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Packagehl7.eu.fhir.protect-child
Resource TypeConceptMap
IdConceptMap-dm-instrumental-investigation-to-omop.json
FHIR VersionR4
Sourcehttps://build.fhir.org/ig/hl7-eu/protect-child/ConceptMap-dm-instrumental-investigation-to-omop.html
URLhttps://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ConceptMap/dm-instrumental-investigation-to-omop
Version0.1.0-ci-build
Statusdraft
Date2026-09-28T06:51:47+00:00
NameDmInstrumentalInvestigationToOmop
TitleDM instrumental_investigation → OMOP
Realmeu
Authorityhl7
DescriptionThe OMOP concepts for each column of the DMv1.2 instrumental_investigation table, from the DM → FHIR → OMOP crosswalk. Each target's comment names the OMOP CDM field it fills. `equivalent`: the column's own concept; `narrower`: one of several concepts the column's values map to; `relatedto`: a value, unit or qualifier concept. Concept IDs of 2000000000 and above are PROTECT-CHILD custom concepts (CodeSystem ProtectChildOmopVocabulary).

Resources that use this resource

No resources found


Resources that this resource uses

CodeSystem
hl7.terminology.r4b#6.0.2fhir-terminology.ohdsi.orgOHDSI Standardized Vocabularies
hl7.eu.fhir.protect-child#currentdm-variable-csPROTECT-CHILD Data Model Variables

Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: ConceptMap dm-instrumental-investigation-to-omop

This mapping does not specify any particular context of use.


Mapping from PROTECT-CHILD Data Model Variables to OHDSI Standardized Vocabularies

Source Concept DetailsRelationshipTarget Concept DetailsComment
Codes from PROTECT-CHILD Data Model VariablesCodes from OHDSI Standardized Vocabularies
instrumental_investigation.instrumental_investigationinstrumental_investigation.instrumental_investigationnarrower4061009CT of abdomenOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4083230MRI of abdomenOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4299523AngiographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4303663CT angiography with contrastOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower37311324MRI of brainOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4329502SPECT of kidney using dimercaptosuccinic acidOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower37152490Doppler ultrasonographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4346528Renal isotope studiesOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4230911EchocardiographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4163951Electrocardiographic procedureOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4181917ElectroencephalogramOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4217034Kidney biopsyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4167052Doppler ultrasonography of kidneyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4147846Echography of kidneyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4314001Biopsy of liverOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4160708Doppler ultrasonography of liver and portal systemOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4346948Tc99m-MAG3 renogramOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4194588Magnetic resonance cholangiopancreatographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4168020Fluoroscopic micturating cystourethrographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4305790Positron emission tomographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4060500CAT scan - whole bodyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4037672UltrasonographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower40479203Ultrasound elastography of liverOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
instrumental_investigation.resultinstrumental_investigation.resultnarrower4085245No abnormality detectedOMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED.
narrower40484102Abnormal finding on evaluation procedureOMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED.

Source1

{
  "resourceType": "ConceptMap",
  "id": "dm-instrumental-investigation-to-omop",
  "text": {
    "status": "generated",
    "div": "<!-- snip (see above) -->"
  },
  "url": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ConceptMap/dm-instrumental-investigation-to-omop",
  "version": "0.1.0-ci-build",
  "name": "DmInstrumentalInvestigationToOmop",
  "title": "DM instrumental_investigation → OMOP",
  "status": "draft",
  "experimental": false,
  "date": "2026-09-28T06:51:47+00:00",
  "publisher": "Protect Child",
  "contact": [
    {
      "name": "Protect Child",
      "telecom": [
        {
          "system": "url",
          "value": "https://protect-child.eu/"
        }
      ]
    }
  ],
  "description": "The OMOP concepts for each column of the DMv1.2 instrumental_investigation table, from the DM → FHIR → OMOP crosswalk. Each target's comment names the OMOP CDM field it fills. `equivalent`: the column's own concept; `narrower`: one of several concepts the column's values map to; `relatedto`: a value, unit or qualifier concept. Concept IDs of 2000000000 and above are PROTECT-CHILD custom concepts (CodeSystem ProtectChildOmopVocabulary).",
  "group": [
    {
      "source": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/dm-variable-cs",
      "target": "https://fhir-terminology.ohdsi.org",
      "element": [
        {
          "code": "instrumental_investigation.instrumental_investigation",
          "target": [
            {
              "code": "4061009",
              "display": "CT of abdomen",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4083230",
              "display": "MRI of abdomen",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4299523",
              "display": "Angiography",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4303663",
              "display": "CT angiography with contrast",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "37311324",
              "display": "MRI of brain",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4329502",
              "display": "SPECT of kidney using dimercaptosuccinic acid",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "37152490",
              "display": "Doppler ultrasonography",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4346528",
              "display": "Renal isotope studies",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4230911",
              "display": "Echocardiography",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4163951",
              "display": "Electrocardiographic procedure",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4181917",
              "display": "Electroencephalogram",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4217034",
              "display": "Kidney biopsy",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4167052",
              "display": "Doppler ultrasonography of kidney",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4147846",
              "display": "Echography of kidney",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4314001",
              "display": "Biopsy of liver",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4160708",
              "display": "Doppler ultrasonography of liver and portal system",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4346948",
              "display": "Tc99m-MAG3 renogram",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4194588",
              "display": "Magnetic resonance cholangiopancreatography",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4168020",
              "display": "Fluoroscopic micturating cystourethrography",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4305790",
              "display": "Positron emission tomography",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4060500",
              "display": "CAT scan - whole body",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "4037672",
              "display": "Ultrasonography",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            },
            {
              "code": "40479203",
              "display": "Ultrasound elastography of liver",
              "equivalence": "narrower",
              "comment": "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED."
            }
          ]
        },
        {
          "code": "instrumental_investigation.result",
          "target": [
            {
              "code": "4085245",
              "display": "No abnormality detected",
              "equivalence": "narrower",
              "comment": "OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED."
            },
            {
              "code": "40484102",
              "display": "Abnormal finding on evaluation procedure",
              "equivalence": "narrower",
              "comment": "OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED."
            }
          ]
        }
      ]
    }
  ]
}