva (oral fluid) by NAA with probe detection"
          },
          {
            "code": "96123-5",
            "display": "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Upper respiratory specimen by NAA with probe detection"
          },
          {
            "code": "95406-5",
            "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Nose by NAA with probe detection"
          },
          {
            "code": "94565-9",
            "display": "SARS coronavirus 2 RNA [Presence] in Nasopharynx by NAA with non-probe detection"
          },
          {
            "code": "94759-8",
            "display": "SARS coronavirus 2 RNA [Presence] in Nasopharynx by NAA with probe detection"
          },
          {
            "code": "96797-6",
            "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Oropharyngeal wash by NAA with probe detection"
          },
          {
            "code": "95608-6",
            "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with non-probe detection"
          },
          {
            "code": "94500-6",
            "display": "SARS coronavirus 2 RNA [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code": "95424-8",
            "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by Sequencing"
          },
          {
            "code": "94845-5",
            "display": "SARS coronavirus 2 RNA [Presence] in Saliva (oral fluid) by NAA with probe detection"
          },
          {
            "code": "94822-4",
            "display": "SARS coronavirus 2 RNA [Presence] in Saliva (oral fluid) by Sequencing"
          },
          {
            "code": "94660-8",
            "display": "SARS coronavirus 2 RNA [Presence] in Serum or Plasma by NAA with probe detection"
          },
          {
            "code": "94309-2",
            "display": "SARS coronavirus 2 RNA [Presence] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code": "96752-1",
            "display": "SARS-CoV-2 (COVID-19) S gene mutation [Presence] in Specimen by Molecular genetics method"
          },
          {
            "code": "94640-0",
            "display": "SARS coronavirus 2 S gene [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code": "95609-4",
            "display": "SARS-CoV-2 (COVID-19) S gene [Presence] in Respiratory specimen by Sequencing"
          },
          {
            "code": "96765-3",
            "display": "SARS-CoV-2 (COVID-19) S gene [Presence] in Saliva (oral fluid) by NAA with probe detection"
          },
          {
            "code": "94767-1",
            "display": "SARS coronavirus 2 S gene [Presence] in Serum or Plasma by NAA with probe detection"
          },
          {
            "code": "94641-8",
            "display": "SARS coronavirus 2 S gene [Presence] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code": "99597-7",
            "display": "SARS-CoV-2 (COVID-19) S protein IgG Ab [Presence] in Serum or Plasma by Immunoassay"
          },
          {
            "code": "96603-6",
            "display": "SARS-CoV-2 (COVID-19) S protein RBD neutralizing antibody [Presence] in Serum or Plasma by Immunoassay"
          },
          {
            "code": "95970-0",
            "display": "SARS-CoV-2 (COVID-19) specific TCRB gene rearrangements [Presence] in Blood by Sequencing"
          },
          {
            "code": "96741-4",
            "display": "SARS-CoV-2 (COVID-19) variant [Type] in Specimen by Sequencing"
          },
          {
            "code": "94763-0",
            "display": "SARS coronavirus 2 [Presence] in Unspecified specimen by Organism specific culture"
          },
          {
            "code": "94310-0",
            "display": "SARS-like coronavirus N gene [Presence] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code": "96121-9",
            "display": "SARS-related coronavirus E gene [Presence] in Lower respiratory specimen by NAA with probe detection"
          },
          {
            "code": "95823-1",
            "display": "SARS-related coronavirus E gene [Presence] in Saliva (oral fluid) by NAA with probe detection"
          },
          {
            "code": "96122-7",
            "display": "SARS-related coronavirus E gene [Presence] in Upper respiratory specimen by NAA with probe detection"
          },
          {
            "code": "94502-2",
            "display": "SARS-related coronavirus RNA [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code": "94647-5",
            "display": "SARS-related coronavirus RNA [Presence] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code": "94532-9",
            "display": "SARS-related coronavirus+MERS coronavirus RNA [Presence] in Respiratory specimen by NAA with probe detection"
          }
        ]
      },
      {
        "system": "urn:oid:2.16.840.1.114222.4.5.232",
        "version": "20211027",
        "concept": [
          {
            "code": "LAB741",
            "display": "Immunoassay test NOS"
          },
          {
            "code": "LAB697",
            "display": "Immunohistochemistry test"
          },
          {
            "code": "LAB739",
            "display": "NAA (PCR) test NOS"
          },
          {
            "code": "LAB608",
            "display": "Other test (specify)"
          },
          {
            "code": "LAB740",
            "display": "Sequencing test NOS"
          },
          {
            "code": "LAB609",
            "display": "Unknown test"
          }
        ]
      }
    ]
  }
}