FHIR IG analytics

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Narrative

Note: links and images are rebased to the (stated) source

Source1

{
  "resourceType": "CodeSystem",
  "id": "clinvar-evidence-level-custom-cs",
  "text": {
    "status": "generated",
    "div": "<!-- snip (see above) -->"
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
      "valueCode": "cg"
    }
  ],
  "url": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/clinvar-evidence-level-custom-cs",
  "version": "3.0.0",
  "name": "ClinVarEvidenceLevelCustomCS",
  "title": "ClinVar Evidence Level Example Codes",
  "status": "active",
  "experimental": true,
  "date": "2024-12-12T21:16:09+00:00",
  "publisher": "HL7 International / Clinical Genomics",
  "contact": [
    {
      "name": "HL7 International / Clinical Genomics",
      "telecom": [
        {
          "system": "url",
          "value": "http://www.hl7.org/Special/committees/clingenomics"
        },
        {
          "system": "email",
          "value": "cg@lists.HL7.org"
        }
      ]
    }
  ],
  "description": "ClinVar contains examples of evidence level concepts that are not conflated with clinical significance. These can be found on  ClinVar https://www.ncbi.nlm.nih.gov/clinvar/docs/review_status/ . These examples are informational only, for copyright information contact the relevant source.",
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "http://unstats.un.org/unsd/methods/m49/m49.htm",
          "code": "001",
          "display": "World"
        }
      ]
    }
  ],
  "caseSensitive": true,
  "content": "complete",
  "count": 5,
  "concept": [
    {
      "code": "4-star",
      "display": "4 star",
      "definition": "Supported by practice guideline"
    },
    {
      "code": "3-star",
      "display": "3 star",
      "definition": "Supported by expert panel review"
    },
    {
      "code": "2-star",
      "display": "2 star",
      "definition": "Supported by submission by multiple-submitters with documentation of criteria for assertion"
    },
    {
      "code": "1-star",
      "display": "1 star",
      "definition": "Single submitter providing interpretation and documentation of criteria for assertion"
    },
    {
      "code": "no-star",
      "display": "no star",
      "definition": "submitted, no evidence"
    }
  ]
}