| Package | hl7.eu.fhir.oah |
| Type | StructureDefinition |
| Id | BioIndicatorsOah |
| FHIR Version | R4 |
| Source | http://hl7.eu/fhir/ig/oah/https://build.fhir.org/ig/hl7-eu/oah/StructureDefinition-BioIndicatorsOah.html |
| URL | http://hl7.eu/fhir/ig/oah/StructureDefinition/BioIndicatorsOah |
| Version | 0.1.0 |
| Status | draft |
| Date | 2025-07-22T20:24:10+00:00 |
| Name | BioIndicatorsOah |
| Title | Key biological quality indicators |
| Realm | eu |
| Authority | hl7 |
| Description | Biological indicators of health risk . These are the indicators that were considered useful to test the links between aquatic ecosystem health and human well-being in the scope of the OneAquaHeath project |
| Type | http://hl7.eu/fhir/ig/oah/StructureDefinition/BioIndicatorsOah |
| Kind | logical |
No resources found
| StructureDefinition | |
| Indicator | Indicator |
Note: links and images are rebased to the (stated) source
Generated Narrative: StructureDefinition BioIndicatorsOah
| Name | Flags | Card. | Type | Description & Constraints |
|---|---|---|---|---|
  BioIndicatorsOah | 0..* | Base | Key biological quality indicators | |
  macroinvertebreates | 0..* | Indicator | Benthic Macroinvertebrates | |
  type | 1..1 | CodeableConcept | Type of invertebrate measure | |
| result[x] | 1..1 | Quantity | Result | |
 component | 0..0 | |||
| diatomes | 0..* | Indicator | Diatoms (microalgae/phytobenthos) | |
| type | 1..1 | CodeableConcept | Type of diatome measure | |
| result[x] | 1..1 | Quantity | Result | |
| component | 0..0 | |||
| fishes | 0..* | Indicator | Fish | |
| type | 1..1 | CodeableConcept | Type of fish measure | |
| result[x] | 1..1 | Quantity | Result | |
| component | 0..0 | |||
| macrophytes | 0..* | Indicator | Macrophytes (aquatic plants) | |
| type | 1..1 | CodeableConcept | Type of macrophytes measure | |
| result[x] | 0..1 | Quantity | Result | |
| component | 8..16 | Base | Component | |
  result[x] | 1..1 | Result | ||
| resultCodeableConcept | CodeableConcept | |||
 resultString | string | |||
| riparianVegetation | 0..* | Indicator | Riparian vegetation | |
| component | 3..6 | Base | Component | |
| result[x] | 1..1 | Result | ||
| resultCodeableConcept | CodeableConcept | |||
| resultString | string | |||
| microbiomes | 0..* | Indicator | Microbiomes/Biofilms | |
| Documentation for this format | ||||
FHIR{
"resourceType": "StructureDefinition",
"id": "BioIndicatorsOah",
"text": {
"status": "extensions",
"div": "<!-- snip (see above) -->"
},
"url": "http://hl7.eu/fhir/ig/oah/StructureDefinition/BioIndicatorsOah",
"version": "0.1.0",
"name": "BioIndicatorsOah",
"title": "Key biological quality indicators",
"status": "draft",
"date": "2025-07-22T20:24:10+00:00",
"publisher": "OneAquaHealth Project",
"contact": [
{
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"telecom": [
{
"system": "url",
"value": "https://www.oneaquahealth.eu"
}
]
}
],
"description": "Biological indicators of health risk . These are the indicators that were considered useful to test the links between aquatic ecosystem health and human well-being in the scope of the OneAquaHeath project",
"jurisdiction": [
{
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"code": "150",
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{
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"definition": "Diatoms (microalgae/phytobenthos)",
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"id": "BioIndicatorsOah.diatomes.result[x]",
