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FHIR IG analytics

Packagehl7.fhir.uv.shc-vaccination
Resource TypeValueSet
IdValueSet-lab-qualitative-test-covid.json
FHIR VersionR4
Sourcehttps://build.fhir.org/ig/HL7/fhir-shc-vaccination-ig/ValueSet-lab-qualitative-test-covid.html
URLhttp://hl7.org/fhir/uv/shc-vaccination/ValueSet/lab-qualitative-test-covid
Version1.0.0
Statusactive
Date2025-09-03T20:15:06+00:00
NameLabQualitativeTestCovidValueSet
TitleLOINCs identifying qualitative COVID lab tests
Realmuv
Authorityhl7
DescriptionThis value set includes a subset of the LOINCs found at <https://loinc.org/sars-cov-2-and-covid-19/> that identify COVID-19-related laboratory tests. Only those laboratory tests that include qualitative results we believe to be useful in SMART Health Cards are included.qualitative results we believe to be useful in SMART Health Cards are included.
CopyrightThis material contains content from LOINC (http://loinc.org). LOINC is copyright © 1995-2022, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee and is available at no cost under the license at http://loinc.org/license. LOINC® is a registered United States trademark of Regenstrief Institute, Inc

Resources that use this resource

StructureDefinition
shc-covid19-laboratory-result-observation-adCOVID-19 Laboratory Result Observation Profile - Allowable Data

Resources that this resource uses

CodeSystem
loinc.orgLOINC codes used in this IG

Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: ValueSet lab-qualitative-test-covid

