FHIR IG analytics| Package | pc.ig |
| Resource Type | StructureDefinition |
| Id | StructureDefinition-pc-microbiology-lm.json |
| FHIR Version | R4 |
| Source | https://build.fhir.org/ig/hl7-eu/protect-child/StructureDefinition-pc-microbiology-lm.html |
| URL | https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-microbiology-lm |
| Version | 0.1.0-ci-build |
| Status | draft |
| Date | 2026-02-09T17:40:58+00:00 |
| Name | PcMicrobiology |
| Title | Microbiology logical model |
| Description | Logical model representing the PROTECT-CHILD data model entity `microbiology`. |
| Type | https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-microbiology-lm |
| Kind | logical |
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Generated Narrative: StructureDefinition pc-microbiology-lm
FHIR
FHIRsmith
{
"resourceType": "StructureDefinition",
"id": "pc-microbiology-lm",
"text": {
"status": "extensions",
"div": "<!-- snip (see above) -->"
},
"url": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-microbiology-lm",
"version": "0.1.0-ci-build",
"name": "PcMicrobiology",
"title": "Microbiology logical model",
"status": "draft",
"date": "2026-02-09T17:40:58+00:00",
"publisher": "Protect Child",
"contact": [
{
"name": "Protect Child",
"telecom": [
{
"system": "url",
"value": "https://protect-child.eu/"
}
]
}
],
"description": "Logical model representing the PROTECT-CHILD data model entity `microbiology`.",
"fhirVersion": "4.0.1",
"kind": "logical",
"abstract": false,
"type": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-microbiology-lm",
"baseDefinition": "http://hl7.org/fhir/StructureDefinition/Base",
"derivation": "specialization",
"snapshot": {
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/snapshot-base-version",
"valueString": "4.0.1"
}
],
"element": [
{
"id": "pc-microbiology-lm",
"path": "pc-microbiology-lm",
"short": "Microbiology logical model",
"definition": "Logical model representing the PROTECT-CHILD data model entity `microbiology`.",
"min": 0,
"max": "*",
"base": {
"path": "Base",
"min": 0,
"max": "*"
},
"isModifier": false
},
{
"id": "pc-microbiology-lm.microbiologyId",
"path": "pc-microbiology-lm.microbiologyId",
"short": "Microbiology id",
"definition": "Field `microbiology_id` from the PROTECT-CHILD data model.",
"min": 1,
"max": "1",
"base": {
"path": "pc-microbiology-lm.microbiologyId",
"min": 1,
"max": "1"
},
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-microbiology-lm.patientId",
"path": "pc-microbiology-lm.patientId",
"short": "Patient id",
"definition": "Field `patient_id` from the PROTECT-CHILD data model. Foreign key to `patient`.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.patientId",
"min": 0,
"max": "1"
},
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-microbiology-lm.donorId",
"path": "pc-microbiology-lm.donorId",
"short": "Donor id",
"definition": "Field `donor_id` from the PROTECT-CHILD data model. Foreign key to `donor`.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.donorId",
"min": 0,
"max": "1"
},
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-microbiology-lm.ebvDna",
"path": "pc-microbiology-lm.ebvDna",
"short": "Ebv dna",
"definition": "Field `ebv_dna` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.ebvDna",
"min": 0,
"max": "1"
},
"type": [
{
"code": "decimal"
}
]
},
{
"id": "pc-microbiology-lm.ebvIgmAntiEa",
"path": "pc-microbiology-lm.ebvIgmAntiEa",
"short": "Ebv igm anti ea",
"definition": "Field `ebv_igm_anti_ea` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.ebvIgmAntiEa",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.ebvIgmAntiVca",
"path": "pc-microbiology-lm.ebvIgmAntiVca",
"short": "Ebv igm anti vca",
"definition": "Field `ebv_igm_anti_vca` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.ebvIgmAntiVca",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.ebvIggAntiVca",
"path": "pc-microbiology-lm.ebvIggAntiVca",
"short": "Ebv igg anti vca",
"definition": "Field `ebv_igg_anti_vca` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.ebvIggAntiVca",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.ebvIggEbna",
"path": "pc-microbiology-lm.ebvIggEbna",
"short": "Ebv igg ebna",
