FHIR IG analytics| Package | pc.ig |
| Resource Type | ImplementationGuide |
| Id | ImplementationGuide-hl7.eu.fhir.protect-child.json |
| FHIR Version | R4 |
| Source | https://build.fhir.org/ig/hl7-eu/protect-child/index.html |
| URL | https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ImplementationGuide/hl7.eu.fhir.protect-child |
| Version | 0.1.0-ci-build |
| Status | draft |
| Date | 2026-02-09T17:40:58+00:00 |
| Name | ProtectChildIG |
| Title | PROTECT-CHILD Pediatric Transplant Data Implementation Guide |
| Description | FHIR Implementation Guide for the PROTECT-CHILD project, defining a common pediatric transplant data model (recipient, donor, transplant events, follow-up, labs, microbiology, biospecimens, omics and outcomes) for use in local data space capsules and federated analytics. |
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Note: links and images are rebased to the (stated) source
Generated Narrative: ImplementationGuide hl7.eu.fhir.protect-child
The official URL for this implementation guide is:
https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ImplementationGuide/hl7.eu.fhir.protect-child
FHIR Implementation Guide for the PROTECT-CHILD project, defining a common pediatric transplant data model (recipient, donor, transplant events, follow-up, labs, microbiology, biospecimens, omics and outcomes) for use in local data space capsules and federated analytics.
FHIR
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],
"reference": {
"reference": "StructureDefinition/immunosuppressive-maintenance-auc"
},
"name": "Area under the concentration–time curve (AUC)",
"description": "auc – pharmacokinetic area under the curve for the immunosuppressant.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-array-date"
},
"name": "Array date",
"description": "Date when the array was run.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/marker-immune-function-atr1"
},
"name": "AT1R antibody result",
"description": "Angiotensin II type-1 receptor (AT1R) antibody result.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/methylomic-study-beta-value"
},
"name": "Beta value",
"description": "Beta value representing methylation level.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/biosample"
},
"name": "Biological Sample",
"description": "Biological sample linked to transplant patients and omics studies, aligned with the bio_sample table.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/visit-bio-sample-ref"
},
"name": "BioSample ID relationship",
"description": "Reference to the primary biosample collected at this visit (bio_sample_id).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-bio-sample-lm"
},
"name": "BioSample logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `bio_sample`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/biosample-tissue-type-cs"
},
"name": "BioSample Tissue Type CodeSystem",
"description": "Tissue types for biological samples (from the bio_sample table).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/biosample-tissue-type-vs"
},
"name": "BioSample Tissue Type ValueSet",
"description": "Allowed tissue types for BioSample.tissue_type.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-bisulfite-date"
},
"name": "Bisulfite date",
"description": "Date of bisulfite conversion.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-bisulfite-reference-kit"
},
"name": "Bisulfite reference kit",
"description": "Bisulfite conversion kit used in the epigenome experiment.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-bkv-fish-kidney-biopsy"
},
"name": "BKV FISH on kidney biopsy",
"description": "bkv_fish_kidney_biopsy – BK virus FISH on kidney biopsy; false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-bkv-dna-kidney-biopsy"
},
"name": "BKV-DNA on kidney biopsy",
"description": "bkv_dna_kidney_biopsy – detection of BK virus DNA on kidney biopsy; false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-blood-bkv-dna"
},
"name": "Blood BKV-DNA",
"description": "blood_bkv_dna – detection of BK virus DNA in blood; false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-cmv-dna"
},
"name": "Blood CMV-DNA",
"description": "cmv_dna – CMV nucleic acid test result (false=Negative, true=Positive).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-ebv-dna"
},
"name": "Blood EBV-DNA",
"description": "ebv_dna – EBV nucleic acid test result (quantitative, float).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-parvovirus-b19-dna"
},
"name": "Blood Parvovirus B19-DNA",
"description": "parvovirus_b19_dna – detection of parvovirus B19 DNA in blood; false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-chip-type"
},
"name": "Chip type",
"description": "Type of chip used for the epigenome array.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/genomic-test-chromosome-corrdinate"
},
"name": "Chromosome coordinate",
"description": "Coordinate system for numbering the chromosomes.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/target-region-chromosome-id"
},
"name": "Chromosome ID",
"description": "Chromosome identifier (e.g. 1–22, 23=X, 24=Y, 25=MT).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/clinical-variable"
},
"name": "Clinical Variable",
"description": "Clinical variables and vital signs recorded for a transplant patient.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/outcome-clinical-variable-ref"
},
"name": "Clinical variable ID relationship",
"description": "Reference to clinical variable/vital signs information associated with this outcome.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/visit-clinical-variable-ref"
},
"name": "Clinical variable ID relationship",
"description": "Reference to clinical variables recorded at this visit (clinical_variable_id).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-clinical-variable-lm"
},
"name": "ClinicalVariable logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `clinical_variable`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-cmv-igg"
},
"name": "CMV serology IgG",
"description": "cmv_igg – presence of IgG antibodies against CMV; false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-cmv-igm"
},
"name": "CMV serology IgM",
"description": "cmv_igm – presence of IgM antibodies against CMV; false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-cnv-locus"
},
"name": "CNV locus",
"description": "Locus information for CNV.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/transplant-cold-ischaemia-time"
},
"name": "Cold ischaemia time (minutes)",
"description": "Cold ischaemia time for the graft in minutes (cold_ischemia_time).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/concomitant-disease"
},
"name": "Concomitant Disease",
"description": "Relevant concomitant diseases associated to a subject or record.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/concomitant-disease-category"
},
"name": "Concomitant Disease Category",
"description": "Categories of relevant concomitant diseases.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/concomitant-disease-category-vs"
},
"name": "Concomitant Disease Category ValueSet",
"description": "ValueSet of relevant concomitant diseases.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/concomitant-episode-disease-ref"
},
"name": "Concomitant disease ID relationship",
"description": "Reference to the concomitant disease record associated with this episode.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/concomitant-disease-name"
},
"name": "Concomitant disease name(s)",
"description": "Set of relevant concomitant diseases.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/concomitant-episode"
},
"name": "Concomitant Episode",
"description": "Clinical episode related to a concomitant disease for a transplant patient.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/concomitant-medication-episode-ref"
},
"name": "Concomitant episode ID relationship",
"description": "Reference to the concomitant episode this medication belongs to.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/outcome-concomitant-episode-ref"
},
"name": "Concomitant episode ID relationship",
"description": "Reference to concomitant episode information associated with this outcome.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/visit-concomitant-episode-ref"
},
"name": "Concomitant episode ID relationship",
"description": "Reference to a concomitant episode associated with this visit (concomitant_episode_id).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/concomitant-medication"
},
"name": "Concomitant Medication",
"description": "Concomitant medication records associated with a concomitant episode.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/concomitant-medication-category"
},
"name": "Concomitant Medication Category",
"description": "Categories of concomitant medications.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/concomitant-medication-category-vs"
},
"name": "Concomitant Medication Category ValueSet",
"description": "ValueSet of concomitant medication categories.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-concomitant-disease-lm"
},
