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Packagehl7.fhir.uv.molecular-definition-data-types
Resource TypeMolecularDefinition
IdMolecularDefinition-example-sequence-cyp2c19-downstream-region.json
FHIR VersionR6

Resources that use this resource

No resources found


Resources that this resource uses

No resources found


Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: MolecularDefinition example-sequence-cyp2c19-downstream-region

Language: en

Profile: Sequence

moleculeType: DNA Sequence

type: DNA Sequence

representation

extracted

startingMolecule: MolecularDefinition: moleculeType = DNA Sequence; type = DNA Sequence

coordinateInterval

CoordinateSystems

-System
*0-based interval counting

start: 97868

end: 99871

reverseComplement: false


Source1

{
  "resourceType": "MolecularDefinition",
  "id": "example-sequence-cyp2c19-downstream-region",
  "meta": {
    "profile": [
      "http://hl7.org/fhir/uv/molecular-definition-data-types/StructureDefinition/sequence"
    ]
  },
  "language": "en",
  "text": {
    "status": "generated",
    "div": "<!-- snip (see above) -->"
  },
  "moleculeType": {
    "coding": [
      {
        "system": "http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/molecule-type",
        "code": "dna",
        "display": "DNA Sequence"
      }
    ]
  },
  "type": [
    {
      "coding": [
        {
          "system": "http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/molecule-type",
          "code": "dna",
          "display": "DNA Sequence"
        }
      ]
    }
  ],
  "representation": [
    {
      "extracted": {
        "startingMolecule": {
          "reference": "MolecularDefinition/example-sequence-cyp2c19-accession"
        },
        "coordinateInterval": {
          "coordinateSystem": {
            "system": {
              "coding": [
                {
                  "system": "http://loinc.org",
                  "code": "LA30100-4",
                  "display": "0-based interval counting"
                }
              ]
            }
          },
          "startQuantity": {
            "value": 97868
          },
          "endQuantity": {
            "value": 99871
          }
        },
        "reverseComplement": false
      }
    }
  ]
}