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FHIR IG Statistics: CodeSystem/amino-acid-3letter-ambiguous

Packagehl7.fhir.uv.molecular-definition-data-types
TypeCodeSystem
Idamino-acid-3letter-ambiguous
FHIR VersionR6
Sourcehttp://hl7.org/fhir/uv/molecular-definition-data-types/https://build.fhir.org/ig/HL7/molecular-definition-data-types/CodeSystem-amino-acid-3letter-ambiguous.html
URLhttp://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/amino-acid-3letter-ambiguous
Version1.0.0-ballot1
Statusdraft
Date2025-07-22T19:59:05+00:00
NameAminoAcid3LetterAmbiguous
TitleAmino Acid 3-letter Ambiguous Symbols
Realmuv
Authorityhl7
DescriptionThree-letter symbols for amino acids, including ambiguous symbols.
Contentcomplete

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Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: CodeSystem amino-acid-3letter-ambiguous

This case-sensitive code system http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/amino-acid-3letter-ambiguous defines the following codes:

CodeDisplayDefinition
Ala AlanineAla
Asx Aspartic acid or asparagineAsp or Asn
Cys CysteineCys
Asp Aspartic acidAsp
Glu Glutamic acidGlu
Phe PhenylalaninePhe
Gly GlycineGly
His HistidineHis
Ile IsoleucineIle
Lys LysineLys
Leu LeucineLeu
Met MethionineMet
Asn AsparagineAsn
Pro ProlinePro
Gln GlutamineGln
Arg ArginineArg
Ser SerineSer
Thr ThreonineThr
Sec SelenocysteineSec
Val ValineVal
Trp TryptophanTrp
Xaa Unknown or other amino acidAny amino acid
Tyr TyrosineTyr
Glx Glutamic acid or glutamineGlu or Gln

Source

{
  "resourceType": "CodeSystem",
  "id": "amino-acid-3letter-ambiguous",
  "text": {
    "status": "generated",
    "div": "<!-- snip (see above) -->"
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
      "valueCode": "cg"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
      "valueInteger": 0,
      "_valueInteger": {
        "extension": [
          {
            "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
            "valueCanonical": "http://hl7.org/fhir/uv/molecular-definition-data-types/ImplementationGuide/hl7.fhir.uv.molecular-definition-data-types"
          }
        ]
      }
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
      "valueCode": "draft",
      "_valueCode": {
        "extension": [
          {
            "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
            "valueCanonical": "http://hl7.org/fhir/uv/molecular-definition-data-types/ImplementationGuide/hl7.fhir.uv.molecular-definition-data-types"
          }
        ]
      }
    }
  ],
  "url": "http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/amino-acid-3letter-ambiguous",
  "version": "1.0.0-ballot1",
  "name": "AminoAcid3LetterAmbiguous",
  "title": "Amino Acid 3-letter Ambiguous Symbols",
  "status": "draft",
  "experimental": false,
  "date": "2025-07-22T19:59:05+00:00",
  "publisher": "HL7 International / Clinical Genomics",
  "contact": [
    {
      "name": "HL7 International / Clinical Genomics",
      "telecom": [
        {
          "system": "url",
          "value": "http://www.hl7.org/Special/committees/clingenomics"
        },
        {
          "system": "email",
          "value": "cg@lists.HL7.org"
        }
      ]
    }
  ],
  "description": "Three-letter symbols for amino acids, including ambiguous symbols.",
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "http://unstats.un.org/unsd/methods/m49/m49.htm",
          "code": "001",
          "display": "World"
        }
      ]
    }
  ],
  "caseSensitive": true,
  "content": "complete",
  "count": 24,
  "concept": [
    {
      "code": "Ala",
      "display": "Alanine",
      "definition": "Ala"
    },
    {
      "code": "Asx",
      "display": "Aspartic acid or asparagine",
      "definition": "Asp or Asn"
    },
    {
      "code": "Cys",
      "display": "Cysteine",
      "definition": "Cys"
    },
    {
      "code": "Asp",
      "display": "Aspartic acid",
      "definition": "Asp"
    },
    {
      "code": "Glu",
      "display": "Glutamic acid",
      "definition": "Glu"
    },
    {
      "code": "Phe",
      "display": "Phenylalanine",
      "definition": "Phe"
    },
    {
      "code": "Gly",
      "display": "Glycine",
      "definition": "Gly"
    },
    {
      "code": "His",
      "display": "Histidine",
      "definition": "His"
    },
    {
      "code": "Ile",
      "display": "Isoleucine",
      "definition": "Ile"
    },
    {
      "code": "Lys",
      "display": "Lysine",
      "definition": "Lys"
    },
    {
      "code": "Leu",
      "display": "Leucine",
      "definition": "Leu"
    },
    {
      "code": "Met",
      "display": "Methionine",
      "definition": "Met"
    },
    {
      "code": "Asn",
      "display": "Asparagine",
      "definition": "Asn"
    },
    {
      "code": "Pro",
      "display": "Proline",
      "definition": "Pro"
    },
    {
      "code": "Gln",
      "display": "Glutamine",
      "definition": "Gln"
    },
    {
      "code": "Arg",
      "display": "Arginine",
      "definition": "Arg"
    },
    {
      "code": "Ser",
      "display": "Serine",
      "definition": "Ser"
    },
    {
      "code": "Thr",
      "display": "Threonine",
      "definition": "Thr"
    },
    {
      "code": "Sec",
      "display": "Selenocysteine",
      "definition": "Sec"
    },
    {
      "code": "Val",
      "display": "Valine",
      "definition": "Val"
    },
    {
      "code": "Trp",
      "display": "Tryptophan",
      "definition": "Trp"
    },
    {
      "code": "Xaa",
      "display": "Unknown or other amino acid",
      "definition": "Any amino acid"
    },
    {
      "code": "Tyr",
      "display": "Tyrosine",
      "definition": "Tyr"
    },
    {
      "code": "Glx",
      "display": "Glutamic acid or glutamine",
      "definition": "Glu or Gln"
    }
  ]
}