"name": "ConcomitantDisease logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `concomitant_disease`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-concomitant-episode-lm"
},
"name": "ConcomitantEpisode logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `concomitant_episode`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-concomitant-medication-lm"
},
"name": "ConcomitantMedication logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `concomitant_medication`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-copy-number"
},
"name": "Copy number",
"description": "Copy number value for CNV data.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/clinical-variable-date"
},
"name": "Date",
"description": "Date when vital signs were measured.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/patient-instrumental-investigation-date"
},
"name": "Date of instrumental investigation",
"description": "Date on which the instrumental investigation was performed.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-rs-id"
},
"name": "dbSNP rsID",
"description": "dbSNP reference ID (rsID) maintained by NCBI.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/methylomic-study-detection-p-value"
},
"name": "Detection p-value",
"description": "Detection p-value for the methylation measurement.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/dialysis-type-vs"
},
"name": "Dialysis method ValueSet",
"description": "Dialysis method values expressed using LOINC Answer codes (aligned with LOINC answer list LL2102-3 for 70958-4).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/clinical-variable-diastolic-blood-pressure"
},
"name": "Diastolic blood pressure",
"description": "Diastolic blood pressure in mmHg.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/biosample-dna-concentration"
},
"name": "DNA concentration",
"description": "dna_concentration – DNA concentration for the sample (float).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-donor-ref"
},
"name": "Donor ID relationship",
"description": "donor_id – reference to the donor associated with this microbiology record.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/donor-liver-type-observation"
},
"name": "Donor liver graft type observation",
"description": "Type of liver graft (complete vs partial) captured as an Observation (LOINC 74836-8).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/donor-liver-type-cs"
},
"name": "Donor Liver Type CodeSystem",
"description": "Type of liver donation (complete vs partial).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/donor-liver-type-vs"
},
"name": "Donor Liver Type ValueSet",
"description": "Allowed values for donor liver type (Complete, Partial).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-donor-lm"
},
"name": "Donor logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `donor`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/donor-pre-ktx-dialysis-type-observation"
},
"name": "Donor pre-KTX dialysis type observation",
"description": "Dialysis method prior to kidney transplantation (LOINC 70958-4).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/donor-type-ext"
},
"name": "Donor type",
"description": "Whether the donor is living or deceased.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/donor-type"
},
"name": "Donor type",
"description": "Living vs deceased donor classification.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/donor-type"
},
"name": "Donor type value set",
"description": "Allowed values for donor type (Living, Deceased).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/marker-immune-function-dsa"
},
"name": "Donor-specific antibody (DSA)",
"description": "Donor-specific antibody flag for the HLA antibody above (yes/no).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/transplant-donor-recipient-weight-ratio"
},
"name": "Donor/recipient weight ratio",
"description": "Ratio of donor graft weight to recipient body weight (d_r_weight_ration).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/immunosuppressive-maintenance-dose"
},
"name": "Dose of immunosuppressant",
"description": "dose – maintenance dose of the immunosuppressant.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-ebv-igg-anti-vca"
},
"name": "EBV serology IgG anti-VCA",
"description": "ebv_igg_anti_vca – presence of IgG antibodies against EBV Viral Capsid Antigen (VCA); false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-ebv-igg-ebna"
},
"name": "EBV serology IgG EBNA",
"description": "ebv_igg_ebna – presence of IgG antibodies against EBV Nuclear Antigen (EBNA); false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-ebv-igm-anti-ea"
},
"name": "EBV serology IgM anti-EA",
"description": "ebv_igm_anti_ea – presence of IgM antibodies against EBV Early Antigen (EA); false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-ebv-igm-anti-vca"
},
"name": "EBV serology IgM anti-VCA",
"description": "ebv_igm_anti_vca – presence of IgM antibodies against EBV Viral Capsid Antigen (VCA); false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/immunosuppressive-maintenance-end-date"
},
"name": "End date of maintenance therapy",
"description": "Date when this maintenance immunosuppressant regimen was stopped (if applicable).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/target-region-end-position"
},
"name": "End position",
"description": "End position of the target region (genomic coordinate).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study"
},
"name": "Epigenome Study",
"description": "Epigenome (e.g. methylation array) study metadata and platform details.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/biosample-epigenome-study-ref"
},
"name": "Epigenome Study ID Relationship",
"description": "epigenome_study_id – reference to epigenome study linked to this sample.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-epigenome-study-lm"
},
"name": "EpigenomeStudy logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `epigenome_study`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/concomitant-episode-date"
},
"name": "Episode date",
"description": "Date of the concomitant episode.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/concomitant-episode-description"
},
"name": "Episode description",
"description": "Description of the concomitant episode.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/marker-immune-function-etar"
},
"name": "ETAR antibody result",
"description": "Endothelin receptor type-A (ETAR) antibody result.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/post-event-description"
},
"name": "Event description",
"description": "Free-text description of the post-transplant event.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/post-event-end-date"
},
"name": "Event end date",
"description": "Date when the post-transplant event resolved or ended.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/post-event-onset-date"
},
"name": "Event onset date",
"description": "Date when the post-transplant event started.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Specimen"
}
],
"reference": {
"reference": "Specimen/biosample-example-1"
},
"name": "Example Biological Sample",
"description": "Example biological sample used in Visit example.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/biosample"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/clinical-variable-example-1"
},
"name": "Example Clinical Variables",
"description": "Example set of clinical variables for a transplant patient.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/clinical-variable"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/concomitant-disease-example-1"
},
"name": "Example Concomitant Disease",
"description": "Example record of a concomitant disease.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/concomitant-disease"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/concomitant-episode-example-1"
},
"name": "Example Concomitant Episode",
"description": "Example concomitant episode for a transplant patient.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/concomitant-episode"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/concomitant-medication-example-1"
},
"name": "Example Concomitant Medication",
"description": "Example concomitant medication for a concomitant episode.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/concomitant-medication"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExampleDonorABOGroupObservation1"
},
"name": "Example donor ABO observation",
"description": "ABO group for the transplant donor.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-abo-group-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExampleDonorHLATypingClassIObservation1"
},
"name": "Example donor HLA class I typing",
"description": "Example HLA class I typing result (A, B, C) for the donor.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-hla-typing-class-i-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExampleDonorHLATypingClassIIObservation1"
},
"name": "Example donor HLA class II typing",
"description": "Example HLA class II typing result (DP, DQ, DR) for the donor.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-hla-typing-class-ii-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExampleDonorLiverType1"