  • Include these codes as defined in http://loinc.org
    CodeDisplay
    94307-6SARS-CoV-2 N gene Spec Ql NAA N1
    94308-4SARS-CoV-2 N gene Spec Ql NAA N2
    94309-2SARS-CoV-2 RNA Spec Ql NAA+probe
    94310-0SARS-related CoV N Spec Ql NAA N3
    94314-2SARS-CoV-2 RdRp Spec Ql NAA+probe
    94315-9SARS-rel CoV E gene Spec Ql NAA+probe
    94316-7SARS-CoV-2 N gene Spec Ql NAA+probe
    94500-6SARS-CoV-2 RNA Resp Ql NAA+probe
    94502-2SARS-rel CoV RNA Resp Ql NAA+probe
    94507-1SARS-CoV-2 IgG SerPlBld Ql IA.rapid
    94508-9SARS-CoV-2 IgM SerPlBld Ql IA.rapid
    94532-9SARS-rel CoV+MERS RNA Resp Ql NAA+probe
    94533-7SARS-CoV-2 N gene Resp Ql NAA+probe
    94534-5SARS-CoV-2 RdRp Resp Ql NAA+probe
    94547-7SARS-CoV-2 IgG+IgM SerPl Ql IA
    94558-4SARS-CoV-2 Ag Resp Ql IA.rapid
    94559-2SARS-CoV-2 ORF1ab Resp Ql NAA+probe
    94562-6SARS-CoV-2 IgA SerPl Ql IA
    94563-4SARS-CoV-2 IgG SerPl Ql IA
    94564-2SARS-CoV-2 IgM SerPl Ql IA
    94565-9SARS-CoV-2 RNA Nph Ql NAA+non-probe
    94639-2SARS-CoV-2 ORF1ab Spec Ql NAA+probe
    94640-0SARS-CoV-2 S gene Resp Ql NAA+probe
    94641-8SARS-CoV-2 S gene Spec Ql NAA+probe
    94647-5SARSr-CoV RNA Spec Ql NAA+probe
    94660-8SARS-CoV-2 RNA SerPl Ql NAA+probe
    94756-4SARS-CoV-2 N gene Resp Ql NAA N1
    94757-2SARS-CoV-2 N gene Resp Ql NAA N2
    94758-0SARS-rel CoV E gene Resp Ql NAA+probe
    94759-8SARS-CoV-2 RNA Nph Ql NAA+probe
    94760-6SARS-CoV-2 N gene Nph Ql NAA+probe
    94761-4SARS-CoV-2 IgG DBS Ql IA
    94762-2SARS-CoV-2 Ab SerPl Ql IA
    94763-0SARS-CoV-2 Spec Ql Cult
    94765-5SARS-rel CoV E gene SerPl Ql NAA+probe
    94766-3SARS-CoV-2 N gene SerPl Ql NAA+probe
    94767-1SARS-CoV-2 S gene SerPl Ql NAA+probe
    94768-9SARS-CoV-2 IgA SerPlBld Ql IA.rapid
    94822-4SARS-CoV-2 RNA Sal Ql Seq
    94845-5SARS-CoV-2 RNA Sal Ql NAA+probe
    95125-1SARS-CoV-2 IgA+IgM SerPl Ql IA
    95209-3SARS-CoV+SARS-CoV-2 Ag Resp Ql IA.rapid
    95406-5SARS-CoV-2 RNA Nose Ql NAA+probe
    95409-9SARS-CoV-2 N gene Nose Ql NAA+probe
    95411-5SARS-CoV-2 NAb Ser Ql pVNT
    95416-4SARS-CoV-2 IgM DBS Ql IA
    95423-0FLUABV + SARS-CoV-2 Resp NAA+probe
    95424-8SARS-CoV-2 RNA Resp Ql Seq
    95425-5SARS-CoV-2 N gene Sal Ql NAA+probe
    95542-7SARS-CoV-2 Ab SerPlBld Ql IA.rapid
    95608-6SARS-CoV-2 RNA Resp Ql NAA+non-probe
    95609-4SARS-CoV-2 S gene Resp Ql Seq
    95823-1SARS-rel CoV E gene Sal Ql NAA+probe
    95824-9SARS-CoV-2 ORF1ab Sal Ql NAA+probe
    95825-6SARS-CoV-2 Ab DBS Ql IA
    95970-0SARS-CoV-2 TCRB Bld Ql Seq
    95971-8SARS-CoV-2 IFN-g Bld Ql
    96091-4SARS-CoV-2 RdRp Sal Ql NAA+probe
    96119-3SARS-CoV-2 Ag Upper resp Ql IA
    96120-1SARS-CoV-2 RdRp Lower resp Ql NAA+probe
    96121-9SARS-rel CoV E gene Low resp Ql NAA+prb
    96122-7SARS-rel CoV E gene Upper resp Ql NAA+prb
    96123-5SARS-CoV-2 RdRp Upper resp Ql NAA+probe
    96448-6SARS-CoV-2 N gene Sal Ql NAA N1
    96603-6SARS-CoV-2 S RBD NAb SerPl Ql sVNT
    96752-1SARS-CoV-2 S gene mut Spec Ql
    96763-8SARS-CoV-2 E gene Resp Ql NAA+probe
    96765-3SARS-CoV-2 S gene Sal Ql NAA+probe
    96797-6SARS-CoV-2 RNA OPA wash Ql NAA+probe
    96829-7SARS-CoV-2 RNA Spec Donr Ql NAA+probe
    96957-6SARS-CoV-2 M gene Upper resp Ql NAA+prb
    96958-4SARS-CoV-2 N gene Sal Ql NAA N2
    96986-5SARS-CoV-2 N gene Nose Ql NAA+non-probe
    97097-0SARS-CoV-2 Ag Upper resp Ql IA.rapid
    97098-8SARS-CoV-2 Nsp2 Upper resp Ql NAA+probe
    98069-8SARS-CoV-2 Ab Sal Ql IA.rapid
    98131-6SARS-CoV-2 ORF1b Resp Ql NAA+probe
    98132-4SARS-CoV-2 ORF1a Resp Ql NAA+probe
    98493-0SARS-CoV-2 ORF1b Sal Ql NAA+probe
    98494-8SARS-CoV-2 ORF1a Sal Ql NAA+probe
    99596-9SARS-CoV-2 N IgG SerPl Ql IA
    99597-7SARS-CoV-2 S IgG SerPl Ql IA
    99772-6SARS-CoV-2 IFN-g Bld-Imp

