FHIR IG analytics| Package | hl7.eu.fhir.flute |
| Resource Type | Questionnaire |
| Id | Questionnaire-Questionnaire-StudyVariable.json |
| FHIR Version | R4 |
| Source | https://build.fhir.org/ig/hl7-eu/flute/Questionnaire-Questionnaire-StudyVariable.html |
| URL | http://hl7.eu/fhir/ig/flute/Questionnaire/Questionnaire-StudyVariable |
| Version | 0.1.0 |
| Status | active |
| Date | 2025-10-22 |
| Name | StudyVariableExtraction |
| Title | Study variable Extraction |
| Realm | eu |
| Authority | hl7 |
| Description | Study variable extractable questionnaire |
No resources found
No resources found
Note: links and images are rebased to the (stated) source
Generated Narrative: Questionnaire Questionnaire-StudyVariable
Structure| LinkID | Text | Cardinality | Type | Flags | Description & Constraints |
|---|---|---|---|---|---|
  StudyVariableExtraction | Study variable extractable questionnaire | Questionnaire | http://hl7.eu/fhir/ig/flute/Questionnaire/Questionnaire-StudyVariable#0.1.0 | ||
  g-proc | Procedure Biopsy group | 0..1 | group | Definition: Procedure | |
  type-of-biopsy | Type of biopsy | 1..1 | choice | Definition: Procedure.category.coding Value Set: Type of Biopsy | |
| procedure-status | Status | 1..1 | choice |  | Definition: Procedure.status Options: 1 option |
 biopsy-date | Date when the biopsy was performed | 1..1 | dateTime | Definition: Procedure.performedDateTime | |
| biopsy | Biopsy | 1..1 | choice | | Definition: Procedure.code.coding Options: 1 option |
 biopsy-bodySite | Biopsy bodySite | 1..1 | choice | Definition: Procedure.bodySite.coding Options: 1 option | |
| g-fam-hist | Family history group | 0..1 | group | Definition: FamilyMemberHistory | |
| family-history-pca | Family history of prostate cancer | 1..1 | choice | Definition: FamilyMemberHistory.condition.code.coding Value Set: Malignant tumor of prostate Value Set | |
| family-status | Family Status | 1..1 | choice | | Definition: FamilyMemberHistory.status Options: 1 option |
| family-relationship | Family relationship | 1..1 | choice | | Definition: FamilyMemberHistory.relationship.coding Options: 1 option |
| g-obs-psa | Observation PSA group | 0..1 | group | Definition: Observation | |
 psa | Measure of prostate-specific antigen reported in ng/ml | 1..1 | quantity | Definition: Observation.value | |
| psa-code | PSA code | 1..1 | choice | | Definition: Observation.code.coding Options: 1 option |
| psa-status | PSA Status | 1..1 | choice | | Definition: Observation.status Options: 1 option |
| g-proc-dre | Procedure DRE group | 0..1 | group | Definition: Procedure | |
| dre | Results of digital rectal examination | 1..1 | choice | Definition: Procedure.outcome.coding Value Set: DRE Observation Interpretation Codes | |
| dre-code | DRE code | 1..1 | choice | | Definition: Procedure.code.coding Options: 1 option |
| dre-status | DRE Status | 1..1 | choice | | Definition: Procedure.status Options: 1 option |
| dre-bodySite | DRE bodySite | 1..1 | choice | | Definition: Procedure.bodySite.coding Options: 1 option |
| g-obs-prost-vol | Observation Prostate Volume group | 0..1 | group | Definition: Observation | |
| prostate-volume | Prostate volume in cc | 1..1 | quantity | Definition: Observation.value | |
| prostate-code | Prostate volume code | 1..1 | choice | | Definition: Observation.code.coding Options: 1 option |
| prostate-status | Prostate volume Status | 1..1 | choice | | Definition: Observation.status Options: 1 option |
| prostate-bodySite | Prostate volume bodySite | 1..1 | choice | | Definition: Observation.bodySite.coding Options: 1 option |
| g-obs-pirads | Observation PI-RADS group | 0..1 | group | Definition: Observation | |
| pirads | PI-RADS score | 1..1 | choice | Definition: Observation.valueCodeableConcept.coding Options: 5 options | |
| pirads-code | PI-RADS code | 1..1 | choice | | Definition: Observation.code.coding Options: 1 option |
| pirads-status | PI-RADS Status | 1..1 | choice | | Definition: Observation.status Options: 1 option |
| g-imag | Imaging Study group | 0..1 | group | Definition: ImagingStudy | |
  study-id-system | Study ID System | 1..1 | url | Definition: ImagingStudy.identifier.system | |
 study-id-value | Study ID value | 1..1 | string | Definition: ImagingStudy.identifier.value | |
| imagingstudy-status | Study Status | 1..1 | choice | | Definition: ImagingStudy.status Options: 1 option |
| imagingstudy-started | Study Started DateTime | 1..1 | dateTime | Definition: ImagingStudy.started | |
| imagingstudy-endpoint | Study DICOM URL Endpoint | 1..1 | string | Definition: ImagingStudy.endpoint.display | |
