FHIR IG analytics| Package | hl7.fhir.uv.ebm-incubator |
| Resource Type | Citation |
| Id | Citation-citation-example-research-doi.json |
| FHIR Version | R6 |
No resources found
No resources found
Note: links and images are rebased to the (stated) source
Generated Narrative: Citation citation-example-research-doi
Language: en
identifier: FEvIR Object Identifier/60, Uniform Resource Identifier (URI)/urn:oid:2.16.840.1.113883.4.642.8.6
name: NInFEACitation
title: NInFEA Citation
status: Active
date: 2021-09-24 10:41:01+0000
publisher: Computable Publishing LLC
contact: support@computablepublishing.com
description:
A citation of a dataset
copyright:
https://creativecommons.org/licenses/by-nc-sa/4.0/
summary
style: as reported on PhysioNet
text:
Pani, D., Sulas, E., Urru, M., Sameni, R., Raffo, L., & Tumbarello, R. (2020). NInFEA: Non-Invasive Multimodal Foetal ECG-Doppler Dataset for Antenatal Cardiology Research (version 1.0.0). PhysioNet. https://doi.org/10.13026/c4n5-3b04.
summary
style: Computable Publishing
text:
NInFEA: Non-Invasive Multimodal Foetal ECG-Doppler Dataset for Antenatal Cardiology Research [Dataset], version 1.0.0. Contributors: Danilo Pani, Eleonora Sulas, Monica Urru, Reza Sameni, Luigi Raffo, Roberto Tumbarello. In: PhysioNet, DOI 10.13026/c4n5-3b04. Published November 12, 2020. Accessed March 17, 2021. Available at: https://physionet.org/content/ninfea/1.0.0/.
citedArtifact
identifier:
https://doi.org/10.13026/c4n5-3b04relatedIdentifier:
https://doi.org/10.1038/s41597-021-00811-3dateAccessed: 2021-03-17
version: 1.0.0
Titles
Type Language Text primary-human-use English NInFEA: Non-Invasive Multimodal Foetal ECG-Doppler Dataset for Antenatal Cardiology Research
Abstracts
Type Language Text Primary human use English The development of algorithms for the extraction of the foetal ECG (fECG) from non-invasive recordings is hampered by the lack of publicly-available reference datasets, which could be used to benchmark different algorithms while providing a ground truth on the foetal heart activity when an invasive scalp lead is unavailable. By enriching the electrophysiological recordings with simultaneous multimodal signals, these datasets could also help the investigation of the foetal cardiac physiology, providing ground truth for the analysis in early pregnancy, when the fECG is not directly accessible. The Non-Invasive Multimodal Foetal ECG-Doppler Dataset for Antenatal Cardiology Research (NInFEA) is the first open-access dataset featuring simultaneous non-invasive electrophysiological recordings, fetal pulsed-wave Doppler (PWD) and maternal respiration signals. The dataset includes 60 entries from 39 voluntary pregnant women, between the 21st and the 27th week of gestation. Every entry is composed of 27 electrophysiological channels (2048 Hz, 22 bits, acquired by means of the TMSi Porti7 system), maternal respiration signal (through a resistive thoracic belt), synchronised foetal trans-abdominal PWD and clinical annotations provided by expert clinicians at the time of the signal collection.