Source1

{
  "resourceType": "ValueSet",
  "id": "lab-qualitative-test-covid",
  "text": {
    "status": "generated",
    "div": "<!-- snip (see above) -->"
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
      "valueCode": "pher"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
      "valueInteger": 4,
      "_valueInteger": {
        "extension": [
          {
            "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
            "valueCanonical": "http://hl7.org/fhir/uv/shc-vaccination/ImplementationGuide/hl7.fhir.uv.shc-vaccination"
          }
        ]
      }
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
      "valueCode": "trial-use",
      "_valueCode": {
        "extension": [
          {
            "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
            "valueCanonical": "http://hl7.org/fhir/uv/shc-vaccination/ImplementationGuide/hl7.fhir.uv.shc-vaccination"
          }
        ]
      }
    }
  ],
  "url": "http://hl7.org/fhir/uv/shc-vaccination/ValueSet/lab-qualitative-test-covid",
  "version": "1.0.0",
  "name": "LabQualitativeTestCovidValueSet",
  "title": "LOINCs identifying qualitative COVID lab tests",
  "status": "active",
  "experimental": false,
  "date": "2025-09-03T20:15:06+00:00",
  "publisher": "HL7 International / Public Health",
  "contact": [
    {
      "name": "HL7 International / Public Health",
      "telecom": [
        {
          "system": "url",
          "value": "http://www.hl7.org/Special/committees/pher"
        },
        {
          "system": "email",
          "value": "vci-ig@mitre.org"
        }
      ]
    }
  ],
  "description": "This value set includes a subset of the LOINCs found at <https://loinc.org/sars-cov-2-and-covid-19/> that identify COVID-19-related laboratory tests. Only those laboratory tests that include\nqualitative results we believe to be useful in SMART Health Cards are included.qualitative results we believe to be useful in SMART Health Cards are included.",
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "http://unstats.un.org/unsd/methods/m49/m49.htm",
          "code": "001"
        }
      ]
    }
  ],
  "copyright": "This material contains content from LOINC (http://loinc.org). LOINC is copyright © 1995-2022, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee and is available at no cost under the license at http://loinc.org/license. LOINC® is a registered United States trademark of Regenstrief Institute, Inc",
  "compose": {
    "include": [
      {
        "system": "http://loinc.org",
        "concept": [
          {
            "code": "94307-6",
            "display": "SARS-CoV-2 N gene Spec Ql NAA N1"
          },
          {
            "code": "94308-4",
            "display": "SARS-CoV-2 N gene Spec Ql NAA N2"
          },
          {
            "code": "94309-2",
            "display": "SARS-CoV-2 RNA Spec Ql NAA+probe"
          },
          {
            "code": "94310-0",
            "display": "SARS-related CoV N Spec Ql NAA N3"
          },
          {
            "code": "94314-2",
            "display": "SARS-CoV-2 RdRp Spec Ql NAA+probe"
          },
          {
            "code": "94315-9",
            "display": "SARS-rel CoV E gene Spec Ql NAA+probe"
          },
          {
            "code": "94316-7",
            "display": "SARS-CoV-2 N gene Spec Ql NAA+probe"
          },
          {
            "code": "94500-6",
            "display": "SARS-CoV-2 RNA Resp Ql NAA+probe"
          },
          {
            "code": "94502-2",
            "display": "SARS-rel CoV RNA Resp Ql NAA+probe"
          },
          {
            "code": "94507-1",
            "display": "SARS-CoV-2 IgG SerPlBld Ql IA.rapid"
          },
          {
            "code": "94508-9",
            "display": "SARS-CoV-2 IgM SerPlBld Ql IA.rapid"
          },
          {
            "code": "94532-9",
            "display": "SARS-rel CoV+MERS RNA Resp Ql NAA+probe"
          },
          {
            "code": "94533-7",
