FHIR IG Statistics: ValueSet/molecular-biomarker-code-vs
Package | hl7.fhir.uv.genomics-reporting |
Type | ValueSet |
Id | molecular-biomarker-code-vs |
FHIR Version | R4 |
Source | http://hl7.org/fhir/uv/genomics-reporting/https://build.fhir.org/ig/HL7/genomics-reporting/ValueSet-molecular-biomarker-code-vs.html |
URL | http://hl7.org/fhir/uv/genomics-reporting/ValueSet/molecular-biomarker-code-vs |
Version | 4.0.0-ballot |
Status | active |
Date | 2025-06-24T17:31:37+00:00 |
Name | MolecularBiomarkerCodeVS |
Title | Molecular Biomarker Codes |
Realm | uv |
Authority | hl7 |
Description | Value Set for terms that can be used as Biomarkers. |
Copyright | This material contains content from LOINC (http://loinc.org). LOINC is copyright © 1995-2020, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee and is available at no cost under the license at http://loinc.org/license. LOINC® is a registered United States trademark of Regenstrief Institute, Inc.
This value set includes content from SNOMED CT, which is copyright © 2002+ International Health Terminology Standards Development Organisation (IHTSDO), and distributed by agreement between IHTSDO and HL7. Implementer use of SNOMED CT is not covered by this agreement. |
Resources that use this resource
Resources that this resource uses
Narrative
Note: links and images are rebased to the (stated) source
This value set includes codes based on the following rules:
- Include these codes as defined in
http://loinc.org
Code | Display |
85337-4 | Estrogen receptor Ag Immune stain Ql (Breast cancer specimen) |
72382-5 | HER2 IA Qn (Tiss) |
77637-7 | HLA-A and B and C (class I) IgG panel IA [Identifier] |
40557-1 | Progesterone receptor Ag Immune stain Ql (Tiss) |
85147-7 | PD-L1 by clone 22C3 Immune stain Doc (Tiss) |
59025-7 | Neutrophil Ab FC Qn (S) |
59003-4 | Lactoferrin Ab IA Qn (S) |
10495-0 | Insulin Ag Immune stain Ql (Tiss) |
16550-6 | Carbohydrates Nom (U) |
2569-2 | Lipids (S) [Mass/Vol] |
4551-8 | Hemoglobin A2 (Bld) [Mass fraction] |
19195-7 | Prostate specific Ag Qn |
64083-9 | MGMT gene methylation score Molgen (Tiss) [Ratio] |
62862-8 | Microsatellite instability Immune stain Ql (Tiss) |
81704-9 | Microsatellite instability marker D17S250 Ql (Cancer specimen) |
94077-5 | Tumor mutation burden Ql (Tumor) [Interp] |
- Include these codes as defined in
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl
Code | Display |
C120465 | Homologous Recombination Repair Deficiency |
Source
{
"resourceType": "ValueSet",
"id": "molecular-biomarker-code-vs",
"text": {
"status": "generated",
"div": "<!-- snip (see above) -->"
},
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
"valueCode": "cg"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
"valueInteger": 2,
"_valueInteger": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
"valueCanonical": "http://hl7.org/fhir/uv/genomics-reporting/ImplementationGuide/genomics-reporting"
}
]
}
},
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode": "trial-use",
"_valueCode": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
"valueCanonical": "http://hl7.org/fhir/uv/genomics-reporting/ImplementationGuide/genomics-reporting"
}
]
}
}
],
"url": "http://hl7.org/fhir/uv/genomics-reporting/ValueSet/molecular-biomarker-code-vs",
"version": "4.0.0-ballot",
"name": "MolecularBiomarkerCodeVS",
"title": "Molecular Biomarker Codes",
"status": "active",
"experimental": false,
"date": "2025-06-24T17:31:37+00:00",
"publisher": "HL7 International / Clinical Genomics",
"contact": [
{
"name": "HL7 International / Clinical Genomics",
"telecom": [
{
"system": "url",
"value": "http://www.hl7.org/Special/committees/clingenomics"
},
{
"system": "email",
"value": "cg@lists.HL7.org"
}
]
}
],
"description": "Value Set for terms that can be used as Biomarkers.",
"jurisdiction": [
{
"coding": [
{
"system": "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code": "001",
"display": "World"
}
]
}
],
"copyright": "This material contains content from LOINC (http://loinc.org). LOINC is copyright © 1995-2020, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee and is available at no cost under the license at http://loinc.org/license. LOINC® is a registered United States trademark of Regenstrief Institute, Inc.\nThis value set includes content from SNOMED CT, which is copyright © 2002+ International Health Terminology Standards Development Organisation (IHTSDO), and distributed by agreement between IHTSDO and HL7. Implementer use of SNOMED CT is not covered by this agreement.",
"compose": {
"include": [
{
"system": "http://loinc.org",
"concept": [
{
"code": "85337-4",
"display": "Estrogen receptor Ag Immune stain Ql (Breast cancer specimen)"
},
{
"code": "72382-5",
"display": "HER2 IA Qn (Tiss)"
},
{
"code": "77637-7",
"display": "HLA-A and B and C (class I) IgG panel IA [Identifier]"
},
{
"code": "40557-1",
"display": "Progesterone receptor Ag Immune stain Ql (Tiss)"
},
{
"code": "85147-7",
"display": "PD-L1 by clone 22C3 Immune stain Doc (Tiss)"
},
{
"code": "59025-7",
"display": "Neutrophil Ab FC Qn (S)"
},
{
"code": "59003-4",
"display": "Lactoferrin Ab IA Qn (S)"
},
{
"code": "10495-0",
"display": "Insulin Ag Immune stain Ql (Tiss)"
},
{
"code": "16550-6",
"display": "Carbohydrates Nom (U)"
},
{
"code": "2569-2",
"display": "Lipids (S) [Mass/Vol]"
},
{
"code": "4551-8",
"display": "Hemoglobin A2 (Bld) [Mass fraction]"
},
{
"code": "19195-7",
"display": "Prostate specific Ag Qn"
},
{
"code": "64083-9",
"display": "MGMT gene methylation score Molgen (Tiss) [Ratio]"
},
{
"code": "62862-8",
"display": "Microsatellite instability Immune stain Ql (Tiss)"
},
{
"code": "81704-9",
"display": "Microsatellite instability marker D17S250 Ql (Cancer specimen)"
},
{
"code": "94077-5",
"display": "Tumor mutation burden Ql (Tumor) [Interp]"
}
]
},
{
"system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl",
"concept": [
{
"code": "C120465",
"display": "Homologous Recombination Repair Deficiency"
}
]
}
]
}
}