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Packagehl7.fhir.uv.cg-incubator
Resource TypeCodeSystem
IdCodeSystem-genomicstudy-changetype.json
FHIR VersionR6
Sourcehttps://build.fhir.org/ig/HL7/cg-incubator/CodeSystem-genomicstudy-changetype.html
URLhttp://hl7.org/fhir/genomicstudy-changetype
Version0.1.0
Statusdraft
Date2022-08-17T15:48:24-05:00
NameGenomicStudyChangeType
TitleGenomic Study Change Type
Realmuv
Authorityhl7
DescriptionThe change type relevant to GenomicStudy analysis.
Contentcomplete

Resources that use this resource

ValueSet
genomicstudy-changetype-vsGenomic Study Change Type VS
R5-genomicstudy-changetype-for-R4BCross-version VS for R5.GenomicStudyChangeType for use in FHIR R4B
R5-genomicstudy-changetype-for-R4Cross-version VS for R5.GenomicStudyChangeType for use in FHIR R4

Resources that this resource uses

No resources found


Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: CodeSystem genomicstudy-changetype

Last updated: 2022-08-17 15:47:24-0500

Profile: Shareable CodeSystem

This case-sensitive code system http://hl7.org/fhir/genomicstudy-changetype defines the following codes:

CodeDisplayDefinition
DNA DNA changeChange that involves Deoxyribonucleic acid (DNA) sequences.
RNA RNA changeChange that involves Ribonucleic Acid (RNA) sequences.
AA Protein/amino Acids change Change that involves Amino Acid (AA) or protein sequences.
CHR Chromosomal changesChange that involves number or strcture of chromosomes.
CNV Copy number variationsChange that involves copy number variations among various genomes.

Source1

{
  "resourceType": "CodeSystem",
  "id": "genomicstudy-changetype",
  "meta": {
    "lastUpdated": "2022-08-17T15:47:24.148-05:00",
    "profile": [
      "http://hl7.org/fhir/StructureDefinition/shareablecodesystem"
    ]
  },
  "text": {
    "status": "generated",
    "div": "<!-- snip (see above) -->"
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
      "valueCode": "cg"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
      "valueCode": "trial-use"
    },
    {
      "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
      "valueInteger": 1
    }
  ],
  "url": "http://hl7.org/fhir/genomicstudy-changetype",
  "identifier": [
    {
      "system": "urn:ietf:rfc:3986",
      "value": "urn:oid:2.16.840.1.113883.4.642.4.1977"
    }
  ],
  "version": "0.1.0",
  "name": "GenomicStudyChangeType",
  "title": "Genomic Study Change Type",
  "status": "draft",
  "experimental": true,
  "date": "2022-08-17T15:48:24-05:00",
  "publisher": "HL7 International / Clinical Genomics",
  "contact": [
    {
      "name": "HL7 International / Clinical Genomics",
      "telecom": [
        {
          "system": "url",
          "value": "http://www.hl7.org/Special/committees/cg"
        },
        {
          "system": "email",
          "value": "clingenomics@lists.hl7.org"
        }
      ]
    }
  ],
  "description": "The change type relevant to GenomicStudy analysis.",
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "http://unstats.un.org/unsd/methods/m49/m49.htm",
          "code": "001",
          "display": "World"
        }
      ]
    }
  ],
  "caseSensitive": true,
  "valueSet": "http://hl7.org/fhir/ValueSet/genomicstudy-changetype",
  "content": "complete",
  "concept": [
    {
      "code": "DNA",
      "display": "DNA change",
      "definition": "Change that involves Deoxyribonucleic acid (DNA) sequences."
    },
    {
      "code": "RNA",
      "display": "RNA change",
      "definition": "Change that involves Ribonucleic Acid (RNA) sequences."
    },
    {
      "code": "AA",
      "display": "Protein/amino Acids change ",
      "definition": "Change that involves Amino Acid (AA) or protein sequences."
    },
    {
      "code": "CHR",
      "display": "Chromosomal changes",
      "definition": "Change that involves number or strcture of chromosomes."
    },
    {
      "code": "CNV",
      "display": "Copy number variations",
      "definition": "Change that involves copy number variations among various genomes."
    }
  ]
}