},
"name": "Example donor liver graft type",
"description": "Example donor liver graft type.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/donor-liver-type-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "List"
}
],
"reference": {
"reference": "List/ExampleDonorObservationsList1"
},
"name": "Example donor observations list",
"description": "An example List that links the donor to donor-level Observations.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-observations"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExampleDonorPRAObservation1"
},
"name": "Example donor PRA observation",
"description": "Example PRA (%) recorded for the donor (if available).",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-pra-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExampleDonorDialysisType1"
},
"name": "Example donor pre-KTX dialysis type",
"description": "Example donor dialysis method prior to kidney transplant.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/donor-pre-ktx-dialysis-type-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExampleDonorRhFactorObservation1"
},
"name": "Example donor Rh observation",
"description": "Rh type for the transplant donor.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-rh-factor-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/epigenome-study-example-1"
},
"name": "Example Epigenome Study",
"description": "Example epigenome (methylation array) study record.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/epigenome-study"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/genomic-test-example-1"
},
"name": "Example Genomic Test",
"description": "Example genomic test / sequencing platform configuration.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/genomic-test"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExampleHistDxDate1"
},
"name": "Example histological diagnosis date",
"description": "Example date of histological diagnosis.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-histological-diagnosis-date-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/immunosuppressant-example-1"
},
"name": "Example Immunosuppressant",
"description": "Example immunosuppressant drug definition.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/immunosuppressant"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/imm-ind-pat-example-1"
},
"name": "Example Immunosuppressant Induction to Patient",
"description": "Example record of immunosuppressive induction therapy given to a patient.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/immunosuppressive-induction-patient"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/immunosuppressive-maintenance-patient-example-1"
},
"name": "Example Immunosuppressive Maintenance to Patient",
"description": "Example record of maintenance immunosuppressive therapy for a transplant recipient.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/immunosuppressive-maintenance-patient"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/instrumental-investigation-example-1"
},
"name": "Example Instrumental Investigation",
"description": "Example imaging/instrumental investigation for a transplant patient.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/instrumental-investigation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/lab-result-observation-example-1"
},
"name": "Example Lab Result Observation",
"description": "Example creatinine result for a transplant recipient.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/lab-result-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/lab-test-example-1"
},
"name": "Example Lab Test",
"description": "Example definition of a lab test (Albumin).",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/lab-test"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "DiagnosticReport"
}
],
"reference": {
"reference": "DiagnosticReport/lab-report-example-1"
},
"name": "Example Laboratory Report",
"description": "Example lab report grouping a single creatinine result.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/lab-report"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExampleLiverDx1"
},
"name": "Example liver disease diagnosis",
"description": "Example liver diagnosis and diagnosis date.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-liver-disease-diagnosis-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/mark-imm-func-example-1"
},
"name": "Example Marker of Immune Function",
"description": "Example immune function marker record for a transplant patient.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/marker-immune-function"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/methylomic-study-example-1"
},
"name": "Example Methylomic Study",
"description": "Example methylomic record for a locus.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/microbiology-example-1"
},
"name": "Example Microbiology record",
"description": "Example microbiology panel for a transplant recipient.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/microbiology"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/outcome-example-1"
},
"name": "Example Outcome",
"description": "Example outcome record for a transplant patient.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/outcome"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/outcome-type-example-1"
},
"name": "Example Outcome Type",
"description": "Example outcome type: Chronic renal failure after pLTx.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/outcome-type"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExamplePatientABO1"
},
"name": "Example patient ABO observation",
"description": "ABO group for the transplant recipient.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-abo-group-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExamplePatientHLAClassI1"
},
"name": "Example patient HLA class I typing",
"description": "Example HLA class I typing result (A, B, C).",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-hla-typing-class-i-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExamplePatientHLAClassII1"
},
"name": "Example patient HLA class II typing",
"description": "Example HLA class II typing result (DP, DQ, DR).",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-hla-typing-class-ii-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/patient-instrumental-investigation-example-1"
},
"name": "Example Patient Instrumental Investigation",
"description": "Example of a patient instrumental investigation linked to InstrumentalInvestigation catalogue.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-instrumental-investigation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExamplePatientPRALast"
},
"name": "Example patient last PRA observation",
"description": "Most recent PRA (%).",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-pra-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExamplePatientPRAMax"
},
"name": "Example patient max PRA observation",
"description": "Maximum PRA (%).",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-pra-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "List"
}
],
"reference": {
"reference": "List/ExamplePatientObservationsList1"
},
"name": "Example patient observations list",
"description": "An example List that links the transplant recipient to their patient-level Observations.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-observations"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExamplePatientRh1"
},
"name": "Example patient Rh observation",
"description": "Rh type for the transplant recipient.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-rh-factor-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/post-event-type-example-1"
},
"name": "Example Post Event Type",
"description": "Example post-transplant event type: Episodes of AKI after LTx.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/post-event-type"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/post-event-example-1"
},
"name": "Example Post-Transplant Event",
"description": "Example of a post-transplant event (e.g., infection episode).",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/post-event"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/pre-medication-example-1"
},
"name": "Example Pre-medication",
"description": "Example record of pre-transplant medications.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pre-medication"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/reference-genome-grch38"
},
"name": "Example Reference Genome GRCh38",
"description": "Example GRCh38 reference genome used for genomic tests.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/reference-genome"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Observation"
}
],
"reference": {
"reference": "Observation/ExampleRenalDx1"
},
"name": "Example renal disease diagnosis",
"description": "Example renal diagnosis and diagnosis date.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-renal-disease-diagnosis-observation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/target-region-example-1"
},
"name": "Example Target Region",