"definition": "Field `ebv_igg_ebna` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.ebvIggEbna",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.cmvDna",
"path": "pc-microbiology-lm.cmvDna",
"short": "Cmv dna",
"definition": "Field `cmv_dna` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.cmvDna",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.cmvIgm",
"path": "pc-microbiology-lm.cmvIgm",
"short": "Cmv igm",
"definition": "Field `cmv_igm` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.cmvIgm",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.cmvIgg",
"path": "pc-microbiology-lm.cmvIgg",
"short": "Cmv igg",
"definition": "Field `cmv_igg` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.cmvIgg",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.parvovirusB19Dna",
"path": "pc-microbiology-lm.parvovirusB19Dna",
"short": "Parvovirus b19 dna",
"definition": "Field `parvovirus_b19_dna` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.parvovirusB19Dna",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.parvovirusB19DnaIgg",
"path": "pc-microbiology-lm.parvovirusB19DnaIgg",
"short": "Parvovirus b19 dna igg",
"definition": "Field `parvovirus_b19_dna_igg` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.parvovirusB19DnaIgg",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.parvovirusB19DnaIgm",
"path": "pc-microbiology-lm.parvovirusB19DnaIgm",
"short": "Parvovirus b19 dna igm",
"definition": "Field `parvovirus_b19_dna_igm` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.parvovirusB19DnaIgm",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.hsvIgg",
"path": "pc-microbiology-lm.hsvIgg",
"short": "Hsv igg",
"definition": "Field `hsv_igg` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.hsvIgg",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.hsvIgm",
"path": "pc-microbiology-lm.hsvIgm",
"short": "Hsv igm",
"definition": "Field `hsv_igm` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.hsvIgm",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.adenovirusIgg",
"path": "pc-microbiology-lm.adenovirusIgg",
"short": "Adenovirus igg",
"definition": "Field `adenovirus_igg` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.adenovirusIgg",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.adenovirusIgm",
"path": "pc-microbiology-lm.adenovirusIgm",
"short": "Adenovirus igm",
"definition": "Field `adenovirus_igm` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.adenovirusIgm",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.vzvIgg",
"path": "pc-microbiology-lm.vzvIgg",
"short": "Vzv igg",
"definition": "Field `vzv_igg` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.vzvIgg",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.vzvIgm",
"path": "pc-microbiology-lm.vzvIgm",
"short": "Vzv igm",
"definition": "Field `vzv_igm` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.vzvIgm",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.bloodBkvDna",
"path": "pc-microbiology-lm.bloodBkvDna",
"short": "Blood bkv dna",
"definition": "Field `blood_bkv_dna` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.bloodBkvDna",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.urineBkvDna",
"path": "pc-microbiology-lm.urineBkvDna",
"short": "Urine bkv dna",
"definition": "Field `urine_bkv_dna` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.urineBkvDna",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.bkvDnaKidneyBiopsy",
"path": "pc-microbiology-lm.bkvDnaKidneyBiopsy",
"short": "Bkv dna kidney biopsy",
"definition": "Field `bkv_dna_kidney_biopsy` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.bkvDnaKidneyBiopsy",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.bkvFishKidneyBiopsy",
"path": "pc-microbiology-lm.bkvFishKidneyBiopsy",
"short": "Bkv fish kidney biopsy",
"definition": "Field `bkv_fish_kidney_biopsy` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-microbiology-lm.bkvFishKidneyBiopsy",
"min": 0,
"max": "1"
},
"type": [
{
"code": "boolean"
}
]
}
]
},
"differential": {
"element": [
{
"id": "pc-microbiology-lm",
"path": "pc-microbiology-lm",
"short": "Microbiology logical model",
"definition": "Logical model representing the PROTECT-CHILD data model entity `microbiology`."