| imagingstudy-series-uid | Study Series UID | 1..1 | string | Definition: ImagingStudy.series[0].uid | |
| imagingstudy-series-modality | Study Series Modality | 1..1 | choice | Definition: ImagingStudy.series[0].modality Value Set: AcquisitionModality | |
| imagingstudy-instance-uid | Study instance UID | 1..1 | string | Definition: ImagingStudy.series[0].instance[0].uid | |
| imagingstudy-instance-class | Study instance SOP Class | 1..1 | choice | Definition: ImagingStudy.series[0].instance[0].sopClass Value Set: DICOM SOP Class UIDs | |
| imagingstudy-note | Any metadata relevant to filter the dataset before ML training | 0..1 | string | Definition: ImagingStudy.note.text | |
| Documentation for this format | |||||
Options Sets
Answer options for procedure-status
Answer options for biopsy
Answer options for biopsy-bodySite
Answer options for family-status
Answer options for family-relationship
Answer options for psa-code
Answer options for psa-status
Answer options for dre-code
Answer options for dre-status
Answer options for dre-bodySite
Answer options for prostate-code
Answer options for prostate-status
Answer options for prostate-bodySite
Answer options for pirads
Answer options for pirads-code
Answer options for pirads-status
Answer options for imagingstudy-status
FHIR
FHIRsmith{
"resourceType": "Questionnaire",
"id": "Questionnaire-StudyVariable",
"meta": {
"profile": [
"http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-extr-defn"
]
},
"text": {
"status": "extensions",
"div": "<!-- snip (see above) -->"
},
"url": "http://hl7.eu/fhir/ig/flute/Questionnaire/Questionnaire-StudyVariable",
"version": "0.1.0",
"name": "StudyVariableExtraction",
"title": "Study variable Extraction",
"status": "active",
"experimental": true,
"subjectType": [
"Patient"
],
"date": "2025-10-22",
"publisher": "Flute Project",
"contact": [
{
"name": "Flute Project",
"telecom": [
{
"system": "url",
"value": "https://www.fluteproject.eu/"
}
]
},
{
"name": "Flute Project",
"telecom": [
{
"system": "url",
"value": "https://www.fluteproject.eu/"
}
]
}
],
"description": "Study variable extractable questionnaire",
"item": [
{
"linkId": "g-proc",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-Biopsy#Procedure",
"text": "Procedure Biopsy group",
"type": "group",
"required": false,
"item": [
{
"linkId": "type-of-biopsy",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-Biopsy#Procedure.category.coding",
"text": "Type of biopsy",
"type": "choice",
"required": true,
"repeats": false,
"answerValueSet": "http://hl7.eu/fhir/ig/flute/ValueSet/VS-BiopsyType"
},
{
"linkId": "procedure-status",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-Biopsy#Procedure.status",
"code": [
{
"system": "http://snomed.info/sct",
"code": "86273004"
}
],
"text": "Status",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://hl7.org/fhir/event-status",
"code": "completed"
},
"initialSelected": true
}
]
},
{
"linkId": "biopsy-date",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-Biopsy#Procedure.performedDateTime",
"text": "Date when the biopsy was performed",
"type": "dateTime",
"required": true,
"repeats": false
},
{
"linkId": "biopsy",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-Biopsy#Procedure.code.coding",
"text": "Biopsy",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://snomed.info/sct",
"code": "86273004",
"display": "Biopsy"
},
"initialSelected": true
}
]
},
{
"linkId": "biopsy-bodySite",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-Biopsy#Procedure.bodySite.coding",
"code": [
{
"system": "http://snomed.info/sct",
"code": "86273004"
}
],
"text": "Biopsy bodySite",
"type": "choice",
"required": true,
"repeats": false,
"answerOption": [
{
"valueCoding": {
"system": "http://snomed.info/sct",
"code": "41216001",
"display": "Prostatic structure (body structure)"
},
"initialSelected": true
}
]
}
]
},
{
"linkId": "g-fam-hist",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateCancerFamilyHistory#FamilyMemberHistory",
"code": [
{
"system": "http://snomed.info/sct",
"code": "399068003"
}
],
"text": "Family history group",
"type": "group",
"required": false,
"item": [
{
"linkId": "family-history-pca",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateCancerFamilyHistory#FamilyMemberHistory.condition.code.coding",
"text": "Family history of prostate cancer",
"type": "choice",
"required": true,
"repeats": false,
"answerValueSet": "http://hl7.eu/fhir/ig/flute/ValueSet/VS-PCa"
},
{
"linkId": "family-status",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateCancerFamilyHistory#FamilyMemberHistory.status",
"text": "Family Status",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://hl7.org/fhir/history-status",