"description": "Example target region linked to a genomic test.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/target-region"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Encounter"
}
],
"reference": {
"reference": "Encounter/TransplantExample1"
},
"name": "Example transplant",
"description": "Example transplant instance mapped from the transplant table.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/transplant"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Patient"
}
],
"reference": {
"reference": "Patient/ExampleDonor1"
},
"name": "Example transplant donor",
"description": "Example Patient instance conforming to Donor.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/donor"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Patient"
}
],
"reference": {
"reference": "Patient/ExamplePatientTransplant1"
},
"name": "Example transplant recipient",
"description": "Example Patient instance conforming to PatientTransplant.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/patient-transplant"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/variant-annotation-example-1"
},
"name": "Example Variant Annotation",
"description": "Example annotation for a variant occurrence.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/variant-annotation"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Basic"
}
],
"reference": {
"reference": "Basic/variant-occurrence-example-1"
},
"name": "Example Variant Occurrence",
"description": "Example variant occurrence linked to a target region.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/variant-occurrence"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "Encounter"
}
],
"reference": {
"reference": "Encounter/VisitExample1"
},
"name": "Example visit",
"description": "Example visit instance mapped from the visit table.",
"exampleCanonical": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/visit"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/transplant-first-warm-ischemia-time"
},
"name": "First warm ischaemia time (minutes)",
"description": "First warm ischaemia time for the graft in minutes (1_warm_ischemia_time).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-fusion-breakpoint"
},
"name": "Fusion breakpoint",
"description": "Genomic position where a fusion variant occurs.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-fusion-supporting-reads"
},
"name": "Fusion supporting reads",
"description": "Supporting read count of the fusion.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-genetic-origin"
},
"name": "Genetic origin",
"description": "Somatic or germline origin of the variant.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/genomic-test"
},
"name": "Genomic Test",
"description": "Definition of a genomic test / sequencing platform and pipeline configuration.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/biosample-genomic-test-ref"
},
"name": "Genomic Test ID Relationship",
"description": "genomic_test_id – reference to the genomic test configuration used for this sample.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-genomic-test-ref"
},
"name": "Genomic test ID relationship",
"description": "Reference to the genomic test used in this epigenome study.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/target-region-genomic-test-ref"
},
"name": "Genomic test ID relationship",
"description": "Reference to the genomic test (platform) containing this target region.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/genomic-test-name"
},
"name": "Genomic Test Name",
"description": "Name of the platform using sequencing, assigned by the institution.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/genomic-test-version"
},
"name": "Genomic Test Version",
"description": "Version of the platform using sequencing, assigned by the institution.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-genomic-test-lm"
},
"name": "GenomicTest logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `genomic_test`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-genotype"
},
"name": "Genotype",
"description": "Allele state.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/clinical-variable-heart-rate"
},
"name": "Heart rate",
"description": "Pulse rate in beats per minute.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/clinical-variable-height"
},
"name": "Height",
"description": "Patient’s height/length in centimeters.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/target-region-hgnc-id"
},
"name": "HGNC ID",
"description": "Gene ID based on HGNC nomenclature.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/target-region-hgnc-symbol"
},
"name": "HGNC symbol",
"description": "Gene symbol given by HGNC nomenclature.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-hgvs-c"
},
"name": "HGVS c. notation",
"description": "Nomenclature for the sequence variant at the DNA level (HGVS c. notation).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-hgvs-p"
},
"name": "HGVS p. notation",
"description": "Nomenclature for the sequence variant at the protein level (HGVS p. notation).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/patient-histological-diagnosis-date-observation"
},
"name": "Histological diagnosis date observation",
"description": "Date of histological diagnosis captured as an Observation date result (LOINC 77975-1).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/marker-immune-function-hla-antibody-class"
},
"name": "HLA antibody class or locus",
"description": "Class or locus of the HLA antibody being recorded.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/patient-hla-typing-class-i-observation"
},
"name": "HLA Class I typing observation",
"description": "HLA Class I (A, B, C) typing as an Observation panel (LOINC 96629-1).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/patient-hla-typing-class-ii-observation"
},
"name": "HLA Class II typing observation",
"description": "HLA Class II (DP, DQ, DR) typing as an Observation panel (LOINC 96640-8).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-hsv-igg"
},
"name": "HSV serology IgG",
"description": "hsv_igg – presence of IgG antibodies to HSV; false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-hsv-igm"
},
"name": "HSV serology IgM",
"description": "hsv_igm – presence of IgM antibodies to HSV; false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-imm-ind-pat-lm"
},
"name": "ImmIndPat logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `imm_ind_pat`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-imm-main-pat-lm"
},
"name": "ImmMainPat logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `imm_main_pat`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/immunosuppressant"
},
"name": "Immunosuppressant",
"description": "Immunosuppressive drug definition used in initial or maintenance therapy.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/immunosuppressive-induction-dose"
},
"name": "Immunosuppressant dose",
"description": "Dose of the selected immunosuppressant used for induction.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/immunosuppressant-drug-type-vs"
},
"name": "Immunosuppressant Drug Type",
"description": "ValueSet of immunosuppressive drug types.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/immunosuppressant-drug-type-cs"
},
"name": "Immunosuppressant Drug Type",
"description": "Types of immunosuppressive drugs used in the transplant setting.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/immunosuppressive-induction-imm-ref"
},
"name": "Immunosuppressant ID relationship",
"description": "Reference to the immunosuppressant drug used for induction.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/immunosuppressive-maintenance-immunosuppressant-ref"
},
"name": "Immunosuppressant ID relationship",
"description": "immunosuppressant_id – reference to the immunosuppressant drug used for maintenance.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/immunosuppressive-induction-patient"
},
"name": "Immunosuppressant Induction to Patient",
"description": "Record of immunosuppressive induction treatment given to a transplant patient.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-immunosuppressant-lm"
},
"name": "Immunosuppressant logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `immunosuppressant`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/immunosuppressant-name"
},
"name": "Immunosuppressant name",
"description": "Name/type of the immunosuppressant drug.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/visit-immunosuppressive-induction-ref"
},
"name": "Immunosuppressive induction ID relationship",
"description": "Reference to immunosuppressive induction treatment associated with this visit (imm_ind_pat_id).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/visit-immunosuppressive-maintenance-ref"
},
"name": "Immunosuppressive maintenance ID relationship",
"description": "Reference to immunosuppressive maintenance treatment associated with this visit (imm_main_pat_id).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/immunosuppressive-maintenance-patient"
},
"name": "Immunosuppressive Maintenance to Patient",
