FHIR IG analytics
| Package | hl7.fhir.uv.genomics-reporting |
| Resource Type | ValueSet |
| Id | ValueSet-molecular-biomarker-code-vs.json |
| FHIR Version | R4 |
| Source | https://build.fhir.org/ig/HL7/genomics-reporting/ValueSet-molecular-biomarker-code-vs.html |
| URL | http://hl7.org/fhir/uv/genomics-reporting/ValueSet/molecular-biomarker-code-vs |
| Version | 4.0.0-cibuild |
| Status | active |
| Date | 2026-01-30T18:21:39+00:00 |
| Name | MolecularBiomarkerCodeVS |
| Title | Molecular Biomarker Codes |
| Realm | uv |
| Authority | hl7 |
| Description | Value Set for terms that can be used as Biomarkers. |
| Copyright | This material contains content from LOINC (http://loinc.org). LOINC is copyright © 1995-2020, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee and is available at no cost under the license at http://loinc.org/license. LOINC® is a registered United States trademark of Regenstrief Institute, Inc.
This value set includes content from SNOMED CT, which is copyright © 2002+ International Health Terminology Standards Development Organisation (IHTSDO), and distributed by agreement between IHTSDO and HL7. Implementer use of SNOMED CT is not covered by this agreement. |
Resources that use this resource
Resources that this resource uses
Narrative
Note: links and images are rebased to the (stated) source
This value set includes codes based on the following rules:
- Include these codes as defined in
http://loinc.org version Not Stated (use latest from terminology server)| Code | Display |
| 85337-4 | Estrogen receptor Ag [Presence] in Breast cancer specimen by Immune stain |
| 72382-5 | HER2 [Units/volume] in Tissue by Immunoassay |
| 77637-7 | HLA-A and B and C (class I) IgG panel [Identifier] - Serum or Plasma by Immunoassay |
| 40557-1 | Progesterone receptor Ag [Presence] in Tissue by Immune stain |
| 85147-7 | PD-L1 by clone 22C3 in Tissue by Immune stain Report |
| 59025-7 | Neutrophil Ab [Units/volume] in Serum by Flow cytometry (FC) |
| 59003-4 | Lactoferrin Ab [Units/volume] in Serum by Immunoassay |
| 10495-0 | Insulin Ag [Presence] in Tissue by Immune stain |
| 16550-6 | Carbohydrates [Identifier] in Urine |
| 2569-2 | Lipids [Mass/volume] in Serum |
| 4551-8 | Hemoglobin A2/Hemoglobin.total in Blood |
| 19195-7 | Prostate specific Ag [Units/volume] in Serum or Plasma |
| 64083-9 | MGMT gene methylation score in Tissue by Molecular genetics method |
| 62862-8 | Microsatellite instability [Presence] in Tissue by Immune stain |
| 81704-9 | Microsatellite instability marker D17S250 in Cancer specimen Qualitative |
| 94077-5 | Tumor mutation burden [Interpretation] |
- Include these codes as defined in
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl version ∅| Code | Display |
| C120465 | Homologous Recombination Repair Deficiency |
Source1
{
"resourceType": "ValueSet",
"id": "molecular-biomarker-code-vs",
"text": {
"status": "generated",
"div": "<!-- snip (see above) -->"
},
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
"valueCode": "cg"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
"valueInteger": 2,
"_valueInteger": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
"valueCanonical": "http://hl7.org/fhir/uv/genomics-reporting/ImplementationGuide/genomics-reporting"
}
]
}
},
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode": "trial-use",
"_valueCode": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
"valueCanonical": "http://hl7.org/fhir/uv/genomics-reporting/ImplementationGuide/genomics-reporting"
}
]
}
}
],
"url": "http://hl7.org/fhir/uv/genomics-reporting/ValueSet/molecular-biomarker-code-vs",
"version": "4.0.0-cibuild",
"name": "MolecularBiomarkerCodeVS",
"title": "Molecular Biomarker Codes",
"status": "active",
"experimental": false,
"date": "2026-01-30T18:21:39+00:00",
"publisher": "HL7 International / Clinical Genomics",
"contact": [
{
"name": "HL7 International / Clinical Genomics",
"telecom": [
{
"system": "url",
"value": "http://www.hl7.org/Special/committees/clingenomics"
},
{
"system": "email",
"value": "cg@lists.HL7.org"
}
]
}
],
"description": "Value Set for terms that can be used as Biomarkers.",
"jurisdiction": [
{
"coding": [
{
"system": "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code": "001",
"display": "World"
}
]
}
],
"copyright": "This material contains content from LOINC (http://loinc.org). LOINC is copyright © 1995-2020, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee and is available at no cost under the license at http://loinc.org/license. LOINC® is a registered United States trademark of Regenstrief Institute, Inc.\nThis value set includes content from SNOMED CT, which is copyright © 2002+ International Health Terminology Standards Development Organisation (IHTSDO), and distributed by agreement between IHTSDO and HL7. Implementer use of SNOMED CT is not covered by this agreement.",
"compose": {
"include": [
{
"system": "http://loinc.org",
"concept": [
{
"code": "85337-4",
"display": "Estrogen receptor Ag [Presence] in Breast cancer specimen by Immune stain"
},
{
"code": "72382-5",
"display": "HER2 [Units/volume] in Tissue by Immunoassay"
},
{
"code": "77637-7",
"display": "HLA-A and B and C (class I) IgG panel [Identifier] - Serum or Plasma by Immunoassay"
},
{
"code": "40557-1",
"display": "Progesterone receptor Ag [Presence] in Tissue by Immune stain"
},
{
"code": "85147-7",
"display": "PD-L1 by clone 22C3 in Tissue by Immune stain Report"
},
{
"code": "59025-7",
"display": "Neutrophil Ab [Units/volume] in Serum by Flow cytometry (FC)"
},
{
"code": "59003-4",
"display": "Lactoferrin Ab [Units/volume] in Serum by Immunoassay"
},
{
"code": "10495-0",
"display": "Insulin Ag [Presence] in Tissue by Immune stain"
},
{
"code": "16550-6",
"display": "Carbohydrates [Identifier] in Urine"
},
{
"code": "2569-2",
"display": "Lipids [Mass/volume] in Serum"
},
{
"code": "4551-8",
"display": "Hemoglobin A2/Hemoglobin.total in Blood"
},
{
"code": "19195-7",
"display": "Prostate specific Ag [Units/volume] in Serum or Plasma"
},
{
"code": "64083-9",
"display": "MGMT gene methylation score in Tissue by Molecular genetics method"
},
{
"code": "62862-8",
"display": "Microsatellite instability [Presence] in Tissue by Immune stain"
},
{
"code": "81704-9",
"display": "Microsatellite instability marker D17S250 in Cancer specimen Qualitative"
},
{
"code": "94077-5",
"display": "Tumor mutation burden [Interpretation]"
}
]
},
{
"system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl",
"concept": [
{
"code": "C120465",
"display": "Homologous Recombination Repair Deficiency"
}
]
}
]
}
}