FHIR IG analytics| Package | pc.ig |
| Resource Type | StructureDefinition |
| Id | StructureDefinition-pc-methylomic-study-lm.json |
| FHIR Version | R4 |
| Source | https://build.fhir.org/ig/hl7-eu/protect-child/StructureDefinition-pc-methylomic-study-lm.html |
| URL | https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-methylomic-study-lm |
| Version | 0.1.0-ci-build |
| Status | draft |
| Date | 2026-02-09T17:40:58+00:00 |
| Name | PcMethylomicStudy |
| Title | MethylomicStudy logical model |
| Description | Logical model representing the PROTECT-CHILD data model entity `methylomic_study`. |
| Type | https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-methylomic-study-lm |
| Kind | logical |
No resources found
No resources found
Note: links and images are rebased to the (stated) source
Generated Narrative: StructureDefinition pc-methylomic-study-lm
| Name | Flags | Card. | Type | Description & Constraints |
|---|---|---|---|---|
  pc-methylomic-study-lm | 0..* | Base | MethylomicStudy logical model | |
  methylomicStudyId | 1..1 | string | Methylomic study id | |
| referenceGenomeId | 0..1 | string | Reference genome id | |
| targetRegionId | 0..1 | string | Target region id | |
| betaValue | 0..1 | decimal | Beta value | |
| mValue | 0..1 | decimal | M value | |
| detectionPValue | 0..1 | decimal | Detection p value | |
| readCount | 0..1 | integer | Read count | |
 methylatedReads | 0..1 | integer | Methylated reads | |
| Documentation for this format | ||||
FHIR
FHIRsmith{
"resourceType": "StructureDefinition",
"id": "pc-methylomic-study-lm",
"text": {
"status": "extensions",
"div": "<!-- snip (see above) -->"
},
"url": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-methylomic-study-lm",
"version": "0.1.0-ci-build",
"name": "PcMethylomicStudy",
"title": "MethylomicStudy logical model",
"status": "draft",
"date": "2026-02-09T17:40:58+00:00",
"publisher": "Protect Child",
"contact": [
{
"name": "Protect Child",
"telecom": [
{
"system": "url",
"value": "https://protect-child.eu/"
}
]
}
],
"description": "Logical model representing the PROTECT-CHILD data model entity `methylomic_study`.",
"fhirVersion": "4.0.1",
"kind": "logical",
"abstract": false,
"type": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-methylomic-study-lm",
"baseDefinition": "http://hl7.org/fhir/StructureDefinition/Base",
"derivation": "specialization",
"snapshot": {
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/snapshot-base-version",
"valueString": "4.0.1"
}
],
"element": [
{
"id": "pc-methylomic-study-lm",
"path": "pc-methylomic-study-lm",
"short": "MethylomicStudy logical model",
"definition": "Logical model representing the PROTECT-CHILD data model entity `methylomic_study`.",
"min": 0,
"max": "*",
"base": {
"path": "Base",
"min": 0,
"max": "*"
},
"isModifier": false
},
{
"id": "pc-methylomic-study-lm.methylomicStudyId",
"path": "pc-methylomic-study-lm.methylomicStudyId",
"short": "Methylomic study id",
"definition": "Field `methylomic_study_id` from the PROTECT-CHILD data model. Foreign key to `bio_sample`.",
"min": 1,
"max": "1",
"base": {
"path": "pc-methylomic-study-lm.methylomicStudyId",
"min": 1,
"max": "1"
},
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-methylomic-study-lm.referenceGenomeId",
"path": "pc-methylomic-study-lm.referenceGenomeId",
"short": "Reference genome id",
"definition": "Field `reference_genome_id` from the PROTECT-CHILD data model. Foreign key to `reference_genome`.",
"min": 0,
"max": "1",
"base": {
"path": "pc-methylomic-study-lm.referenceGenomeId",
"min": 0,
"max": "1"
},
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-methylomic-study-lm.targetRegionId",
"path": "pc-methylomic-study-lm.targetRegionId",
"short": "Target region id",
"definition": "Field `target_region_id` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-methylomic-study-lm.targetRegionId",