"description": "Maintenance immunosuppressive therapy given to the transplant patient, aligned with the immunosuppressive_maintenance_patient table.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/immunosuppressive-maintenance-type-cs"
},
"name": "Immunosuppressive Maintenance to Patient Type CodeSystem",
"description": "Type of immunosuppressive maintenance record.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/immunosuppressive-maintenance-type-vs"
},
"name": "Immunosuppressive Maintenance to Patient Type ValueSet",
"description": "Allowed types for immunosuppressive maintenance records.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/instrumental-investigation"
},
"name": "Instrumental Investigation",
"description": "Catalogue of instrumental investigation tests, aligned with the instrumental_investigation table.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/patient-instrumental-investigation-instrument-ref"
},
"name": "Instrumental investigation ID relationship",
"description": "instrumental_investigation_id – reference to the catalogue entry describing the test performed.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/instrumental-investigation-name-ext"
},
"name": "Instrumental investigation name",
"description": "Name of the instrumental investigation test conducted.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/instrumental-investigation-name-vs"
},
"name": "Instrumental Investigation Name",
"description": "ValueSet of instrumental investigation tests conducted.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/instrumental-investigation-name-cs"
},
"name": "Instrumental Investigation Name",
"description": "Types of instrumental investigation tests conducted.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-instrumental-investigation-lm"
},
"name": "InstrumentalInvestigation logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `instrumental_investigation`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/transplant-intraoperative-complications"
},
"name": "Intraoperative complications",
"description": "Whether and which complications occurred during surgery (intraoperative_complications).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/intraoperative-complication-cs"
},
"name": "Intraoperative Complications CodeSystem",
"description": "Intraoperative complications during liver transplantation.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/intraoperative-complication-vs"
},
"name": "Intraoperative Complications ValueSet",
"description": "Allowed intraoperative complications during liver transplantation.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/transplant-kidney-side"
},
"name": "Kidney side",
"description": "Transplanted kidney side (kidney_side).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/kidney-side-cs"
},
"name": "Kidney Side CodeSystem",
"description": "Side of the kidney for nephrectomy / transplant context.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/kidney-side-vs"
},
"name": "Kidney Side ValueSet",
"description": "Allowed values for kidney side.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/lab-result-observation"
},
"name": "Lab Result",
"description": "Individual laboratory result for a transplant recipient, aligned with the lab_result table.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/visit-lab-result-ref"
},
"name": "Lab result ID relationship",
"description": "Reference to laboratory results associated with this visit (lab_result_id).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/lab-result-patient-ref"
},
"name": "Lab result patient reference",
"description": "patient_id – reference to the transplant recipient for whom this lab result is recorded.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/lab-result-unit-vs"
},
"name": "Lab Result Unit ValueSet",
"description": "Allowed UCUM units of measurement for lab result values (unit column).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/lab-test"
},
"name": "Lab Test",
"description": "Definition of a laboratory test, including its name and unit.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/outcome-lab-test-ref"
},
"name": "Lab test ID relationship",
"description": "Reference to lab test definition associated with this outcome.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/lab-test-name-ext"
},
"name": "Lab test name",
"description": "Name of the laboratory test conducted.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/lab-test-name-vs"
},
"name": "Lab Test Name",
"description": "ValueSet of laboratory tests conducted.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/lab-test-name-cs"
},
"name": "Lab Test Name",
"description": "Types of laboratory tests conducted.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/lab-result-labtest-ref"
},
"name": "Lab test reference",
"description": "lab_test_id – reference to the lab test definition (LabTest catalog row) associated with this lab result.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/lab-report"
},
"name": "Laboratory DiagnosticReport",
"description": "Laboratory report grouping one or more lab result observations for a transplant recipient.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-lab-result-lm"
},
"name": "LabResult logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `lab_result`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-lab-test-lm"
},
"name": "LabTest logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `lab_test`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/patient-liver-disease-diagnosis-observation"
},
"name": "Liver disease diagnosis observation",
"description": "Primary liver disease diagnosis. Use effectiveDateTime as the diagnosis date and valueCodeableConcept as the diagnosis.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/methylomic-study-m-value"
},
"name": "M value",
"description": "M-value transformation of the beta value.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-manifest-number"
},
"name": "Manifest number",
"description": "Manifest number for the array.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/marker-immune-function"
},
"name": "Marker of Immune Function",
"description": "Markers of immune function including HLA and non-HLA antibodies for a transplant patient.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-mark-imm-func-lm"
},
"name": "MarkImmFunc logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `mark_imm_func`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/genomic-test-mean-target-coverage"
},
"name": "Mean target coverage",
"description": "Mean target coverage.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/concomitant-medication-code"
},
"name": "Medication",
"description": "Type of concomitant medication applied.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-annotation-medication"
},
"name": "Medication",
"description": "Medication(s) relevant to this variant annotation.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/methylomic-study-methylated-reads"
},
"name": "Methylated reads",
"description": "Number of reads showing methylation.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/methylomic-study"
},
"name": "Methylomic Study",
"description": "Methylomic study / locus-level methylation metrics.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/biosample-methylomic-study-ref"
},
"name": "Methylomic Study ID Relationship",
"description": "methylomic_study_id – reference to methylomic study linked to this sample.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-methylomic-study-lm"
},
"name": "MethylomicStudy logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `methylomic_study`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/marker-immune-function-mfi-value"
},
"name": "MFI value",
"description": "Median Fluorescence Intensity (MFI) for the HLA antibody listed in hla_antibody_class.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/microbiology"
},
"name": "Microbiology",
"description": "Microbiology results related to transplant recipients and/or donors, aligned with the microbiology table.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/outcome-microbiology-ref"
},
"name": "Microbiology ID relationship",
"description": "Reference to microbiology results associated with this outcome.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/visit-microbiology-ref"
},
"name": "Microbiology ID relationship",
"description": "Reference to microbiology results associated with this visit (microbiology_id).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-microbiology-lm"
},
"name": "Microbiology logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `microbiology`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/transplant-nephrectomy-original-kidney"
},
"name": "Nephrectomy of original kidney",
"description": "Whether the patient’s native kidney was surgically removed before the transplant (nephrectomy_original_kidney).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/transplant-intraoperative-complications-other"
},
"name": "Other intraoperative complications (free text)",
"description": "Specification of other types of complications during surgery (intraoperative_complications_other).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/pre-medication-other-medications"
