FHIR IG analytics| Package | hl7.fhir.uv.genomics-reporting.r4b |
| Resource Type | Observation |
| Id | Observation-PDL1Example.json |
| FHIR Version | R4B |
No resources found
No resources found
Note: links and images are rebased to the (stated) source
Generated Narrative: Observation PDL1Example
status: Final
category: Laboratory, A characterization of a given biomarker observation., Genetics
code: PD-L1 by clone 22C3 in Tissue by Immune stain Report
effective: 2023-02-01
performer: Practitioner Test Dolin
value: Positive
note: 5% tumor proportion score
component
code: A characterization of a given biomarker observation.
value: cell receptor ligand category
component
code: A characterization of a given biomarker observation.
value: immune stain category
component
code: Gene studied [ID]
value: CD274
{
"resourceType": "Observation",
"id": "PDL1Example",
"meta": {
"profile": [
"http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/molecular-biomarker"
]
},
"text": {
"status": "generated",
"div": "<!-- snip (see above) -->"
},
"status": "final",
"category": [
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/observation-category",
"code": "laboratory"
}
]
},
{
"coding": [
{
"system": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes-cs",
"code": "biomarker-category"
}
]
},
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/v2-0074",
"code": "GE"
}
]
}
],
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "85147-7",
"display": "PD-L1 by clone 22C3 in Tissue by Immune stain Report"
}
]
},
"subject": {
"reference": "Patient/somaticPatient"
},
"effectiveDateTime": "2023-02-01",
"performer": [
{
"reference": "Practitioner/pathologistPractitioner"
}
],
"valueCodeableConcept": {
"coding": [
{
"system": "http://loinc.org",
"code": "LA6576-8",
"display": "Positive"
}
]
},
"note": [
{
"text": "5% tumor proportion score"
}
],
"component": [
{
"code": {
"coding": [
{
"system": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes-cs",
"code": "biomarker-category"
}
]
},
"valueCodeableConcept": {
"coding": [
{
"system": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs",
"code": "cellReceptorLigand",
"display": "cell receptor ligand category"
}
]
}
},
{
"code": {
"coding": [
{
"system": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes-cs",
"code": "biomarker-category"
}
]
},
"valueCodeableConcept": {
"coding": [
{
"system": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs",
"code": "immuneStain",
"display": "immune stain category"
}
]
}
},
{
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "48018-6"
}
]
},
"valueCodeableConcept": {
"coding": [
{
"system": "http://www.genenames.org",
"code": "HGNC:17635",
"display": "CD274"
}
]
}
}
]
}