"min": 0,
"max": "1"
},
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-methylomic-study-lm.betaValue",
"path": "pc-methylomic-study-lm.betaValue",
"short": "Beta value",
"definition": "Field `beta_value` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-methylomic-study-lm.betaValue",
"min": 0,
"max": "1"
},
"type": [
{
"code": "decimal"
}
]
},
{
"id": "pc-methylomic-study-lm.mValue",
"path": "pc-methylomic-study-lm.mValue",
"short": "M value",
"definition": "Field `m_value` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-methylomic-study-lm.mValue",
"min": 0,
"max": "1"
},
"type": [
{
"code": "decimal"
}
]
},
{
"id": "pc-methylomic-study-lm.detectionPValue",
"path": "pc-methylomic-study-lm.detectionPValue",
"short": "Detection p value",
"definition": "Field `detection_p_value` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-methylomic-study-lm.detectionPValue",
"min": 0,
"max": "1"
},
"type": [
{
"code": "decimal"
}
]
},
{
"id": "pc-methylomic-study-lm.readCount",
"path": "pc-methylomic-study-lm.readCount",
"short": "Read count",
"definition": "Field `read_count` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-methylomic-study-lm.readCount",
"min": 0,
"max": "1"
},
"type": [
{
"code": "integer"
}
]
},
{
"id": "pc-methylomic-study-lm.methylatedReads",
"path": "pc-methylomic-study-lm.methylatedReads",
"short": "Methylated reads",
"definition": "Field `methylated_reads` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"base": {
"path": "pc-methylomic-study-lm.methylatedReads",
"min": 0,
"max": "1"
},
"type": [
{
"code": "integer"
}
]
}
]
},
"differential": {
"element": [
{
"id": "pc-methylomic-study-lm",
"path": "pc-methylomic-study-lm",
"short": "MethylomicStudy logical model",
"definition": "Logical model representing the PROTECT-CHILD data model entity `methylomic_study`."
},
{
"id": "pc-methylomic-study-lm.methylomicStudyId",
"path": "pc-methylomic-study-lm.methylomicStudyId",
"short": "Methylomic study id",
"definition": "Field `methylomic_study_id` from the PROTECT-CHILD data model. Foreign key to `bio_sample`.",
"min": 1,
"max": "1",
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-methylomic-study-lm.referenceGenomeId",
"path": "pc-methylomic-study-lm.referenceGenomeId",
"short": "Reference genome id",
"definition": "Field `reference_genome_id` from the PROTECT-CHILD data model. Foreign key to `reference_genome`.",
"min": 0,
"max": "1",
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-methylomic-study-lm.targetRegionId",
"path": "pc-methylomic-study-lm.targetRegionId",
"short": "Target region id",
"definition": "Field `target_region_id` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "string"
}
]
},
{
"id": "pc-methylomic-study-lm.betaValue",
"path": "pc-methylomic-study-lm.betaValue",
"short": "Beta value",
"definition": "Field `beta_value` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "decimal"
}
]
},
{
"id": "pc-methylomic-study-lm.mValue",
"path": "pc-methylomic-study-lm.mValue",
"short": "M value",
"definition": "Field `m_value` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "decimal"
}
]
},
{
"id": "pc-methylomic-study-lm.detectionPValue",
"path": "pc-methylomic-study-lm.detectionPValue",
"short": "Detection p value",
"definition": "Field `detection_p_value` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "decimal"
}
]
},
{
"id": "pc-methylomic-study-lm.readCount",
"path": "pc-methylomic-study-lm.readCount",
"short": "Read count",
"definition": "Field `read_count` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "integer"
}
]
},
{
"id": "pc-methylomic-study-lm.methylatedReads",
"path": "pc-methylomic-study-lm.methylatedReads",
"short": "Methylated reads",
"definition": "Field `methylated_reads` from the PROTECT-CHILD data model.",
"min": 0,
"max": "1",
"type": [
{
"code": "integer"
}
]
}
]
}
}