},
"name": "Other pre-transplant medications",
"description": "other_medications – any other relevant pre-transplant medications.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/outcome"
},
"name": "Outcome",
"description": "Outcome information for transplant patients, linked to multiple clinical domains.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/outcome-date"
},
"name": "Outcome date",
"description": "Date associated with the outcome (e.g. assessment date).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/visit-outcome-ref"
},
"name": "Outcome ID relationship",
"description": "Reference to the outcome record associated with this visit (outcome_id).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-outcome-lm"
},
"name": "Outcome logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `outcome`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/outcome-type"
},
"name": "Outcome Type",
"description": "Definition of an outcome type used to categorize outcome records.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/outcome-type-ref"
},
"name": "Outcome type ID relationship",
"description": "Reference to the type/category of outcome.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/outcome-type-name-ext"
},
"name": "Outcome type name",
"description": "Name of the outcome type.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/outcome-type-name-vs"
},
"name": "Outcome Type Name",
"description": "ValueSet of post-transplant outcome types.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/outcome-type-name-cs"
},
"name": "Outcome Type Name",
"description": "Types of clinical outcomes after transplant.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-outcome-type-lm"
},
"name": "OutcomeType logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `outcome_type`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/clinical-variable-oxygen-saturation"
},
"name": "Oxygen saturation",
"description": "Oxygen saturation at rest, in percent.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-parvovirus-b19-dna-igg"
},
"name": "Parvovirus B19 serology IgG",
"description": "parvovirus_b19_dna_igg – presence of IgG antibodies to parvovirus B19; false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-parvovirus-b19-dna-igm"
},
"name": "Parvovirus B19 serology IgM",
"description": "parvovirus_b19_dna_igm – presence of IgM antibodies to parvovirus B19; false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/clinical-variable-patient-ref"
},
"name": "Patient ID relationship",
"description": "Reference to the patient for whom clinical variables are recorded.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/concomitant-episode-patient-ref"
},
"name": "Patient ID relationship",
"description": "Reference to the patient for whom the concomitant episode is recorded.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/immunosuppressive-induction-patient-ref"
},
"name": "Patient ID relationship",
"description": "Reference to the patient receiving immunosuppressive induction.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/marker-immune-function-patient-ref"
},
"name": "Patient ID relationship",
"description": "Reference to the patient for whom the immune function markers are recorded.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-patient-ref"
},
"name": "Patient ID relationship",
"description": "patient_id – reference to the transplant recipient associated with this microbiology record.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/outcome-patient-ref"
},
"name": "Patient ID relationship",
"description": "Reference to the patient for whom the outcome is recorded.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/patient-instrumental-investigation-patient-ref"
},
"name": "Patient ID relationship",
"description": "patient_id – reference to the transplant recipient for whom the instrumental investigation was performed.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/post-event-patient-ref"
},
"name": "Patient ID relationship",
"description": "Reference to the patient who experienced the post-transplant event.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/patient-instrumental-investigation"
},
"name": "Patient Instrumental Investigation",
"description": "Instrumental investigation performed on a transplant patient, aligned with the patient_instrumental_investigation table.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/outcome-patient-instrumental-investigation-ref"
},
"name": "Patient instrumental investigation ID relationship",
"description": "Reference to patient instrumental investigation associated with this outcome.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/visit-patient-instrumental-investigation-ref"
},
"name": "Patient instrumental investigation ID relationship",
"description": "Reference to a patient instrumental investigation associated with this visit (pat_inst_inv_id).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/patient-instrumental-investigation-result-cs"
},
"name": "Patient Instrumental Investigation Result CodeSystem",
"description": "Result of the instrumental investigation test conducted (Normal / Abnormal).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/patient-instrumental-investigation-result-vs"
},
"name": "Patient Instrumental Investigation Result ValueSet",
"description": "Allowed results for the instrumental investigation test (Normal, Abnormal).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-patient-lm"
},
"name": "Patient logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `patient`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/patient-observations"
},
"name": "Patient observations",
"description": "A curated list of patient-level observations (ABO, Rh, PRA, HLA typing, diagnoses, etc.) that reference a transplant recipient.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-pat-inst-inv-lm"
},
"name": "PatInstInv logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `pat_inst_inv`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/genomic-test-per-target-base-cover-100x"
},
"name": "Per target base cover x100",
"description": "Percentage of selected bases covered at ≥100x.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-pool-id"
},
"name": "Pool ID",
"description": "Identifier of the sample pool.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/post-event"
},
"name": "Post Event",
"description": "Clinical events occurring after transplant, associated with a patient and event type.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/outcome-post-event-ref"
},
"name": "Post event ID relationship",
"description": "Reference to post-transplant event associated with this outcome.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/post-event-type"
},
"name": "Post Event Type",
"description": "Definition of a post-transplant event type.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/post-event-type-ref"
},
"name": "Post event type ID relationship",
"description": "Reference to the type/category of the post-transplant event.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/post-event-type-name-ext"
},
"name": "Post event type name",
"description": "Name of the post-transplant event type.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/post-event-type-name-vs"
},
"name": "Post Event Type Name",
"description": "ValueSet of post-transplant event types.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/post-event-type-name-cs"
},
"name": "Post Event Type Name",
"description": "Types of post-transplant events.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/visit-post-event-ref"
},
"name": "Post-event ID relationship",
"description": "Reference to a post-transplant event (e.g. rejection episode) occurring at this visit (post_event_id).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-post-event-lm"
},
"name": "PostEvent logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `post_event`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-post-event-type-lm"
},
"name": "PostEventType logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `post_event_type`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/patient-pra-observation"
},
"name": "PRA observation",
"description": "Panel reactive antibody / cPRA as an Observation (LOINC 80737-0). Use Observation.method to mark max vs last.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/patient-pra-type-cs"
},
"name": "PRA Observation Type CodeSystem",
"description": "Distinguishes maximum (historical) vs most recent PRA measurements.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/patient-pra-type-vs"
},
"name": "PRA Observation Type ValueSet",
"description": "Allowed values for Observation.method when reporting maximum vs most recent PRA.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/immunosuppressive-maintenance-pre-dose-level"
},
"name": "Pre-dose drug level",
"description": "pre_dose_level – drug level measured immediately before dosing (trough level).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/pre-medication-antihypertensive-drug-cs"
},
"name": "Pre-medication Antihypertensive Drug CodeSystem",