            "display": "SARS-CoV-2 N gene Resp Ql NAA+probe"
          },
          {
            "code": "94534-5",
            "display": "SARS-CoV-2 RdRp Resp Ql NAA+probe"
          },
          {
            "code": "94547-7",
            "display": "SARS-CoV-2 IgG+IgM SerPl Ql IA"
          },
          {
            "code": "94558-4",
            "display": "SARS-CoV-2 Ag Resp Ql IA.rapid"
          },
          {
            "code": "94559-2",
            "display": "SARS-CoV-2 ORF1ab Resp Ql NAA+probe"
          },
          {
            "code": "94562-6",
            "display": "SARS-CoV-2 IgA SerPl Ql IA"
          },
          {
            "code": "94563-4",
            "display": "SARS-CoV-2 IgG SerPl Ql IA"
          },
          {
            "code": "94564-2",
            "display": "SARS-CoV-2 IgM SerPl Ql IA"
          },
          {
            "code": "94565-9",
            "display": "SARS-CoV-2 RNA Nph Ql NAA+non-probe"
          },
          {
            "code": "94639-2",
            "display": "SARS-CoV-2 ORF1ab Spec Ql NAA+probe"
          },
          {
            "code": "94640-0",
            "display": "SARS-CoV-2 S gene Resp Ql NAA+probe"
          },
          {
            "code": "94641-8",
            "display": "SARS-CoV-2 S gene Spec Ql NAA+probe"
          },
          {
            "code": "94647-5",
            "display": "SARSr-CoV RNA Spec Ql NAA+probe"
          },
          {
            "code": "94660-8",
            "display": "SARS-CoV-2 RNA SerPl Ql NAA+probe"
          },
          {
            "code": "94756-4",
            "display": "SARS-CoV-2 N gene Resp Ql NAA N1"
          },
          {
            "code": "94757-2",
            "display": "SARS-CoV-2 N gene Resp Ql NAA N2"
          },
          {
            "code": "94758-0",
            "display": "SARS-rel CoV E gene Resp Ql NAA+probe"
          },
          {
            "code": "94759-8",
            "display": "SARS-CoV-2 RNA Nph Ql NAA+probe"
          },
          {
            "code": "94760-6",
            "display": "SARS-CoV-2 N gene Nph Ql NAA+probe"
          },
          {
            "code": "94761-4",
            "display": "SARS-CoV-2 IgG DBS Ql IA"
          },
          {
            "code": "94762-2",
            "display": "SARS-CoV-2 Ab SerPl Ql IA"
          },
          {
            "code": "94763-0",
            "display": "SARS-CoV-2 Spec Ql Cult"
          },
          {
            "code": "94765-5",
            "display": "SARS-rel CoV E gene SerPl Ql NAA+probe"
          },
          {
            "code": "94766-3",
            "display": "SARS-CoV-2 N gene SerPl Ql NAA+probe"
          },
          {
            "code": "94767-1",
            "display": "SARS-CoV-2 S gene SerPl Ql NAA+probe"
          },
          {
            "code": "94768-9",
            "display": "SARS-CoV-2 IgA SerPlBld Ql IA.rapid"
          },
          {
            "code": "94822-4",
            "display": "SARS-CoV-2 RNA Sal Ql Seq"
          },
          {
            "code": "94845-5",
            "display": "SARS-CoV-2 RNA Sal Ql NAA+probe"
          },
          {
            "code": "95125-1",
            "display": "SARS-CoV-2 IgA+IgM SerPl Ql IA"
          },
          {
            "code": "95209-3",
            "display": "SARS-CoV+SARS-CoV-2 Ag Resp Ql IA.rapid"
          },
          {
            "code": "95406-5",
            "display": "SARS-CoV-2 RNA Nose Ql NAA+probe"
          },
          {
            "code": "95409-9",
            "display": "SARS-CoV-2 N gene Nose Ql NAA+probe"
          },
          {
            "code": "95411-5",
            "display": "SARS-CoV-2 NAb Ser Ql pVNT"
          },
          {
            "code": "95416-4",
            "display": "SARS-CoV-2 IgM DBS Ql IA"
          },
          {
            "code": "95423-0",
            "display": "FLUABV + SARS-CoV-2 Resp NAA+probe"
          },
          {
            "code": "95424-8",
            "display": "SARS-CoV-2 RNA Resp Ql Seq"
          },
          {