relatesTo
type: Derived From
classifier: original publication
citation:
Sulas, E., Urru, M., Tumbarello, R., Raffo, L., Sameni, R., Pani, D., A non-invasive multimodal foetal ECG–Doppler dataset for antenatal cardiology research. Sci Data 8, 30 (2021). https://doi.org/10.1038/s41597-021-00811-3
relatesTo
type: Depends On
classifier: ontology
display: Experimental Factor Ontology
publicationForm
PublishedIns
Type Title Publisher Database PhysioNet MIT Laboratory for Computational Physiology articleDate: 2020-11-12
language: English
copyright:
https://physionet.org/content/ninfea/view-license/1.0.0/ and https://physionet.org/content/ninfea/1.0.0/LICENSE.txt
webLocation
classifier: Webpage
webLocation
classifier: DOI Based
webLocation
classifier: original publication
webLocation
classifier: Compressed file
webLocation
classifier: DOI-for-metadata
classification
classifier: Knowledge Artifact Type, Dataset
classification
type: topic
classifier: ecg
classification
type: topic
classifier: foetus
classification
type: topic
classifier: pwd
classification
type: topic
classifier: doppler
classification
type: topic
classifier: foetal ecg
classification
type: topic
classifier: maternal ecg
classification
type: topic
classifier: pwd envelope
classification
type: topic
classifier: non-invasive
classification
type: topic
classifier: cardiology
classification
type: topic
classifier: early pregnancy
classification
type: topic
classifier: antenatal
classification
type: topic
classifier: fecg
classification
type: subject type
classifier: Homo sapiens
classification
type: use context
classifier: gestational age
classification
type: use context
classifier: electrocardiography
classification
type: use context
classifier: heart electrical impulse conduction trait
contributorship
summary
type: Author string
source: copied-from-article
value:
Danilo Pani, Eleonora Sulas, Monica Urru, Reza Sameni, Luigi Raffo, Roberto Tumbarello
summary
type: acknowledgements
source: copied-from-article
value:
The authors wish to thank the Pediatric Cardiology and Congenital Heart Disease Unit, Brotzu Hospital (Cagliari, Italy), where the dataset was collected, and all the voluntary pregnant women for their kindness in giving their signals for this research. The authors gratefully thank Alessandra Cadoni, Graziella Secchi, Luisa Aru, Elisa Farris, Chiara Fenu, Elisa Gusai, Giulia Baldazzi, Giulia Pili for their support in the recording of the signals included in this dataset. Part of this research was supported by the Italian Government—Progetti di InteresseNazionale (PRIN) under the grant agreement 2017RR5EW3 - ICT4MOMs project. Eleonora Sulas is grateful to Sardinia Regional Government for supporting her PhD scholarship (P.O.R.F.S.E., European Social Fund 2014-2020). Reza Sameni acknowledges the funding from the European Research Council Advanced Grant Number 320684, on Challenges in the Extraction and Separation of Sources (CHESS) for his contribution in this research, provided during his appointment at GIPSA-lab, Grenoble Alpes University, Grenoble, France.
{
"resourceType": "Citation",
"resourceDefinition": "http://hl7.org/fhir/uv/ebm-incubator/StructureDefinition/Citation|1.0.0-ballot",
"id": "citation-example-research-doi",
"language": "en",
"text": {
"status": "generated",
"div": "<!-- snip (see above) -->"
},
"identifier": [
{
"type": {
"text": "FEvIR Object Identifier"
},
"system": "https://fevir.net/FOI",
"value": "60",
"assigner": {
"display": "Computable Publishing LLC"
}
},
{
"system": "urn:ietf:rfc:3986",
"value": "urn:oid:2.16.840.1.113883.4.642.8.6"
}
],
"name": "NInFEACitation",
"title": "NInFEA Citation",
"status": "active",
"date": "2021-09-24T10:41:01.740Z",
"publisher": "Computable Publishing LLC",
"contact": [
{
"telecom": [
{
"system": "email",
"value": "support@computablepublishing.com"
}
]
}
],
"description": "A citation of a dataset",
"copyright": "https://creativecommons.org/licenses/by-nc-sa/4.0/",
"summary": [
{
"style": {
"text": "as reported on PhysioNet"
},
"text": "Pani, D., Sulas, E., Urru, M., Sameni, R., Raffo, L., & Tumbarello, R. (2020). NInFEA: Non-Invasive Multimodal Foetal ECG-Doppler Dataset for Antenatal Cardiology Research (version 1.0.0). PhysioNet. https://doi.org/10.13026/c4n5-3b04."
},
{
"style": {
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/citation-summary-style",
"code": "comppub",
"display": "Computable Publishing"
}
]
},
"text": "NInFEA: Non-Invasive Multimodal Foetal ECG-Doppler Dataset for Antenatal Cardiology Research [Dataset], version 1.0.0. Contributors: Danilo Pani, Eleonora Sulas, Monica Urru, Reza Sameni, Luigi Raffo, Roberto Tumbarello. In: PhysioNet, DOI 10.13026/c4n5-3b04. Published November 12, 2020. Accessed March 17, 2021. Available at: https://physionet.org/content/ninfea/1.0.0/."
