FHIR IG analytics| Package | hl7.fhir.uv.omop |
| Resource Type | StructureMap |
| Id | StructureMap-PersonMap.json |
| FHIR Version | R5 |
| Source | https://build.fhir.org/ig/HL7/fhir-omop-ig/StructureMap-PersonMap.html |
| URL | http://hl7.org/fhir/uv/omop/StructureMap/PersonMap |
| Version | 1.0.0 |
| Status | draft |
| Date | 2026-04-02T22:51:15+00:00 |
| Name | PersonMap |
| Title | Mapping Patient resource to Person OMOP Domain |
| Realm | uv |
| Authority | hl7 |
| Description | This mapping maps FHIR Patient instances to OMOP Person Table objects. |
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Note: links and images are rebased to the (stated) source
Generated Narrative: StructureMap PersonMap
Language: en
/// url = 'http://hl7.org/fhir/uv/omop/StructureMap/PersonMap' /// name = 'PersonMap' /// title = 'Mapping Patient resource to Person OMOP Domain' /// status = 'draft' uses "http://hl7.org/fhir/StructureDefinition/Patient" alias Patient as source uses "http://hl7.org/fhir/uv/omop/StructureDefinition/Person" alias PersonTable as target group Person(source src : Patient, target tgt : PersonTable) { src.id as id -> tgt.person_source_value = id, tgt.person_id = '1'; // OMOP person ID would be a map from FHIR ID to an external key src.gender as gender -> tgt.gender_concept_id = translate(gender, 'http://hl7.org/fhir/uv/omop/ConceptMap/GenderClass', 'code'), tgt.gender_source_value = gender; src where (src.gender.empty()) -> tgt.gender_concept_id = '0', tgt.gender_source_value = 'unknown' "nogender"; src.birthDate as bdSrc -> tgt.birth_datetime = bdSrc, tgt.year_of_birth = (src.birthDate.toString().substring(0, 4)), tgt.month_of_birth = (src.birthDate.toString().substring(5, 2)), tgt.day_of_birth = (src.birthDate.toString().substring(8, 2)); }
FHIR
FHIRsmith{
"resourceType": "StructureMap",
"id": "PersonMap",
"language": "en",
"text": {
"status": "generated",
"div": "<!-- snip (see above) -->"
},
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
"valueCode": "brr"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
"valueInteger": 1,
"_valueInteger": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
"valueCanonical": "http://hl7.org/fhir/uv/omop/ImplementationGuide/hl7.fhir.uv.omop"
}
]
}
},
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode": "informative",
"_valueCode": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
"valueCanonical": "http://hl7.org/fhir/uv/omop/ImplementationGuide/hl7.fhir.uv.omop"
}
]
}
}
],
"url": "http://hl7.org/fhir/uv/omop/StructureMap/PersonMap",
"version": "1.0.0",
"name": "PersonMap",
"title": "Mapping Patient resource to Person OMOP Domain",
"status": "draft",
"date": "2026-04-02T22:51:15+00:00",
"publisher": "HL7 International / Biomedical Research and Regulation",
"contact": [
{
"name": "HL7 International / Biomedical Research and Regulation",
"telecom": [
{
"system": "url",
"value": "http://www.hl7.org/Special/committees/rcrim"
}
]
}
],
"description": "This mapping maps FHIR Patient instances to OMOP Person Table objects.",
"jurisdiction": [
{
"coding": [
{
"system": "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code": "001",
"display": "World"
}
]
}
],
"structure": [
{
"url": "http://hl7.org/fhir/StructureDefinition/Patient",
"mode": "source",
"alias": "Patient"
},
{
"url": "http://hl7.org/fhir/uv/omop/StructureDefinition/Person",
"mode": "target",
"alias": "PersonTable"
}
],
"group": [
{
"name": "Person",
"input": [
{
"name": "src",
"type": "Patient",
"mode": "source"
},
{
"name": "tgt",
"type": "PersonTable",
"mode": "target"
}
],
"rule": [
{
"name": "id",
"source": [
{
"context": "src",
"element": "id",
"variable": "id"
}
],
"target": [
{
"context": "tgt",
"element": "person_source_value",
"transform": "copy",
"parameter": [
{
"valueId": "id"
}
]
},
{
"context": "tgt",
"element": "person_id",
"transform": "copy",
"parameter": [
{
"valueString": "1"
}
]
}
],
"documentation": "OMOP person ID would be a map from FHIR ID to an external key"
},
{
"name": "gender",
"source": [
{
"context": "src",
"element": "gender",
"variable": "gender"
}
],
"target": [
{
"context": "tgt",
"element": "gender_concept_id",
"transform": "translate",
"parameter": [
{
"valueId": "gender"
},
{
"valueString": "http://hl7.org/fhir/uv/omop/ConceptMap/GenderClass"
},
{
"valueString": "code"
}
]
},
{
"context": "tgt",
"element": "gender_source_value",
"transform": "copy",
"parameter": [
{
"valueId": "gender"
}
]
}
]
},
{
"name": "nogender",
"source": [
{
"context": "src",
"condition": "(src.gender.empty())"
}
],
"target": [
{
"context": "tgt",
"element": "gender_concept_id",
"transform": "copy",
"parameter": [
{
"valueString": "0"
}
]
},
{
"context": "tgt",
"element": "gender_source_value",
"transform": "copy",
"parameter": [
{
"valueString": "unknown"
}
]
}
]
},
{
"name": "birthDate",
"source": [
{
"context": "src",
"element": "birthDate",
"variable": "bdSrc"
}
],
"target": [
{
"context": "tgt",
"element": "birth_datetime",
"transform": "copy",
"parameter": [
{
"valueId": "bdSrc"
}
]
},
{
"context": "tgt",
"element": "year_of_birth",
"transform": "evaluate",
"parameter": [
{
"valueString": "src.birthDate.toString().substring(0, 4)"
}
]
},
{
"context": "tgt",
"element": "month_of_birth",
"transform": "evaluate",
"parameter": [
{
"valueString": "src.birthDate.toString().substring(5, 2)"
}
]
},
{
"context": "tgt",
"element": "day_of_birth",
"transform": "evaluate",
"parameter": [
{
"valueString": "src.birthDate.toString().substring(8, 2)"
}
]
}
]
}
]
}
]
}