            "code": "95425-5",
            "display": "SARS-CoV-2 N gene Sal Ql NAA+probe"
          },
          {
            "code": "95542-7",
            "display": "SARS-CoV-2 Ab SerPlBld Ql IA.rapid"
          },
          {
            "code": "95608-6",
            "display": "SARS-CoV-2 RNA Resp Ql NAA+non-probe"
          },
          {
            "code": "95609-4",
            "display": "SARS-CoV-2 S gene Resp Ql Seq"
          },
          {
            "code": "95823-1",
            "display": "SARS-rel CoV E gene Sal Ql NAA+probe"
          },
          {
            "code": "95824-9",
            "display": "SARS-CoV-2 ORF1ab Sal Ql NAA+probe"
          },
          {
            "code": "95825-6",
            "display": "SARS-CoV-2 Ab DBS Ql IA"
          },
          {
            "code": "95970-0",
            "display": "SARS-CoV-2 TCRB Bld Ql Seq"
          },
          {
            "code": "95971-8",
            "display": "SARS-CoV-2 IFN-g Bld Ql"
          },
          {
            "code": "96091-4",
            "display": "SARS-CoV-2 RdRp Sal Ql NAA+probe"
          },
          {
            "code": "96119-3",
            "display": "SARS-CoV-2 Ag Upper resp Ql IA"
          },
          {
            "code": "96120-1",
            "display": "SARS-CoV-2 RdRp Lower resp Ql NAA+probe"
          },
          {
            "code": "96121-9",
            "display": "SARS-rel CoV E gene Low resp Ql NAA+prb"
          },
          {
            "code": "96122-7",
            "display": "SARS-rel CoV E gene Upper resp Ql NAA+prb"
          },
          {
            "code": "96123-5",
            "display": "SARS-CoV-2 RdRp Upper resp Ql NAA+probe"
          },
          {
            "code": "96448-6",
            "display": "SARS-CoV-2 N gene Sal Ql NAA N1"
          },
          {
            "code": "96603-6",
            "display": "SARS-CoV-2 S RBD NAb SerPl Ql sVNT"
          },
          {
            "code": "96752-1",
            "display": "SARS-CoV-2 S gene mut Spec Ql"
          },
          {
            "code": "96763-8",
            "display": "SARS-CoV-2 E gene Resp Ql NAA+probe"
          },
          {
            "code": "96765-3",
            "display": "SARS-CoV-2 S gene Sal Ql NAA+probe"
          },
          {
            "code": "96797-6",
            "display": "SARS-CoV-2 RNA OPA wash Ql NAA+probe"
          },
          {
            "code": "96829-7",
            "display": "SARS-CoV-2 RNA Spec Donr Ql NAA+probe"
          },
          {
            "code": "96957-6",
            "display": "SARS-CoV-2 M gene Upper resp Ql NAA+prb"
          },
          {
            "code": "96958-4",
            "display": "SARS-CoV-2 N gene Sal Ql NAA N2"
          },
          {
            "code": "96986-5",
            "display": "SARS-CoV-2 N gene Nose Ql NAA+non-probe"
          },
          {
            "code": "97097-0",
            "display": "SARS-CoV-2 Ag Upper resp Ql IA.rapid"
          },
          {
            "code": "97098-8",
            "display": "SARS-CoV-2 Nsp2 Upper resp Ql NAA+probe"
          },
          {
            "code": "98069-8",
            "display": "SARS-CoV-2 Ab Sal Ql IA.rapid"
          },
          {
            "code": "98131-6",
            "display": "SARS-CoV-2 ORF1b Resp Ql NAA+probe"
          },
          {
            "code": "98132-4",
            "display": "SARS-CoV-2 ORF1a Resp Ql NAA+probe"
          },
          {
            "code": "98493-0",
            "display": "SARS-CoV-2 ORF1b Sal Ql NAA+probe"
          },
          {
            "code": "98494-8",
            "display": "SARS-CoV-2 ORF1a Sal Ql NAA+probe"
          },
          {
            "code": "99596-9",
            "display": "SARS-CoV-2 N IgG SerPl Ql IA"
          },
          {
            "code": "99597-7",
            "display": "SARS-CoV-2 S IgG SerPl Ql IA"
          },
          {
            "code": "99772-6",
            "display": "SARS-CoV-2 IFN-g Bld-Imp"
          }
        ]
      }
    ]
  }
}