}
],
"citedArtifact": {
"identifier": [
{
"system": "https://doi.org",
"value": "10.13026/c4n5-3b04"
}
],
"relatedIdentifier": [
{
"system": "https://doi.org",
"value": "10.1038/s41597-021-00811-3"
}
],
"dateAccessed": "2021-03-17",
"version": "1.0.0",
"title": [
{
"type": [
{
"text": "primary-human-use"
}
],
"language": "en",
"text": "NInFEA: Non-Invasive Multimodal Foetal ECG-Doppler Dataset for Antenatal Cardiology Research"
}
],
"abstract": [
{
"type": [
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/cited-artifact-abstract-type",
"code": "primary-human-use",
"display": "Primary human use"
}
]
}
],
"language": "en",
"text": "The development of algorithms for the extraction of the foetal ECG (fECG) from non-invasive recordings is hampered by the lack of publicly-available reference datasets, which could be used to benchmark different algorithms while providing a ground truth on the foetal heart activity when an invasive scalp lead is unavailable. By enriching the electrophysiological recordings with simultaneous multimodal signals, these datasets could also help the investigation of the foetal cardiac physiology, providing ground truth for the analysis in early pregnancy, when the fECG is not directly accessible. The Non-Invasive Multimodal Foetal ECG-Doppler Dataset for Antenatal Cardiology Research (NInFEA) is the first open-access dataset featuring simultaneous non-invasive electrophysiological recordings, fetal pulsed-wave Doppler (PWD) and maternal respiration signals. The dataset includes 60 entries from 39 voluntary pregnant women, between the 21st and the 27th week of gestation. Every entry is composed of 27 electrophysiological channels (2048 Hz, 22 bits, acquired by means of the TMSi Porti7 system), maternal respiration signal (through a resistive thoracic belt), synchronised foetal trans-abdominal PWD and clinical annotations provided by expert clinicians at the time of the signal collection."
}
],
"relatesTo": [
{
"type": {
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/artifact-relationship-type",
"code": "derived-from",
"display": "Derived From"
}
]
},
"classifier": [
{
"text": "original publication"
}
],
"citation": "Sulas, E., Urru, M., Tumbarello, R., Raffo, L., Sameni, R., Pani, D., A non-invasive multimodal foetal ECG–Doppler dataset for antenatal cardiology research. Sci Data 8, 30 (2021). https://doi.org/10.1038/s41597-021-00811-3",
"targetUri": "https://doi.org/10.1038/s41597-021-00811-3"
},
{
"type": {
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/artifact-relationship-type",
"code": "depends-on",
"display": "Depends On"
}
]
},
"classifier": [
{
"text": "ontology"
}
],
"display": "Experimental Factor Ontology",
"targetUri": "http://data.bioontology.org/ontologies/EFO"
}
],
"publicationForm": [
{
"publishedIn": {
"type": {
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/published-in-type",
"version": "1.0.0",
"code": "D019991",
"display": "Database"
}
]
},
"title": "PhysioNet",
"publisher": {
"display": "MIT Laboratory for Computational Physiology"
}
},
"articleDate": "2020-11-12",
"language": [
"en"
],
"copyright": "https://physionet.org/content/ninfea/view-license/1.0.0/ and https://physionet.org/content/ninfea/1.0.0/LICENSE.txt"
}
],
"webLocation": [
{
"classifier": [
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/artifact-url-classifier",
"version": "1.0.0",
"code": "webpage",
"display": "Webpage"
}
]
}
],
"url": "https://physionet.org/content/ninfea/1.0.0/"
},
{
"classifier": [
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/artifact-url-classifier",
"version": "1.0.0",
"code": "doi-based",
"display": "DOI Based"
}
]
}
],
"url": "https://doi.org/10.13026/c4n5-3b04"
},
{
"classifier": [
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/artifact-url-classifier",
"version": "1.0.0",
"code": "doi-based",
"display": "DOI Based"
}
],
"text": "original publication"
}
],
"url": "https://doi.org/10.1038/s41597-021-00811-3"
},
{
"classifier": [
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/artifact-url-classifier",
"version": "1.0.0",
"code": "compressed-file",
"display": "Compressed file"
}
]
}
],
"url": "https://physionet.org/static/published-projects/ninfea/ninfea-non-invasive-multimodal-foetal-ecg-doppler-dataset-for-antenatal-cardiology-research-1.0.0.zip"
