| Package | hl7.fhir.uv.molecular-definition-data-types |
| Type | CodeSystem |
| Id | coordinate-origin |
| FHIR Version | R6 |
| Source | http://hl7.org/fhir/uv/molecular-definition-data-types/https://build.fhir.org/ig/HL7/molecular-definition-data-types/CodeSystem-coordinate-origin.html |
| URL | http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/coordinate-origin |
| Version | 1.0.0-ballot1 |
| Status | draft |
| Date | 2025-07-16T20:39:35+00:00 |
| Name | CoordinateOrigin |
| Title | Coordinate Origin |
| Realm | uv |
| Authority | hl7 |
| Description | Reference points for coordinate counting in molecular sequences |
| Content | complete |
No resources found
No resources found
Note: links and images are rebased to the (stated) source
Generated Narrative: CodeSystem coordinate-origin
This case-sensitive code system http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/coordinate-origin defines the following codes:
FHIR{
"resourceType": "CodeSystem",
"id": "coordinate-origin",
"text": {
"status": "generated",
"div": "<!-- snip (see above) -->"
},
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
"valueCode": "cg"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
"valueInteger": 0,
"_valueInteger": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
"valueCanonical": "http://hl7.org/fhir/uv/molecular-definition-data-types/ImplementationGuide/hl7.fhir.uv.molecular-definition-data-types"
}
]
}
},
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode": "draft",
"_valueCode": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
"valueCanonical": "http://hl7.org/fhir/uv/molecular-definition-data-types/ImplementationGuide/hl7.fhir.uv.molecular-definition-data-types"
}
]
}
}
],
"url": "http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/coordinate-origin",
"version": "1.0.0-ballot1",
"name": "CoordinateOrigin",
"title": "Coordinate Origin",
"status": "draft",
"experimental": false,
"date": "2025-07-16T20:39:35+00:00",
"publisher": "HL7 International / Clinical Genomics",
"contact": [
{
"name": "HL7 International / Clinical Genomics",
"telecom": [
{
"system": "url",
"value": "http://www.hl7.org/Special/committees/clingenomics"
},
{
"system": "email",
"value": "cg@lists.HL7.org"
}
]
}
],
"description": "Reference points for coordinate counting in molecular sequences",
"jurisdiction": [
{
"coding": [
{
"system": "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code": "001",
"display": "World"
}
]
}
],
"caseSensitive": true,
"content": "complete",
"count": 3,
"concept": [
{
"code": "sequence-start",
"display": "Sequence start",
"definition": "Counting begins at the start of the sequence - e.g., 5' end or N terminus"
},
{
"code": "feature-start",
"display": "Feature start",
"definition": "Counting begins at the start of a designated feature - e.g., translation initiation codon (A in ATG), exon"
},
{
"code": "feature-end",
"display": "Feature end",
"definition": "Counting begins at the end of a designated feature - e.g., exon (as offset into the following intron)"
}
]
}