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FHIR IG analytics

Packagehl7.fhir.uv.genomics-reporting.r4
Resource TypeDiagnosticReport
IdDiagnosticReport-PGxGenomicReportEMERGE-withGrouping.json
FHIR VersionR4

Resources that use this resource

No resources found

Resources that this resource uses

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Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: DiagnosticReport PGxGenomicReportEMERGE-withGrouping

Genetic analysis report (Genetics)

SubjectAdam B. Everyman Male, DoB: 1951-01-20 ( Medical Record Number: m123 (use: usual, ))
When For2020-01-01 00:00:00-0500
Reported2020-01-01 00:00:00-0500
Performer Organization some lab

Report Details

CodeValueFlagsWhen For
GroupFinal2019-04-01
GroupFinal2019-04-01
GroupFinal2019-04-01

Source1

{
  "resourceType": "DiagnosticReport",
  "id": "PGxGenomicReportEMERGE-withGrouping",
  "meta": {
    "profile": [
      "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-report"
    ]
  },
  "text": {
    "status": "generated",
    "div": "<!-- snip (see above) -->"
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/recommended-action",
      "valueReference": {
        "reference": "Task/PGxRecEx01",
        "display": "No clopidogrel"
      }
    },
    {
      "url": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/recommended-action",
      "valueReference": {
        "reference": "Task/PGxRecEx02",
        "display": "No voriconazole"
      }
    },
    {
      "url": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/recommended-action",
      "valueReference": {
        "reference": "Task/PGxRecEx03",
        "display": "50% citalopram"
      }
    },
    {
      "url": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/recommended-action",
      "valueReference": {
        "reference": "Task/PGxRecEx04",
        "display": "50% escitalopram"
      }
    },
    {
      "url": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/recommended-action",
      "valueReference": {
        "reference": "Task/PGxRecEx04",
        "display": "50% amitriptyline"
      }
    }
  ],
  "basedOn": [
    {
      "reference": "ServiceRequest/eMERGEServiceRequest"
    }
  ],
  "status": "final",
  "category": [
    {
      "coding": [
        {
          "system": "http://terminology.hl7.org/CodeSystem/v2-0074",
          "code": "GE"
        }
      ]
    }
  ],
  "code": {
    "coding": [
      {
        "system": "http://loinc.org",
        "code": "51969-4"
      },
      {
        "system": "http://example.org/hgsc.bcm.edu/lab-test-codes/",
        "code": "emerge-seq-ngs-pnl"
      }
    ]
  },
  "subject": {
    "reference": "Patient/CGPatientExample01"
  },
  "effectiveDateTime": "2020-01-01T00:00:00-05:00",
  "issued": "2020-01-01T00:00:00-05:00",
  "performer": [
    {
      "reference": "Organization/ExampleOrg"
    }
  ],
  "result": [
    {
      "reference": "Observation/GrouperEx01",
      "display": "Therapeutic Implications"
    },
    {
      "reference": "Observation/GrouperEx02",
      "display": "Genotypes"
    },
    {
      "reference": "Observation/GrouperEx03",
      "display": "Regions studied and Variants"
    }
  ]
}