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"definition": "Result of the observation: e.g. number of diatoma vulgaris in the sample in the sample",
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{
"id": "BioIndicatorsOah.fishes",
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"id": "BioIndicatorsOah.fishes.type",
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{
"id": "BioIndicatorsOah.fishes.result[x]",
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{
"id": "BioIndicatorsOah.macrophytes",
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{
"id": "BioIndicatorsOah.macrophytes.type",
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{
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},
{
"id": "BioIndicatorsOah.macrophytes.performer[x]",
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{
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]
},
{
"id": "BioIndicatorsOah.macrophytes.result[x]",
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"short": "Result",
"definition": "Result of the observation: it could be a single value or a set of results",
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"max": "1",
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"path": "Indicator.result[x]",
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"max": "1"
},
"type": [
{
"code": "CodeableConcept"
},
{
"code": "Quantity"
}
]
},
{
"id": "BioIndicatorsOah.macrophytes.component",
"path": "BioIndicatorsOah.macrophytes.component",
"short": "Component",
"definition": "Set of results defining this indicator",
"min": 0,
"max": "*",
"base": {
"path": "Indicator.component",
"min": 0,
"max": "*"
},
"type": [
{
"code": "Base"
}
]
},
{
"id": "BioIndicatorsOah.macrophytes.component.type",
"path": "BioIndicatorsOah.macrophytes.component.type",
"short": "What is measured",
"definition": "Type of indicator : e.g. presence of liverworts",
"min": 1,
"max": "1",
"base": {
"path": "Indicator.component.type",
"min": 1,
"max": "1"
},
"type": [
{
"code": "CodeableConcept"
}
]
},
{
"id": "BioIndicatorsOah.macrophytes.component.result[x]",
"path": "BioIndicatorsOah.macrophytes.component.result[x]",
"short": "Result",
"definition": "Result of the set of observation: it could be a single value or a set of results",
"min": 1,
"max": "1",
"base": {
"path": "Indicator.component.result[x]",
"min": 0,
"max": "1"
},
"type": [
{
"code": "CodeableConcept"
},
{
"code": "string"
}
]
},
{
"id": "BioIndicatorsOah.macrophytes.type",
"path": "BioIndicatorsOah.macrophytes.type",
"short": "Type of macrophytes measure",
"definition": "Type of measured perfomed : e.g. number of carps in the sample",
"min": 1,
"max": "1",
"base": {
"path": "BioIndicatorsOah.macrophytes.type",
"min": 1,
"max": "1"
},
"type": [
{
"code": "CodeableConcept"
}
]
},
{
"id": "BioIndicatorsOah.macrophytes.result[x]",
"path": "BioIndicatorsOah.macrophytes.result[x]",
"short": "Result",
"definition": "Result of the observation: e.g. number of carps in the sample",
"min": 0,
"max": "1",
"base": {
"path": "BioIndicatorsOah.macrophytes.result[x]",
"min": 0,
"max": "1"
},
"type": [
{
"code": "Quantity"
}
]
},
{
"id": "BioIndicatorsOah.macrophytes.component",
"path": "BioIndicatorsOah.macrophytes.component",
"short": "Component",
"definition": "Set of results defining this indicator: it may include the abundance of vegetation type; a string decsribing the presence of non-native species including the name when appplicable",