},
{
"id": "pc-microbiology-lm.microbiologyId",
"path": "pc-microbiology-lm.microbiologyId",
"short": "Microbiology id",
"definition": "Field `microbiology_id` from the PROTECT-CHILD data model.",
"min": 1,
"max": "1",
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-microbiology-lm.patientId",
"path": "pc-microbiology-lm.patientId",
"short": "Patient id",
"definition": "Field `patient_id` from the PROTECT-CHILD data model. Foreign key to `patient`.",
"min": 0,
"max": "1",
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-microbiology-lm.donorId",
"path": "pc-microbiology-lm.donorId",
"short": "Donor id",
"definition": "Field `donor_id` from the PROTECT-CHILD data model. Foreign key to `donor`.",
"min": 0,
"max": "1",
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-microbiology-lm.ebvDna",
"path": "pc-microbiology-lm.ebvDna",
"short": "Ebv dna",
"definition": "Field `ebv_dna` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "decimal"
}
]
},
{
"id": "pc-microbiology-lm.ebvIgmAntiEa",
"path": "pc-microbiology-lm.ebvIgmAntiEa",
"short": "Ebv igm anti ea",
"definition": "Field `ebv_igm_anti_ea` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.ebvIgmAntiVca",
"path": "pc-microbiology-lm.ebvIgmAntiVca",
"short": "Ebv igm anti vca",
"definition": "Field `ebv_igm_anti_vca` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.ebvIggAntiVca",
"path": "pc-microbiology-lm.ebvIggAntiVca",
"short": "Ebv igg anti vca",
"definition": "Field `ebv_igg_anti_vca` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.ebvIggEbna",
"path": "pc-microbiology-lm.ebvIggEbna",
"short": "Ebv igg ebna",
"definition": "Field `ebv_igg_ebna` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.cmvDna",
"path": "pc-microbiology-lm.cmvDna",
"short": "Cmv dna",
"definition": "Field `cmv_dna` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.cmvIgm",
"path": "pc-microbiology-lm.cmvIgm",
"short": "Cmv igm",
"definition": "Field `cmv_igm` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.cmvIgg",
"path": "pc-microbiology-lm.cmvIgg",
"short": "Cmv igg",
"definition": "Field `cmv_igg` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.parvovirusB19Dna",
"path": "pc-microbiology-lm.parvovirusB19Dna",
"short": "Parvovirus b19 dna",
"definition": "Field `parvovirus_b19_dna` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.parvovirusB19DnaIgg",
"path": "pc-microbiology-lm.parvovirusB19DnaIgg",
"short": "Parvovirus b19 dna igg",
"definition": "Field `parvovirus_b19_dna_igg` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.parvovirusB19DnaIgm",
"path": "pc-microbiology-lm.parvovirusB19DnaIgm",
"short": "Parvovirus b19 dna igm",
"definition": "Field `parvovirus_b19_dna_igm` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.hsvIgg",
"path": "pc-microbiology-lm.hsvIgg",
"short": "Hsv igg",
"definition": "Field `hsv_igg` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.hsvIgm",
"path": "pc-microbiology-lm.hsvIgm",
"short": "Hsv igm",
"definition": "Field `hsv_igm` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.adenovirusIgg",
"path": "pc-microbiology-lm.adenovirusIgg",
"short": "Adenovirus igg",
"definition": "Field `adenovirus_igg` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.adenovirusIgm",
"path": "pc-microbiology-lm.adenovirusIgm",
"short": "Adenovirus igm",
"definition": "Field `adenovirus_igm` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.vzvIgg",
"path": "pc-microbiology-lm.vzvIgg",
"short": "Vzv igg",
"definition": "Field `vzv_igg` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.vzvIgm",
"path": "pc-microbiology-lm.vzvIgm",
"short": "Vzv igm",
"definition": "Field `vzv_igm` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.bloodBkvDna",
"path": "pc-microbiology-lm.bloodBkvDna",
"short": "Blood bkv dna",
"definition": "Field `blood_bkv_dna` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.urineBkvDna",
"path": "pc-microbiology-lm.urineBkvDna",
"short": "Urine bkv dna",
"definition": "Field `urine_bkv_dna` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.bkvDnaKidneyBiopsy",
"path": "pc-microbiology-lm.bkvDnaKidneyBiopsy",
"short": "Bkv dna kidney biopsy",
"definition": "Field `bkv_dna_kidney_biopsy` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
},
{
"id": "pc-microbiology-lm.bkvFishKidneyBiopsy",
"path": "pc-microbiology-lm.bkvFishKidneyBiopsy",
"short": "Bkv fish kidney biopsy",
"definition": "Field `bkv_fish_kidney_biopsy` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "boolean"
}
]
}
]
}
}