FHIR IG analytics| Package | pc.ig |
| Resource Type | StructureDefinition |
| Id | StructureDefinition-pc-variant-annotation-lm.json |
| FHIR Version | R4 |
| Source | https://build.fhir.org/ig/hl7-eu/protect-child/StructureDefinition-pc-variant-annotation-lm.html |
| URL | https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-variant-annotation-lm |
| Version | 0.1.0-ci-build |
| Status | draft |
| Date | 2026-02-09T17:40:58+00:00 |
| Name | PcVariantAnnotation |
| Title | VariantAnnotation logical model |
| Description | Logical model representing the PROTECT-CHILD data model entity `variant_annotation`. |
| Type | https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-variant-annotation-lm |
| Kind | logical |
No resources found
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Note: links and images are rebased to the (stated) source
Generated Narrative: StructureDefinition pc-variant-annotation-lm
| Name | Flags | Card. | Type | Description & Constraints |
|---|---|---|---|---|
  pc-variant-annotation-lm | 0..* | Base | VariantAnnotation logical model | |
  variantAnnotationId | 1..1 | string | Variant annotation id | |
| variantOccurrenceId | 0..1 | string | Variant occurrence id | |
| annotationDatabase | 0..1 | string | Annotation database | |
| variantOrigin | 0..1 | string | Variant origin | |
| variantPathogeny | 0..1 | string | Variant pathogeny | |
| variantClassLevel | 0..1 | string | Variant class level | |
| variantTierLevel | 0..1 | string | Variant tier level | |
| alleleFrequency | 0..1 | decimal | Allele frequency | |
 medication | 0..1 | string | Medication | |
| Documentation for this format | ||||
FHIR
FHIRsmith{
"resourceType": "StructureDefinition",
"id": "pc-variant-annotation-lm",
"text": {
"status": "extensions",
"div": "<!-- snip (see above) -->"
},
"url": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-variant-annotation-lm",
"version": "0.1.0-ci-build",
"name": "PcVariantAnnotation",
"title": "VariantAnnotation logical model",
"status": "draft",
"date": "2026-02-09T17:40:58+00:00",
"publisher": "Protect Child",
"contact": [
{
"name": "Protect Child",
"telecom": [
{
"system": "url",
"value": "https://protect-child.eu/"
}
]
}
],
"description": "Logical model representing the PROTECT-CHILD data model entity `variant_annotation`.",
"fhirVersion": "4.0.1",
"kind": "logical",
"abstract": false,
"type": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-variant-annotation-lm",
"baseDefinition": "http://hl7.org/fhir/StructureDefinition/Base",
"derivation": "specialization",
"snapshot": {
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/snapshot-base-version",
"valueString": "4.0.1"
}
],
"element": [
{
"id": "pc-variant-annotation-lm",
"path": "pc-variant-annotation-lm",
"short": "VariantAnnotation logical model",
"definition": "Logical model representing the PROTECT-CHILD data model entity `variant_annotation`.",
"min": 0,
"max": "*",
"base": {
"path": "Base",
"min": 0,
"max": "*"
},
"isModifier": false
},
{
"id": "pc-variant-annotation-lm.variantAnnotationId",
"path": "pc-variant-annotation-lm.variantAnnotationId",
"short": "Variant annotation id",
"definition": "Field `variant_annotation_id` from the PROTECT-CHILD data model.",
"min": 1,
"max": "1",
"base": {
"path": "pc-variant-annotation-lm.variantAnnotationId",
"min": 1,
"max": "1"
},
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.variantOccurrenceId",
"path": "pc-variant-annotation-lm.variantOccurrenceId",
"short": "Variant occurrence id",
"definition": "Field `variant_occurrence_id` from the PROTECT-CHILD data model. Foreign key to `variant_occurrence`.",
"min": 0,
"max": "1",
"base": {
"path": "pc-variant-annotation-lm.variantOccurrenceId",
"min": 0,
"max": "1"
},
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.annotationDatabase",
"path": "pc-variant-annotation-lm.annotationDatabase",
"short": "Annotation database",
"definition": "Field `annotation_database` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-variant-annotation-lm.annotationDatabase",
"min": 0,
"max": "1"
},
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.variantOrigin",