"min": 8,
"max": "16",
"base": {
"path": "BioIndicatorsOah.macrophytes.component",
"min": 8,
"max": "16"
},
"type": [
{
"code": "Base"
}
]
},
{
"id": "BioIndicatorsOah.riparianVegetation",
"path": "BioIndicatorsOah.riparianVegetation",
"short": "Riparian vegetation",
"definition": "Riparian vegetation",
"min": 0,
"max": "*",
"base": {
"path": "BioIndicatorsOah.riparianVegetation",
"min": 0,
"max": "*"
},
"type": [
{
"code": "http://hl7.eu/fhir/ig/oah/StructureDefinition/Indicator"
}
]
},
{
"id": "BioIndicatorsOah.riparianVegetation.sampleDetails",
"path": "BioIndicatorsOah.riparianVegetation.sampleDetails",
"short": "Sample",
"definition": "Information about the sample used for this measure",
"min": 1,
"max": "1",
"base": {
"path": "Indicator.sampleDetails",
"min": 1,
"max": "1"
},
"type": [
{
"code": "http://hl7.eu/fhir/ig/oah/StructureDefinition/Sample"
}
]
},
{
"id": "BioIndicatorsOah.riparianVegetation.type",
"path": "BioIndicatorsOah.riparianVegetation.type",
"short": "What is measured",
"definition": "Type of indicator : e.g. number of mosquito in the sample",
"min": 1,
"max": "1",
"base": {
"path": "Indicator.type",
"min": 1,
"max": "1"
},
"type": [
{
"code": "CodeableConcept"
}
]
},
{
"id": "BioIndicatorsOah.riparianVegetation.date",
"path": "BioIndicatorsOah.riparianVegetation.date",
"short": "Observation date",
"definition": "Observation date",
"min": 1,
"max": "*",
"base": {
"path": "Indicator.date",
"min": 1,
"max": "*"
},
"type": [
{
"code": "dateTime"
}
]
},
{
"id": "BioIndicatorsOah.riparianVegetation.performer[x]",
"path": "BioIndicatorsOah.riparianVegetation.performer[x]",
"short": "Who made the measure",
"definition": "Who made the measure",
"min": 1,
"max": "*",
"base": {
"path": "Indicator.performer[x]",
"min": 1,
"max": "*"
},
"type": [
{
"code": "PractitionerRole"
},
{
"code": "Organization"
}
]
},
{
"id": "BioIndicatorsOah.riparianVegetation.result[x]",
"path": "BioIndicatorsOah.riparianVegetation.result[x]",
"short": "Result",
"definition": "Result of the observation: it could be a single value or a set of results",
"min": 0,
"max": "1",
"base": {
"path": "Indicator.result[x]",
"min": 0,
"max": "1"
},
"type": [
{
"code": "CodeableConcept"
},
{
"code": "Quantity"
}
]
},
{
"id": "BioIndicatorsOah.riparianVegetation.component",
"path": "BioIndicatorsOah.riparianVegetation.component",
"short": "Component",
"definition": "Set of results defining this indicator",
"min": 0,
"max": "*",
"base": {
"path": "Indicator.component",
"min": 0,
"max": "*"
},
"type": [
{
"code": "Base"
}
]
},
{
"id": "BioIndicatorsOah.riparianVegetation.component.type",
"path": "BioIndicatorsOah.riparianVegetation.component.type",
"short": "What is measured",
"definition": "Type of indicator : e.g. presence of liverworts",
"min": 1,
"max": "1",
"base": {
"path": "Indicator.component.type",
"min": 1,
"max": "1"
},
"type": [
{
"code": "CodeableConcept"
}
]
},
{
"id": "BioIndicatorsOah.riparianVegetation.component.result[x]",
"path": "BioIndicatorsOah.riparianVegetation.component.result[x]",
"short": "Result",
"definition": "Result of the set of observation: it could be a single value or a set of results",
"min": 1,
"max": "1",
"base": {
"path": "Indicator.component.result[x]",
"min": 0,
"max": "1"
},
"type": [
{
"code": "CodeableConcept"
},
{
"code": "string"
}
]
},
{
"id": "BioIndicatorsOah.riparianVegetation.component",
"path": "BioIndicatorsOah.riparianVegetation.component",
"short": "Component",