},
{
"classifier": [
{
"text": "DOI-for-metadata"
}
],
"url": "https://doi.org/10.6084/m9.figshare.13283492"
}
],
"classification": [
{
"classifier": [
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/cited-artifact-classification-type",
"code": "knowledge-artifact-type",
"display": "Knowledge Artifact Type"
}
]
},
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/citation-artifact-classifier",
"code": "D064886",
"display": "Dataset"
}
]
}
]
},
{
"type": {
"text": "topic"
},
"classifier": [
{
"coding": [
{
"system": "http://www.ebi.ac.uk/efo",
"code": "EFO_0004327",
"display": "electrocardiography"
}
],
"text": "ecg"
}
]
},
{
"type": {
"text": "topic"
},
"classifier": [
{
"coding": [
{
"system": "http://purl.obolibrary.org/obo",
"code": "FMA_63919",
"display": "foetus"
}
],
"text": "foetus"
}
]
},
{
"type": {
"text": "topic"
},
"classifier": [
{
"text": "pwd"
}
]
},
{
"type": {
"text": "topic"
},
"classifier": [
{
"text": "doppler"
}
]
},
{
"type": {
"text": "topic"
},
"classifier": [
{
"text": "foetal ecg"
}
]
},
{
"type": {
"text": "topic"
},
"classifier": [
{
"text": "maternal ecg"
}
]
},
{
"type": {
"text": "topic"
},
"classifier": [
{
"text": "pwd envelope"
}
]
},
{
"type": {
"text": "topic"
},
"classifier": [
{
"text": "non-invasive"
}
]
},
{
"type": {
"text": "topic"
},
"classifier": [
{
"coding": [
{
"system": "http://snomed.info/sct",
"code": "394579002",
"display": "Cardiology (qualifier value)"
}
],
"text": "cardiology"
}
]
},
{
"type": {
"text": "topic"
},
"classifier": [
{
"coding": [
{
"system": "http://snomed.info/sct",
"code": "314204000",
"display": "Early stage of pregnancy (finding)"
}
],
"text": "early pregnancy"
}
]
},
{
"type": {
"text": "topic"
},
"classifier": [
{
"text": "antenatal"
}
]
},
{
"type": {
"text": "topic"
},
"classifier": [
{
"coding": [
{
"system": "http://snomed.info/sct",
"code": "75444003",
"display": "Fetal electrocardiogram (procedure)"
}
],
"text": "fecg"
}
]
},
{
"type": {
"text": "subject type"
},
"classifier": [
{
"coding": [
{
"system": "http://purl.bioontology.org/ontology/NCBITAXON",
"code": "9606",
"display": "Homo sapiens"
}
]
}
]
},
{
"type": {
"text": "use context"
},
"classifier": [
{
"coding": [
{
"system": "http://www.ebi.ac.uk/efo",
"code": "EFO_0005112",
"display": "gestational age"
}
]
}
]
},
{
"type": {
"text": "use context"
},
"classifier": [
{
"coding": [
{
"system": "http://www.ebi.ac.uk/efo",
"code": "EFO_0004327",
"display": "electrocardiography"
}
]
}
]
},
{
"type": {
"text": "use context"
},
"classifier": [
{
"coding": [
{
"system": "http://purl.obolibrary.org/obo",
"code": "VT_2000017",
"display": "heart electrical impulse conduction trait"
}
]
}
]
}
],
"contributorship": {
"summary": [
{
"type": {
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/contributor-summary-type",
"version": "1.0.0",
"code": "author-string",
"display": "Author string"
}
]
},
"source": {
"text": "copied-from-article"
},
"value": "Danilo Pani, Eleonora Sulas, Monica Urru, Reza Sameni, Luigi Raffo, Roberto Tumbarello"
},
{
"type": {
"text": "acknowledgements"
},
"source": {
"text": "copied-from-article"
},
"value": "The authors wish to thank the Pediatric Cardiology and Congenital Heart Disease Unit, Brotzu Hospital (Cagliari, Italy), where the dataset was collected, and all the voluntary pregnant women for their kindness in giving their signals for this research. The authors gratefully thank Alessandra Cadoni, Graziella Secchi, Luisa Aru, Elisa Farris, Chiara Fenu, Elisa Gusai, Giulia Baldazzi, Giulia Pili for their support in the recording of the signals included in this dataset. Part of this research was supported by the Italian Government—Progetti di InteresseNazionale (PRIN) under the grant agreement 2017RR5EW3 - ICT4MOMs project. Eleonora Sulas is grateful to Sardinia Regional Government for supporting her PhD scholarship (P.O.R.F.S.E., European Social Fund 2014-2020). Reza Sameni acknowledges the funding from the European Research Council Advanced Grant Number 320684, on Challenges in the Extraction and Separation of Sources (CHESS) for his contribution in this research, provided during his appointment at GIPSA-lab, Grenoble Alpes University, Grenoble, France."
}
]
}
}
}