"description": "Antihypertensive drugs used as pre-transplant medication.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/pre-medication-antihypertensive-drug-vs"
},
"name": "Pre-medication Antihypertensive Drug ValueSet",
"description": "Allowed antihypertensive drugs for antihypertensive_treatment.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/outcome-pre-medication-ref"
},
"name": "Pre-medication ID relationship",
"description": "Reference to pre-transplant medication information associated with this outcome.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/visit-pre-medication-ref"
},
"name": "Pre-medication ID relationship",
"description": "Reference to pre-medication information associated with this visit (pre_medication_id).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/pre-medication-patient-ref"
},
"name": "Pre-medication patient reference",
"description": "patient_id – reference to the transplant recipient for whom the pre-medication is recorded.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/pre-medication-type-cs"
},
"name": "Pre-medication Type CodeSystem",
"description": "Type of pre-transplant medication record.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/pre-medication-type-vs"
},
"name": "Pre-medication Type ValueSet",
"description": "Allowed type(s) for pre-medication records.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/pre-medication"
},
"name": "Pre-transplant Medication",
"description": "Pre-transplant medication record aligned with the pre_medication table.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-pre-medication-lm"
},
"name": "PreMedication logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `pre_medication`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-raw-data"
},
"name": "Raw data",
"description": "Link or identifier to raw data files.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/methylomic-study-read-count"
},
"name": "Read count",
"description": "Total number of reads for this locus.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/genomic-test-read-length"
},
"name": "Read length",
"description": "Information about the length of the read.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/genomic-test-read-type"
},
"name": "Read type",
"description": "Information about the method of sequence reading.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/immunosuppressive-maintenance-patient-ref"
},
"name": "Recipient patient reference",
"description": "patient_id – reference to the transplant recipient for whom maintenance therapy is recorded.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-reference-allele"
},
"name": "Reference allele",
"description": "Reference allele sequence (e.g., A).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/reference-genome"
},
"name": "Reference Genome",
"description": "Reference genome definition used by genomic tests, including build_name and FASTA path.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/reference-genome-build-cs"
},
"name": "Reference Genome Build CodeSystem",
"description": "Reference genome build names.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/reference-genome-build-vs"
},
"name": "Reference Genome Build ValueSet",
"description": "Allowed reference genome build names (GRCh38, GRCh37).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/reference-genome-fasta-path"
},
"name": "Reference genome FASTA path",
"description": "Filesystem or URI path of the reference genome FASTA file.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/genomic-test-reference-genome"
},
"name": "Reference Genome ID relationship",
"description": "Reference to the reference genome used for this genomic test.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/methylomic-study-reference-genome-ref"
},
"name": "Reference genome ID relationship",
"description": "Reference to the reference genome used in this methylomic study.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-reference-sequence"
},
"name": "Reference sequence",
"description": "Transcript ID based on a protein-coding RNA (mRNA), including accession and version number.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-reference-genome-lm"
},
"name": "ReferenceGenome logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `reference_genome`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/patient-renal-disease-diagnosis-observation"
},
"name": "Renal disease diagnosis observation",
"description": "Primary renal disease diagnosis. Use effectiveDateTime as the diagnosis date and valueCodeableConcept as the diagnosis.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/patient-instrumental-investigation-result"
},
"name": "Result of the instrumental investigation",
"description": "result – result of the instrumental investigation test conducted (Normal / Abnormal).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/patient-rh-factor-cs"
},
"name": "Rh Factor CodeSystem",
"description": "Rh factor for transplant recipients and donors.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/patient-rh-factor-observation"
},
"name": "Rh factor observation",
"description": "Rh type as an Observation (LOINC 10331-7). Reusable for both recipients and donors.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/patient-rh-factor-vs"
},
"name": "Rh Factor ValueSet",
"description": "Allowed Rh factor values for transplant recipients and donors.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/pre-medication-rituximab"
},
"name": "Rituximab pre-medication",
"description": "rituximab – any rituximab given pre-transplant.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-sample-id"
},
"name": "Sample ID",
"description": "Sample identifier used in the epigenome study.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/biosample-send-ingemm-date"
},
"name": "Sample send to INGEMM date",
"description": "send_ingemm_date – date when the sample was sent to INGEMM.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-sample-type"
},
"name": "Sample type",
"description": "Type of sample used in the epigenome study (Blood, Saliva, Other tissues).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-scan-date"
},
"name": "Scan date",
"description": "Date when the array was scanned.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/transplant-second-warm-ischemia-time"
},
"name": "Second warm ischaemia time (minutes)",
"description": "Second warm ischaemia time for the graft in minutes (2_warm_ischemia_time, kidney only).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-sentrix-barcodearray"
},
"name": "Sentrix barcode array",
"description": "Sentrix array barcode.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-sentrix-position"
},
"name": "Sentrix position",
"description": "Position on the Sentrix array.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-sequence-alteration"
},
"name": "Sequence alteration",
"description": "Structural variant type.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/genomic-test-sequencing-device"
},
"name": "Sequencing device",
"description": "Sequencer machine information.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-snp-reader-device"
},
"name": "SNP reader device",
"description": "Device used as SNP reader.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/immunosuppressive-maintenance-start-date"
},
"name": "Start date of maintenance therapy",
"description": "Date when this maintenance immunosuppressant regimen was started.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/target-region-start-position"
},
"name": "Start position",
"description": "Start position of the target region (genomic coordinate).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/clinical-variable-systolic-blood-pressure"
},
"name": "Systolic blood pressure",
"description": "Systolic blood pressure in mmHg.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/genomic-test-target-capture"
},
"name": "Target capture",
"description": "Information about the capture method of examined and targeted region.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/epigenome-study-target-disease-id"
},
"name": "Target disease ID",
"description": "Identifier of the target disease for this epigenome study.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/target-region"
},
"name": "Target Region",
"description": "Target gene / genomic region associated with a genomic test platform.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/methylomic-study-target-region-id"
},
"name": "Target region ID",
"description": "Identifier of the target region for which methylation information is recorded.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-target-region-ref"
},
"name": "Target region ID relationship",
"description": "Reference to the target region (gene/region) for which the variant information is recorded.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-target-region-lm"
},
"name": "TargetRegion logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `target_region`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/clinical-variable-temperature"
},
"name": "Temperature",