"definition": "Set of results defining this indicator: it may include the cover category of vegetation and a string decsribing the presence of non-native species including the name when appplicable",
"min": 3,
"max": "6",
"base": {
"path": "BioIndicatorsOah.riparianVegetation.component",
"min": 3,
"max": "6"
},
"type": [
{
"code": "Base"
}
]
},
{
"id": "BioIndicatorsOah.microbiomes",
"path": "BioIndicatorsOah.microbiomes",
"short": "Microbiomes/Biofilms",
"definition": "Microbiomes/Biofilms",
"min": 0,
"max": "*",
"base": {
"path": "BioIndicatorsOah.microbiomes",
"min": 0,
"max": "*"
},
"type": [
{
"code": "http://hl7.eu/fhir/ig/oah/StructureDefinition/Indicator"
}
]
}
]
},
"differential": {
"element": [
{
"id": "BioIndicatorsOah",
"path": "BioIndicatorsOah",
"short": "Key biological quality indicators",
"definition": "Biological indicators of health risk . These are the indicators that were considered useful to test the links between aquatic ecosystem health and human well-being in the scope of the OneAquaHeath project"
},
{
"id": "BioIndicatorsOah.macroinvertebreates",
"path": "BioIndicatorsOah.macroinvertebreates",
"short": "Benthic Macroinvertebrates",
"definition": "Benthic Macroinvertebrates",
"min": 0,
"max": "*",
"type": [
{
"code": "http://hl7.eu/fhir/ig/oah/StructureDefinition/Indicator"
}
]
},
{
"id": "BioIndicatorsOah.macroinvertebreates.type",
"path": "BioIndicatorsOah.macroinvertebreates.type",
"short": "Type of invertebrate measure",
"definition": "Type of measured perfomed : e.g. number of snails in the sample",
"min": 1,
"max": "1",
"type": [
{
"code": "CodeableConcept"
}
]
},
{
"id": "BioIndicatorsOah.macroinvertebreates.result[x]",
"path": "BioIndicatorsOah.macroinvertebreates.result[x]",
"short": "Result",
"definition": "Result of the observation: .g. number of snails in the sample",
"min": 1,
"max": "1",
"type": [
{
"code": "Quantity"
}
]
},
{
"id": "BioIndicatorsOah.macroinvertebreates.component",
"path": "BioIndicatorsOah.macroinvertebreates.component",
"short": "Component",
"definition": "Set of results defining this indicator",
"min": 0,
"max": "0",
"type": [
{
"code": "Base"
}
]
},
{
"id": "BioIndicatorsOah.diatomes",
"path": "BioIndicatorsOah.diatomes",
"short": "Diatoms (microalgae/phytobenthos)",
"definition": "Diatoms (microalgae/phytobenthos)",
"min": 0,
"max": "*",
"type": [
{
"code": "http://hl7.eu/fhir/ig/oah/StructureDefinition/Indicator"
}
]
},
{
"id": "BioIndicatorsOah.diatomes.type",
"path": "BioIndicatorsOah.diatomes.type",
"short": "Type of diatome measure",
"definition": "Type of measured perfomed : e.g. number of diatoma vulgaris in the sample",
"min": 1,
"max": "1",
"type": [
{
"code": "CodeableConcept"
}
]
},
{
"id": "BioIndicatorsOah.diatomes.result[x]",
"path": "BioIndicatorsOah.diatomes.result[x]",
"short": "Result",
"definition": "Result of the observation: e.g. number of diatoma vulgaris in the sample in the sample",
"min": 1,
"max": "1",
"type": [
{
"code": "Quantity"
}
]
},
{
"id": "BioIndicatorsOah.diatomes.component",
"path": "BioIndicatorsOah.diatomes.component",
"short": "Component",
"definition": "Set of results defining this indicator",
"min": 0,
"max": "0",
"type": [
{
"code": "Base"
}
]
},
{
"id": "BioIndicatorsOah.fishes",
"path": "BioIndicatorsOah.fishes",
"short": "Fish",
"definition": "Fish",
"min": 0,
"max": "*",
"type": [
{
"code": "http://hl7.eu/fhir/ig/oah/StructureDefinition/Indicator"
}
]
},
{
"id": "BioIndicatorsOah.fishes.type",
