FHIR IG analytics
Resources that use this resource
Resources that this resource uses
Narrative
No narrative content found in resource
Source1
{
"resourceType": "StructureDefinition",
"id": "profile-molecularbiomarker",
"url": "https://fhir.synapxe.sg/StructureDefinition/profile-molecularbiomarker",
"version": "1.2.3",
"name": "MolecularBiomarker",
"title": "Molecular Biomarker Profile",
"status": "active",
"publisher": "Synapxe",
"description": "Genomics molecular biomarker profile constrained from Observation.",
"fhirVersion": "5.0.0",
"kind": "resource",
"abstract": false,
"type": "Observation",
"baseDefinition": "http://hl7.org/fhir/StructureDefinition/Observation",
"derivation": "constraint",
"differential": {
"element": [
{
"id": "Observation.id",
"path": "Observation.id",
"max": "0"
},
{
"id": "Observation.identifier",
"path": "Observation.identifier",
"max": "0"
},
{
"id": "Observation.instantiates[x]",
"path": "Observation.instantiates[x]",
"max": "0"
},
{
"id": "Observation.basedOn",
"path": "Observation.basedOn",
"max": "0"
},
{
"id": "Observation.triggeredBy",
"path": "Observation.triggeredBy",
"max": "0"
},
{
"id": "Observation.partOf",
"path": "Observation.partOf",
"max": "0"
},
{
"id": "Observation.category",
"path": "Observation.category",
"slicing": {
"discriminator": [
{
"type": "value",
"path": "coding.code"
}
],
"rules": "closed"
},
"min": 2,
"max": "2"
},
{
"id": "Observation.category:labCategory",
"path": "Observation.category",
"sliceName": "labCategory",
"min": 1,
"max": "1",
"type": [
{
"code": "CodeableConcept",
"profile": [
"https://fhir.synapxe.sg/StructureDefinition/profile-codeableconcept"
]
}
],
"binding": {
"strength": "required",
"valueSet": "https://fhir.synapxe.sg/ValueSet/genomics-observation-category"
}
},
{
"id": "Observation.category:labCategory.coding",
"path": "Observation.category.coding",
"max": "1"
},
{
"id": "Observation.category:labCategory.coding.system",
"path": "Observation.category.coding.system",
"patternUri": "http://terminology.hl7.org/CodeSystem/observation-category"
},
{
"id": "Observation.category:labCategory.coding.code",
"path": "Observation.category.coding.code",
"fixedCode": "laboratory"
},
{
"id": "Observation.category:mbCategory",
"path": "Observation.category",
"sliceName": "mbCategory",
"min": 1,
"max": "1",
"type": [
{
"code": "CodeableConcept",
"profile": [
"https://fhir.synapxe.sg/StructureDefinition/profile-codeableconcept"
]
}
],
"binding": {
"strength": "required",
"valueSet": "https://fhir.synapxe.sg/ValueSet/genomics-observation-category"
}
},
{
"id": "Observation.category:mbCategory.coding",
"path": "Observation.category.coding",
"max": "1"
},
{
"id": "Observation.category:mbCategory.coding.system",
"path": "Observation.category.coding.system",
"patternUri": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes-cs"
},
{
"id": "Observation.category:mbCategory.coding.code",
"path": "Observation.category.coding.code",
"fixedCode": "biomarker-category"
},
{
"id": "Observation.code",
"path": "Observation.code",
"type": [
{
"code": "CodeableConcept",
"profile": [
"https://fhir.synapxe.sg/StructureDefinition/profile-codeableconcept"
]
}
]
},
{
"id": "Observation.subject",
"path": "Observation.subject",
"max": "0"
},
{
"id": "Observation.focus",
"path": "Observation.focus",
"max": "0"
},
{
"id": "Observation.encounter",
"path": "Observation.encounter",
"max": "0"
},
{
"id": "Observation.effective[x]",
"path": "Observation.effective[x]",
"max": "0"
},
{
"id": "Observation.issued",
"path": "Observation.issued",
"max": "0"
},
{
"id": "Observation.performer",
"path": "Observation.performer",
"max": "0"
},
{
"id": "Observation.value[x]",
"path": "Observation.value[x]",
"max": "0"
},
{
"id": "Observation.dataAbsentReason",
"path": "Observation.dataAbsentReason",
"max": "0"
},
{
"id": "Observation.interpretation",
"path": "Observation.interpretation",
"max": "0"
},
{
"id": "Observation.note",
"path": "Observation.note",
"max": "0"
},
{
"id": "Observation.bodySite",
"path": "Observation.bodySite",
"max": "0"
},
{
"id": "Observation.bodyStructure",
"path": "Observation.bodyStructure",
"max": "0"
},
{
"id": "Observation.method",
"path": "Observation.method",
"max": "0"
},
{
"id": "Observation.specimen",
"path": "Observation.specimen",
"max": "0"
},
{
"id": "Observation.device",
"path": "Observation.device",
"max": "0"
},
{
"id": "Observation.referenceRange",
"path": "Observation.referenceRange",
"max": "0"
},
{
"id": "Observation.hasMember",
"path": "Observation.hasMember",
"max": "0"
},
{
"id": "Observation.derivedFrom",
"path": "Observation.derivedFrom",
"max": "0"
},
{
"id": "Observation.component",
"path": "Observation.component",
"slicing": {
"discriminator": [
{
"type": "value",
"path": "code.coding.system"
},
{
"type": "value",