"description": "Body temperature in degrees Celsius.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/transplant-time-diagnosis-to-transplant"
},
"name": "Time from diagnosis to transplant (months)",
"description": "Months between disease diagnosis and transplant date (time_diag_to_tx).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/transplant"
},
"name": "Transplant",
"description": "Encounter profile representing a transplant, linking the transplant recipient and donor and aligned with the transplant table.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/donor"
},
"name": "Transplant Donor",
"description": "Transplant donor profile based on the FHIR Patient resource, aligned with the donor table.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/transplant-donor-ref"
},
"name": "Transplant donor reference",
"description": "Reference to the donor associated with this transplant.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/visit-transplant-ref"
},
"name": "Transplant ID relationship",
"description": "Reference to the transplant associated with this visit (transplant_id).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-transplant-lm"
},
"name": "Transplant logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `transplant`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/patient-transplant"
},
"name": "Transplant Recipient",
"description": "Transplant recipient profile based on the FHIR Patient resource, aligned with the patient table.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/transplant-type-cs"
},
"name": "Transplant Type CodeSystem",
"description": "Type of solid-organ transplant (liver, kidney, combined liver-kidney).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/transplant-type-vs"
},
"name": "Transplant Type ValueSet",
"description": "Allowed transplant types.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/transplant-biliary-anastomosis-type"
},
"name": "Type of surgical biliary anastomosis",
"description": "Type of biliary reconstruction used (type_surgical_biliary_anastomosis).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/biliary-anastomosis-type-cs"
},
"name": "Type of surgical biliary anastomosis CodeSystem",
"description": "Types of biliary anastomosis used in liver transplantation.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/biliary-anastomosis-type-vs"
},
"name": "Type of surgical biliary anastomosis ValueSet",
"description": "Allowed types of biliary anastomosis in liver transplant.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/lab-test-unit-ref"
},
"name": "Unit ID relationship",
"description": "Reference to the unit definition associated with this lab test.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-unit-lm"
},
"name": "Unit logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `unit`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-urine-bkv-dna"
},
"name": "Urine BKV-DNA",
"description": "urine_bkv_dna – detection of BK virus DNA in urine; false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/variant-annotation"
},
"name": "Variant Annotation",
"description": "Annotation of a variant occurrence using external databases and classifications.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/genomic-test-variant-calling-tools"
},
"name": "Variant calling tools",
"description": "Name and version of the variant calling tool.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-annotation-variant-class-level"
},
"name": "Variant class level",
"description": "Classification level for the variant.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-variant-exon-number"
},
"name": "Variant exon number",
"description": "Exon number in which the variant occurred.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-variant-feature"
},
"name": "Variant feature",
"description": "Functional variant type.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence"
},
"name": "Variant Occurrence",
"description": "Variant occurrence information within a target region.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-annotation-variant-occurrence-ref"
},
"name": "Variant occurrence ID relationship",
"description": "Reference to the variant occurrence this annotation refers to.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-annotation-variant-origin"
},
"name": "Variant origin",
"description": "Origin of the variant (e.g., inherited, de novo, somatic).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-annotation-variant-pathogeny"
},
"name": "Variant pathogenicity",
"description": "Pathogenicity assessment (e.g., pathogenic, likely pathogenic, VUS, benign).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-occurrence-variant-read-depth"
},
"name": "Variant read depth",
"description": "Variant depth divided by read depth.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/variant-annotation-variant-tier-level"
},
"name": "Variant tier level",
"description": "Tier level for the variant (e.g., Tier 1, Tier 2).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-variant-annotation-lm"
},
"name": "VariantAnnotation logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `variant_annotation`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-variant-occurrence-lm"
},
"name": "VariantOccurrence logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `variant_occurrence`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/transplant-vascular-anomalies"
},
"name": "Vascular anomalies",
"description": "Presence of relevant arterial/venous anatomical variants (vascular_anomalies).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/transplant-vessel-mismatch"
},
"name": "Vessel mismatch (donor-recipient)",
"description": "Whether there is a vessel size/configuration mismatch requiring tailoring (vessel_mismatch_d_r).",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:resource"
}
],
"reference": {
"reference": "StructureDefinition/visit"
},
"name": "Visit",
"description": "Encounter profile representing a visit in the transplant follow-up schedule, aligned with the visit table.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:logical"
}
],
"reference": {
"reference": "StructureDefinition/pc-visit-lm"
},
"name": "Visit logical model",
"description": "Logical model representing the PROTECT-CHILD data model entity `visit`.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "CodeSystem"
}
],
"reference": {
"reference": "CodeSystem/visit-type-cs"
},
"name": "Visit Type CodeSystem",
"description": "Type of visit in the transplant follow-up schedule.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "ValueSet"
}
],
"reference": {
"reference": "ValueSet/visit-type-vs"
},
"name": "Visit Type ValueSet",
"description": "Allowed types of visits in the transplant follow-up schedule.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-vzv-igg"
},
"name": "VZV serology IgG",
"description": "vzv_igg – presence of IgG antibodies to varicella–zoster virus; false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/microbiology-vzv-igm"
},
"name": "VZV serology IgM",
"description": "vzv_igm – presence of IgM antibodies to varicella–zoster virus; false=Negative, true=Positive.",
"exampleBoolean": false
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information",
"valueString": "StructureDefinition:extension"
}
],
"reference": {
"reference": "StructureDefinition/clinical-variable-weight"
},
"name": "Weight",
"description": "Patient’s weight in kilograms.",
"exampleBoolean": false
}
],
"page": {
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name",
"valueUrl": "toc.html"
}
],
"nameUrl": "toc.html",
"title": "Table of Contents",
"generation": "html",
"page": [
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name",
"valueUrl": "index.html"
}
],
"nameUrl": "index.html",
"title": "Home",
"generation": "markdown"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name",
"valueUrl": "mapping.html"
}
],
"nameUrl": "mapping.html",
"title": "Mapping",
"generation": "markdown"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name",
"valueUrl": "logical-models.html"
}
],
"nameUrl": "logical-models.html",
"title": "Logical Models",
"generation": "markdown"
},
{
"extension": [
{
"url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name",
"valueUrl": "data-model-erd.html"
}
],
"nameUrl": "data-model-erd.html",
"title": "Data Model (ERD)",
"generation": "markdown"
}
]
},
"parameter": [
{
"code": "path-resource",
"value": "input/capabilities"
},
{
"code": "path-resource",
"value": "input/examples"
},
{
"code": "path-resource",
"value": "input/extensions"
},
{
"code": "path-resource",
"value": "input/models"
},
{
"code": "path-resource",
"value": "input/operations"
},
{
"code": "path-resource",
"value": "input/profiles"
},
{
"code": "path-resource",
"value": "input/resources"
},
{
"code": "path-resource",
"value": "input/vocabulary"
},
{
"code": "path-resource",
"value": "input/maps"
},
{
"code": "path-resource",
"value": "input/testing"
},
{
"code": "path-resource",
"value": "input/history"
},
{
"code": "path-resource",
"value": "fsh-generated/resources"
},
{
"code": "path-pages",
"value": "template/config"
},
{
"code": "path-pages",
"value": "input/images"
},
{
"code": "path-tx-cache",
"value": "input-cache/txcache"
}
]
}
}