"path": "pc-variant-annotation-lm.variantOrigin",
"short": "Variant origin",
"definition": "Field `variant_origin` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-variant-annotation-lm.variantOrigin",
"min": 0,
"max": "1"
},
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.variantPathogeny",
"path": "pc-variant-annotation-lm.variantPathogeny",
"short": "Variant pathogeny",
"definition": "Field `variant_pathogeny` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-variant-annotation-lm.variantPathogeny",
"min": 0,
"max": "1"
},
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.variantClassLevel",
"path": "pc-variant-annotation-lm.variantClassLevel",
"short": "Variant class level",
"definition": "Field `variant_class_level` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-variant-annotation-lm.variantClassLevel",
"min": 0,
"max": "1"
},
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.variantTierLevel",
"path": "pc-variant-annotation-lm.variantTierLevel",
"short": "Variant tier level",
"definition": "Field `variant_tier_level` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-variant-annotation-lm.variantTierLevel",
"min": 0,
"max": "1"
},
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.alleleFrequency",
"path": "pc-variant-annotation-lm.alleleFrequency",
"short": "Allele frequency",
"definition": "Field `allele_frequency` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-variant-annotation-lm.alleleFrequency",
"min": 0,
"max": "1"
},
"type": [
{
"code": "decimal"
}
]
},
{
"id": "pc-variant-annotation-lm.medication",
"path": "pc-variant-annotation-lm.medication",
"short": "Medication",
"definition": "Field `medication` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-variant-annotation-lm.medication",
"min": 0,
"max": "1"
},
"type": [
{
"code": "string"
}
]
}
]
},
"differential": {
"element": [
{
"id": "pc-variant-annotation-lm",
"path": "pc-variant-annotation-lm",
"short": "VariantAnnotation logical model",
"definition": "Logical model representing the PROTECT-CHILD data model entity `variant_annotation`."
},
{
"id": "pc-variant-annotation-lm.variantAnnotationId",
"path": "pc-variant-annotation-lm.variantAnnotationId",
"short": "Variant annotation id",
"definition": "Field `variant_annotation_id` from the PROTECT-CHILD data model.",
"min": 1,
"max": "1",
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.variantOccurrenceId",
"path": "pc-variant-annotation-lm.variantOccurrenceId",
"short": "Variant occurrence id",
"definition": "Field `variant_occurrence_id` from the PROTECT-CHILD data model. Foreign key to `variant_occurrence`.",
"min": 0,
"max": "1",
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.annotationDatabase",
"path": "pc-variant-annotation-lm.annotationDatabase",
"short": "Annotation database",
"definition": "Field `annotation_database` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.variantOrigin",
"path": "pc-variant-annotation-lm.variantOrigin",
"short": "Variant origin",
"definition": "Field `variant_origin` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.variantPathogeny",
"path": "pc-variant-annotation-lm.variantPathogeny",
"short": "Variant pathogeny",
"definition": "Field `variant_pathogeny` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.variantClassLevel",
"path": "pc-variant-annotation-lm.variantClassLevel",
"short": "Variant class level",
"definition": "Field `variant_class_level` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.variantTierLevel",
"path": "pc-variant-annotation-lm.variantTierLevel",
"short": "Variant tier level",
"definition": "Field `variant_tier_level` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-variant-annotation-lm.alleleFrequency",
"path": "pc-variant-annotation-lm.alleleFrequency",
"short": "Allele frequency",
"definition": "Field `allele_frequency` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "decimal"
}
]
},
{
"id": "pc-variant-annotation-lm.medication",
"path": "pc-variant-annotation-lm.medication",
"short": "Medication",
"definition": "Field `medication` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "string"
}
]
}
]
}
}