"code": "completed"
},
"initialSelected": true
}
]
},
{
"linkId": "family-relationship",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateCancerFamilyHistory#FamilyMemberHistory.relationship.coding",
"text": "Family relationship",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode",
"code": "FAMMEMB"
},
"initialSelected": true
}
]
}
]
},
{
"linkId": "g-obs-psa",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateSpecificAntigen#Observation",
"text": "Observation PSA group",
"type": "group",
"required": false,
"item": [
{
"linkId": "psa",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateSpecificAntigen#Observation.value",
"code": [
{
"system": "http://loinc.org",
"code": "2857-1"
}
],
"text": "Measure of prostate-specific antigen reported in ng/ml",
"type": "quantity",
"required": true,
"repeats": false
},
{
"linkId": "psa-code",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateSpecificAntigen#Observation.code.coding",
"text": "PSA code",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://loinc.org",
"code": "2857-1",
"display": "Prostate specific Ag [Mass/volume] in Serum or Plasma"
},
"initialSelected": true
}
]
},
{
"linkId": "psa-status",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateSpecificAntigen#Observation.status",
"code": [
{
"system": "http://loinc.org",
"code": "2857-1"
}
],
"text": "PSA Status",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://hl7.org/fhir/observation-status",
"code": "final"
},
"initialSelected": true
}
]
}
]
},
{
"linkId": "g-proc-dre",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-DigitalRectalExamination#Procedure",
"text": "Procedure DRE group",
"type": "group",
"required": false,
"item": [
{
"linkId": "dre",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-DigitalRectalExamination#Procedure.outcome.coding",
"code": [
{
"system": "http://snomed.info/sct",
"code": "410006001"
}
],
"text": "Results of digital rectal examination",
"type": "choice",
"required": true,
"repeats": false,
"answerValueSet": "http://hl7.eu/fhir/ig/flute/ValueSet/VS-DREOutcomeCode"
},
{
"linkId": "dre-code",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-DigitalRectalExamination#Procedure.code.coding",
"text": "DRE code",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://snomed.info/sct",
"code": "410006001",
"display": "DRE - Digital rectal examination"
},
"initialSelected": true
}
]
},
{
"linkId": "dre-status",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-DigitalRectalExamination#Procedure.status",
"code": [
{
"system": "http://snomed.info/sct",
"code": "410006001"
}
],
"text": "DRE Status",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://hl7.org/fhir/event-status",
"code": "completed"
},
"initialSelected": true
}
]
},
{
"linkId": "dre-bodySite",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-DigitalRectalExamination#Procedure.bodySite.coding",
"text": "DRE bodySite",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://snomed.info/sct",
"code": "41216001",
"display": "Prostate"
},
"initialSelected": true
}
]
}
]
},
{
"linkId": "g-obs-prost-vol",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateVolume#Observation",
"text": "Observation Prostate Volume group",
"type": "group",
"required": false,
"item": [
{
"linkId": "prostate-volume",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateVolume#Observation.value",
"code": [
{
"system": "http://snomed.info/sct",
"code": "41216001"
}
],
"text": "Prostate volume in cc",
"type": "quantity",
"required": true,
"repeats": false
},
{
"linkId": "prostate-code",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateVolume#Observation.code.coding",
"text": "Prostate volume code",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://snomed.info/sct",
"code": "1297142007",
"display": "Volume of prostate"
},
"initialSelected": true
}
]
},
{
"linkId": "prostate-status",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateVolume#Observation.status",
"code": [
{
"system": "http://snomed.info/sct",
"code": "41216001"
}
],
"text": "Prostate volume Status",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://hl7.org/fhir/observation-status",
"code": "final"
},
"initialSelected": true
}
]
},
{
"linkId": "prostate-bodySite",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateVolume#Observation.bodySite.coding",
"text": "Prostate volume bodySite",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://snomed.info/sct",
"code": "41216001",
"display": "Prostate"
},
"initialSelected": true
}
]
}
]
},
{
"linkId": "g-obs-pirads",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-PIRADSScore#Observation",
