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FHIR IG analytics

Packagehl7.fhir.us.mcode.r4b
Resource TypeDiagnosticReport
IdDiagnosticReport-gx-genomics-report-adam-anyperson.json
FHIR VersionR4B

Resources that use this resource

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Resources that this resource uses

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Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: DiagnosticReport gx-genomics-report-adam-anyperson

Genetic analysis report (Genetics)

SubjectAdam Anyperson Male, DoB: 1990-01-01 ( Medical Record Number: 123456789)
When For2022-02-15 19:28:58+0500
Performer Organization Gensop Labs, Inc.

Report Details

CodeValueFlagsWhen For
Genetic variant assessmentPresentFinal2019-04-01
Genetic variant assessmentPresentFinal2019-04-01
Genetic variant assessmentPresentFinal2019-04-01
Genetic variant assessmentPresentFinal2019-04-01
Genetic variant assessmentPresentFinal2019-04-01
Genetic variant assessmentPresentFinal2019-04-01
Genetic variant assessmentPresentFinal2019-04-01
Genetic variant assessmentPresentFinal2019-04-01
Diagnostic ImplicationFinal2019-04-01
Diagnostic ImplicationFinal2019-04-01
Diagnostic ImplicationFinal2019-04-01
Genetic variant assessmentPresentFinal2019-04-01
Genetic variant assessmentAbsentFinal2019-04-01
Mutations/Megabase [# Ratio] in Tumor57.1 1/1000000{Base} (Details: UCUM code1/1000000{Base} = '1/1000000{Base}')Final2019-04-01
Microsatellite instability [Interpretation] in Cancer specimen QualitativeMSI-HFinal2019-04-01
Therapeutic ImplicationFinal2019-04-01
Therapeutic ImplicationFinal2019-04-01
Therapeutic ImplicationFinal2019-04-01
Therapeutic ImplicationFinal2019-04-01
Therapeutic ImplicationFinal2019-04-01

Source1

{
  "resourceType": "DiagnosticReport",
  "id": "gx-genomics-report-adam-anyperson",
  "meta": {
    "profile": [
      "http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-genomics-report"
    ]
  },
  "text": {
    "status": "generated",
    "div": "<!-- snip (see above) -->"
  },
  "basedOn": [
    {
      "reference": "ServiceRequest/gx-order-tumornormal-gensop-inc"
    }
  ],
  "status": "final",
  "category": [
    {
      "coding": [
        {
          "system": "http://terminology.hl7.org/CodeSystem/v2-0074",
          "code": "GE"
        }
      ]
    }
  ],
  "code": {
    "coding": [
      {
        "system": "http://loinc.org",
        "code": "51969-4",
        "display": "Genetic analysis report"
      }
    ]
  },
  "subject": {
    "reference": "Patient/gx-cancer-patient-adam-anyperson"
  },
  "effectiveDateTime": "2022-02-15T19:28:58+05:00",
  "performer": [
    {
      "reference": "Organization/gx-us-core-organization-gensop-inc"
    }
  ],
  "resultsInterpreter": [
    {
      "reference": "Practitioner/gx-practitioner-test-pathologist"
    }
  ],
  "specimen": [
    {
      "reference": "Specimen/gx-genomic-specimen-tumornormal-tumor"
    },
    {
      "reference": "Specimen/gx-genomic-specimen-tumornormal-normal"
    }
  ],
  "result": [
    {
      "reference": "Observation/gx-genomic-variant-somatic-bap1-indel"
    },
    {
      "reference": "Observation/gx-genomic-variant-somatic-cdkn2a-cnv"
    },
    {
      "reference": "Observation/gx-genomic-variant-somatic-cdkn2b-cnv"
    },
    {
      "reference": "Observation/gx-genomic-variant-somatic-kdm5d"
    },
    {
      "reference": "Observation/gx-genomic-variant-somatic-mtap"
    },
    {
      "reference": "Observation/gx-genomic-variant-somatic-mycn"
    },
    {
      "reference": "Observation/gx-genomic-variant-somatic-pof1b"
    },
    {
      "reference": "Observation/gx-genomic-variant-somatic-polrmt"
    },
    {
      "reference": "Observation/gx-genomic-diagnostic-implication-bap1"
    },
    {
      "reference": "Observation/gx-genomic-diagnostic-implication-pof1b"
    },
    {
      "reference": "Observation/gx-genomic-diagnostic-implication-polrmt"
    },
    {
      "reference": "Observation/gx-genomic-variant-fusion-met-alk"
    },
    {
      "reference": "Observation/gx-genomic-variant-pertinent-negative-nras-kit-braf"
    },
    {
      "reference": "Observation/gx-genomic-tmb"
    },
    {
      "reference": "Observation/gx-genomic-msi"
    },
    {
      "reference": "Observation/gx-genomic-therapeutic-implication-alectinib"
    },
    {
      "reference": "Observation/gx-genomic-therapeutic-implication-brigatinib"
    },
    {
      "reference": "Observation/gx-genomic-therapeutic-implication-ceritinib"
    },
    {
      "reference": "Observation/gx-genomic-therapeutic-implication-crizotinib"
    },
    {
      "reference": "Observation/gx-genomic-therapeutic-implication-lorlatinib"
    }
  ]
}