FHIR IG analytics

Resources that use this resource

No resources found

Resources that this resource uses

Narrative

Note: links and images are rebased to the (stated) source

Source1

{
  "resourceType": "ConceptMap",
  "id": "dm-imm-pat-to-omop",
  "text": {
    "status": "generated",
    "div": "<!-- snip (see above) -->"
  },
  "url": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ConceptMap/dm-imm-pat-to-omop",
  "version": "0.1.0-ci-build",
  "name": "DmImmPatToOmop",
  "title": "DM imm_pat → OMOP",
  "status": "draft",
  "experimental": false,
  "date": "2026-09-28T06:51:47+00:00",
  "publisher": "Protect Child",
  "contact": [
    {
      "name": "Protect Child",
      "telecom": [
        {
          "system": "url",
          "value": "https://protect-child.eu/"
        }
      ]
    }
  ],
  "description": "The OMOP concepts for each column of the DMv1.2 imm_pat table, from the DM → FHIR → OMOP crosswalk. Each target's comment names the OMOP CDM field it fills. `equivalent`: the column's own concept; `narrower`: one of several concepts the column's values map to; `relatedto`: a value, unit or qualifier concept. Concept IDs of 2000000000 and above are PROTECT-CHILD custom concepts (CodeSystem ProtectChildOmopVocabulary). Pending (not yet in Athena): pre_dose_level (115766-8); auc (115789-0).",
  "group": [
    {
      "source": "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/dm-variable-cs",
      "target": "https://fhir-terminology.ohdsi.org",
      "element": [
        {
          "code": "imm_pat.phase",
          "target": [
            {
              "code": "905623",
              "display": "Induction",
              "equivalence": "relatedto",
              "comment": "OMOP OBSERVATION.qualifier_concept_id; vocabulary HemOnc."
            },
            {
              "code": "763393",
              "display": "Maintenance dose",
              "equivalence": "relatedto",
              "comment": "OMOP OBSERVATION.qualifier_concept_id; vocabulary SNOMED."
            }
          ]
        },
        {
          "code": "imm_pat.dose",
          "target": [
            {
              "code": "4162374",
              "display": "Drug dose",
              "equivalence": "equivalent",
              "comment": "OMOP OBSERVATION.observation_concept_id; vocabulary SNOMED."
            }
          ]
        },
        {
          "code": "imm_pat.pre_dose_level",
          "target": [
            {
              "code": "46236053",
              "display": "Tacrolimus [Mass/volume] in Blood --trough",
              "equivalence": "narrower",
              "comment": "OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."
            },
            {
              "code": "3042505",
              "display": "cycloSPORINE [Mass/volume] in Blood --trough",
              "equivalence": "narrower",
              "comment": "OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."
            },
            {
              "code": "46236054",
              "display": "Everolimus [Mass/volume] in Blood by LC/MS/MS --trough",
              "equivalence": "narrower",
              "comment": "OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."
            },
            {
              "code": "43055501",
              "display": "Mycophenolate [Mass/volume] in Serum or Plasma --trough",
              "equivalence": "narrower",
              "comment": "OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."
            }
          ]
        },
        {
          "code": "imm_pat.csa_2h_post_dose_level",
          "target": [
            {
              "code": "3046333",
              "display": "cycloSPORINE [Mass/volume] in Blood --2 hours post dose",
              "equivalence": "equivalent",
              "comment": "OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."
            }
          ]
        },
        {
          "code": "imm_pat.auc",
          "target": [
            {
              "code": "37020458",
              "display": "Tacrolimus [AUC] in Blood",
              "equivalence": "narrower",
              "comment": "OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."
            },
            {
              "code": "1989318",
              "display": "cycloSPORINE [AUC] in Blood",
              "equivalence": "narrower",
              "comment": "OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."
            },
            {
              "code": "2000000022",
              "display": "Measured AUC for [drug]",
              "equivalence": "narrower",
              "comment": "OMOP MEASUREMENT.measurement_concept_id; vocabulary PROTECT-CHILD."
            }
          ]
        },
        {
          "code": "imm_pat.unit",
          "target": [
            {
              "code": "9562",
              "display": "milligram per kilogram",
              "equivalence": "relatedto",
              "comment": "OMOP OBSERVATION.unit_concept_id; vocabulary UCUM."
            },
            {
              "code": "9563",
              "display": "milligram per square meter",
              "equivalence": "relatedto",
              "comment": "OMOP OBSERVATION.unit_concept_id; vocabulary UCUM."
            },
            {
              "code": "8576",
              "display": "milligram",
              "equivalence": "relatedto",
              "comment": "OMOP OBSERVATION.unit_concept_id; vocabulary UCUM."
            }
          ]
        }
      ]
    }
  ]
}