"text": "Observation PI-RADS group",
"type": "group",
"required": false,
"item": [
{
"linkId": "pirads",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-PIRADSScore#Observation.valueCodeableConcept.coding",
"code": [
{
"system": "http://snomed.info/sct",
"code": "719178004"
}
],
"text": "PI-RADS score",
"type": "choice",
"required": true,
"repeats": false,
"answerOption": [
{
"valueCoding": {
"system": "http://hl7.eu/fhir/ig/flute/CodeSystem/COS-PIRADSScore",
"code": "1",
"display": "Very low"
}
},
{
"valueCoding": {
"system": "http://hl7.eu/fhir/ig/flute/CodeSystem/COS-PIRADSScore",
"code": "2",
"display": "Low"
}
},
{
"valueCoding": {
"system": "http://hl7.eu/fhir/ig/flute/CodeSystem/COS-PIRADSScore",
"code": "3",
"display": "Intermediate"
}
},
{
"valueCoding": {
"system": "http://hl7.eu/fhir/ig/flute/CodeSystem/COS-PIRADSScore",
"code": "4",
"display": "High"
}
},
{
"valueCoding": {
"system": "http://hl7.eu/fhir/ig/flute/CodeSystem/COS-PIRADSScore",
"code": "5",
"display": "Very high"
}
}
]
},
{
"linkId": "pirads-code",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-PIRADSScore#Observation.code.coding",
"text": "PI-RADS code",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://snomed.info/sct",
"code": "719178004",
"display": "Multiparametric magnetic resonance imaging of prostate"
},
"initialSelected": true
}
]
},
{
"linkId": "pirads-status",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-PIRADSScore#Observation.status",
"code": [
{
"system": "http://snomed.info/sct",
"code": "719178004"
}
],
"text": "PI-RADS Status",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://hl7.org/fhir/observation-status",
"code": "final"
},
"initialSelected": true
}
]
}
]
},
{
"linkId": "g-imag",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/imagingStudy-eu-flute#ImagingStudy",
"text": "Imaging Study group",
"type": "group",
"required": false,
"item": [
{
"linkId": "study-id-system",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/imagingStudy-eu-flute#ImagingStudy.identifier.system",
"text": "Study ID System",
"type": "url",
"required": true,
"repeats": false
},
{
"linkId": "study-id-value",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/imagingStudy-eu-flute#ImagingStudy.identifier.value",
"text": "Study ID value",
"type": "string",
"required": true,
"repeats": false
},
{
"linkId": "imagingstudy-status",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/imagingStudy-eu-flute#ImagingStudy.status",
"text": "Study Status",
"type": "choice",
"required": true,
"repeats": false,
"readOnly": true,
"answerOption": [
{
"valueCoding": {
"system": "http://hl7.org/fhir/imagingstudy-status",
"code": "available"
},
"initialSelected": true
}
]
},
{
"linkId": "imagingstudy-started",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/imagingStudy-eu-flute#ImagingStudy.started",
"text": "Study Started DateTime",
"type": "dateTime",
"required": true,
"repeats": false
},
{
"linkId": "imagingstudy-endpoint",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/imagingStudy-eu-flute#ImagingStudy.endpoint.display",
"text": "Study DICOM URL Endpoint",
"type": "string",
"required": true,
"repeats": false
},
{
"linkId": "imagingstudy-series-uid",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/imagingStudy-eu-flute#ImagingStudy.series[0].uid",
"text": "Study Series UID",
"type": "string",
"required": true,
"repeats": false
},
{
"linkId": "imagingstudy-series-modality",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/imagingStudy-eu-flute#ImagingStudy.series[0].modality",
"text": "Study Series Modality",
"type": "choice",
"required": true,
"repeats": false,
"answerValueSet": "http://dicom.nema.org/medical/dicom/current/output/chtml/part16/sect_CID_29.html"
},
{
"linkId": "imagingstudy-instance-uid",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/imagingStudy-eu-flute#ImagingStudy.series[0].instance[0].uid",
"text": "Study instance UID",
"type": "string",
"required": true,
"repeats": false
},
{
"linkId": "imagingstudy-instance-class",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/imagingStudy-eu-flute#ImagingStudy.series[0].instance[0].sopClass",
"text": "Study instance SOP Class",
"type": "choice",
"required": true,
"repeats": false,
"answerValueSet": "http://hl7.eu/fhir/ig/flute/ValueSet/VS-SOPClass"
},
{
"linkId": "imagingstudy-note",
"definition": "http://hl7.eu/fhir/ig/flute/StructureDefinition/imagingStudy-eu-flute#ImagingStudy.note.text",
"text": "Any metadata relevant to filter the dataset before ML training",
"type": "string",
"required": false,
"repeats": false
}
]
}
]
}