"path": "BioIndicatorsOah.fishes.type",
"short": "Type of fish measure",
"definition": "Type of measured perfomed : e.g. number of carps in the sample",
"min": 1,
"max": "1",
"type": [
{
"code": "CodeableConcept"
}
]
},
{
"id": "BioIndicatorsOah.fishes.result[x]",
"path": "BioIndicatorsOah.fishes.result[x]",
"short": "Result",
"definition": "Result of the observation: e.g. number of carps in the sample",
"min": 1,
"max": "1",
"type": [
{
"code": "Quantity"
}
]
},
{
"id": "BioIndicatorsOah.fishes.component",
"path": "BioIndicatorsOah.fishes.component",
"short": "Component",
"definition": "Set of results defining this indicator",
"min": 0,
"max": "0",
"type": [
{
"code": "Base"
}
]
},
{
"id": "BioIndicatorsOah.macrophytes",
"path": "BioIndicatorsOah.macrophytes",
"short": "Macrophytes (aquatic plants)",
"definition": "Macrophytes (aquatic plants)",
"min": 0,
"max": "*",
"type": [
{
"code": "http://hl7.eu/fhir/ig/oah/StructureDefinition/Indicator"
}
]
},
{
"id": "BioIndicatorsOah.macrophytes.type",
"path": "BioIndicatorsOah.macrophytes.type",
"short": "Type of macrophytes measure",
"definition": "Type of measured perfomed : e.g. number of carps in the sample",
"min": 1,
"max": "1",
"type": [
{
"code": "CodeableConcept"
}
]
},
{
"id": "BioIndicatorsOah.macrophytes.result[x]",
"path": "BioIndicatorsOah.macrophytes.result[x]",
"short": "Result",
"definition": "Result of the observation: e.g. number of carps in the sample",
"min": 0,
"max": "1",
"type": [
{
"code": "Quantity"
}
]
},
{
"id": "BioIndicatorsOah.macrophytes.component",
"path": "BioIndicatorsOah.macrophytes.component",
"short": "Component",
"definition": "Set of results defining this indicator: it may include the abundance of vegetation type; a string decsribing the presence of non-native species including the name when appplicable",
"min": 8,
"max": "16",
"type": [
{
"code": "Base"
}
]
},
{
"id": "BioIndicatorsOah.macrophytes.component.result[x]",
"path": "BioIndicatorsOah.macrophytes.component.result[x]",
"short": "Result",
"definition": "Result of the set of observation: it could be a single value or a set of results",
"min": 1,
"max": "1",
"type": [
{
"code": "CodeableConcept"
},
{
"code": "string"
}
]
},
{
"id": "BioIndicatorsOah.riparianVegetation",
"path": "BioIndicatorsOah.riparianVegetation",
"short": "Riparian vegetation",
"definition": "Riparian vegetation",
"min": 0,
"max": "*",
"type": [
{
"code": "http://hl7.eu/fhir/ig/oah/StructureDefinition/Indicator"
}
]
},
{
"id": "BioIndicatorsOah.riparianVegetation.component",
"path": "BioIndicatorsOah.riparianVegetation.component",
"short": "Component",
"definition": "Set of results defining this indicator: it may include the cover category of vegetation and a string decsribing the presence of non-native species including the name when appplicable",
"min": 3,
"max": "6",
"type": [
{
"code": "Base"
}
]
},
{
"id": "BioIndicatorsOah.riparianVegetation.component.result[x]",
"path": "BioIndicatorsOah.riparianVegetation.component.result[x]",
"short": "Result",
"definition": "Result of the set of observation: it could be a single value or a set of results",
"min": 1,
"max": "1",
"type": [
{
"code": "CodeableConcept"
},
{
"code": "string"
}
]
},
{
"id": "BioIndicatorsOah.microbiomes",
"path": "BioIndicatorsOah.microbiomes",
"short": "Microbiomes/Biofilms",
"definition": "Microbiomes/Biofilms",
"min": 0,
"max": "*",
"type": [
{
"code": "http://hl7.eu/fhir/ig/oah/StructureDefinition/Indicator"
}
]
}
]
}
}