"path": "code.coding.code"
}
],
"rules": "closed"
},
"min": 1
},
{
"id": "Observation.component.id",
"path": "Observation.component.id",
"max": "0"
},
{
"id": "Observation.component.extension",
"path": "Observation.component.extension",
"max": "0"
},
{
"id": "Observation.component.modifierExtension",
"path": "Observation.component.modifierExtension",
"max": "0"
},
{
"id": "Observation.component:genomic-source-class",
"path": "Observation.component",
"sliceName": "genomic-source-class"
},
{
"id": "Observation.component:genomic-source-class.code",
"path": "Observation.component.code",
"type": [
{
"code": "CodeableConcept",
"profile": [
"https://fhir.synapxe.sg/StructureDefinition/profile-codeableconcept"
]
}
],
"binding": {
"strength": "required",
"valueSet": "https://fhir.synapxe.sg/ValueSet/genomics-component"
}
},
{
"id": "Observation.component:genomic-source-class.code.coding",
"path": "Observation.component.code.coding",
"max": "1"
},
{
"id": "Observation.component:genomic-source-class.code.coding.system",
"path": "Observation.component.code.coding.system",
"patternUri": "https://fhir.synapxe.sg/CodeSystem/genomics-component"
},
{
"id": "Observation.component:genomic-source-class.code.coding.code",
"path": "Observation.component.code.coding.code",
"patternCode": "genomic-source-class"
},
{
"id": "Observation.component:genomic-source-class.value[x]",
"path": "Observation.component.value[x]",
"min": 1,
"type": [
{
"code": "CodeableConcept",
"profile": [
"https://fhir.synapxe.sg/StructureDefinition/profile-codeableconcept"
]
}
]
},
{
"id": "Observation.component:genomic-source-class.dataAbsentReason",
"path": "Observation.component.dataAbsentReason",
"max": "0"
},
{
"id": "Observation.component:genomic-source-class.interpretation",
"path": "Observation.component.interpretation",
"max": "0"
},
{
"id": "Observation.component:genomic-source-class.referenceRange",
"path": "Observation.component.referenceRange",
"max": "0"
},
{
"id": "Observation.component:specimen-condition",
"path": "Observation.component",
"sliceName": "specimen-condition"
},
{
"id": "Observation.component:specimen-condition.code",
"path": "Observation.component.code",
"type": [
{
"code": "CodeableConcept",
"profile": [
"https://fhir.synapxe.sg/StructureDefinition/profile-codeableconcept"
]
}
]
},
{
"id": "Observation.component:specimen-condition.code.coding",
"path": "Observation.component.code.coding",
"max": "1"
},
{
"id": "Observation.component:specimen-condition.code.coding.system",
"path": "Observation.component.code.coding.system",
"patternUri": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes-cs"
},
{
"id": "Observation.component:specimen-condition.code.coding.code",
"path": "Observation.component.code.coding.code",
"patternCode": "specimen-condition"
},
{
"id": "Observation.component:specimen-condition.value[x]",
"path": "Observation.component.value[x]",
"min": 1,
"type": [
{
"code": "string"
}
]
},
{
"id": "Observation.component:specimen-condition.dataAbsentReason",
"path": "Observation.component.dataAbsentReason",
"max": "0"
},
{
"id": "Observation.component:specimen-condition.interpretation",
"path": "Observation.component.interpretation",
"max": "0"
},
{
"id": "Observation.component:specimen-condition.referenceRange",
"path": "Observation.component.referenceRange",
"max": "0"
},
{
"id": "Observation.component:gene-studied",
"path": "Observation.component",
"sliceName": "gene-studied"
},
{
"id": "Observation.component:gene-studied.code",
"path": "Observation.component.code",
"type": [
{
"code": "CodeableConcept",
"profile": [
"https://fhir.synapxe.sg/StructureDefinition/profile-codeableconcept"
]
}
],
"binding": {
"strength": "required",
"valueSet": "https://fhir.synapxe.sg/ValueSet/genomics-component"
}
},
{
"id": "Observation.component:gene-studied.code.coding",
"path": "Observation.component.code.coding",
"max": "1"
},
{
"id": "Observation.component:gene-studied.code.coding.system",
"path": "Observation.component.code.coding.system",
"patternUri": "http://loinc.org"
},
{
"id": "Observation.component:gene-studied.code.coding.code",
"path": "Observation.component.code.coding.code",
"patternCode": "48018-6"
},
{
"id": "Observation.component:gene-studied.value[x]",
"path": "Observation.component.value[x]",
"min": 1,
"type": [
{
"code": "CodeableConcept",
"profile": [
"https://fhir.synapxe.sg/StructureDefinition/profile-codeableconcept"
]
}
]
},
{
"id": "Observation.component:gene-studied.dataAbsentReason",
"path": "Observation.component.dataAbsentReason",
"max": "0"
},
{
"id": "Observation.component:gene-studied.interpretation",
"path": "Observation.component.interpretation",
"max": "0"
},
{
"id": "Observation.component:gene-studied.referenceRange",
"path": "Observation.component.referenceRange",
"max": "0"
}
]
}
}
FHIR
FHIRsmith