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Packagefhir.nwgenomics.nhs.uk
Resource TypeQuestionnaire
IdQuestionnaire-VariantReviewAskAtOrderEntry.json
FHIR VersionR4
Sourcehttps://build.fhir.org/ig/nw-gmsa/nw-gmsa.github.com/Questionnaire-VariantReviewAskAtOrderEntry.html
URLhttps://fhir.nwgenomics.nhs.uk/Questionnaire/VariantReviewAskAtOrderEntry
Version2.2.0
Statusunknown
Date2026-09-27T08:17:18+00:00
TitleGenomic Variant Review Ask At Order Entry Questions
Realmus
Authorityhl7
Description**For analysis purposes only - not an active or planned project.** **Ask At Order Entry Questions** for the NW GLH paper **Genomic Variant Review Request Form (R442.1) - Rare Disease** (DOC6004), used alongside the [common core order form](Questionnaire-GenomicTestOrder.html) - see [Order Entry Questions](Questionnaire-GenomicTestOrder.html#order-entry-questions). This form does not request a new test on a new specimen - it asks the laboratory to **re-review a variant already reported**, so its distinctive content is a reference back to that prior report rather than specimen detail.

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Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: Questionnaire VariantReviewAskAtOrderEntry

Profile: Questionnaire

Structure
LinkIDTextCardinalityTypeDescription & Constraintsdoco
.. **For analysis purposes only - not an active or planned project.** **Ask At Order Entry Questions** for the NW GLH paper **Genomic Variant Review Request Form (R442.1) - Rare Disease** (DOC6004), used alongside the [common core order form](Questionnaire-GenomicTestOrder.html) - see [Order Entry Questions](Questionnaire-GenomicTestOrder.html#order-entry-questions). This form does not request a new test on a new specimen - it asks the laboratory to **re-review a variant already reported**, so its distinctive content is a reference back to that prior report rather than specimen detail.Questionnairehttps://fhir.nwgenomics.nhs.uk/Questionnaire/VariantReviewAskAtOrderEntry#2.2.0
... PatientPatient Details0..1groupDefinition: Patient
.... LN/45394-4Surname0..1stringDefinition: Patient.name.family
.... LN/45392-8Forename0..1stringDefinition: Patient.name.given
.... LN/21112-8D.O.B.0..1dateDefinition: Patient.birthDate
.... LN/46098-0Biological Sex0..1choiceDefinition: Patient.gender
Value Set: AdministrativeGender
.... NOS/GenderIdentityGender Identity0..1string
..... NOS/GenderIdentity-designNoteNo clean FHIR field identified - distinct from Biological Sex on this form's own layout.0..1display
.... LN/56799-0Address0..*stringDefinition: Patient.address.line
.... LN/45401-7Postcode0..1stringDefinition: Patient.address.postalCode
.... LN/32624-9Ethnicity0..1choiceDefinition: Patient.extension:ethnicCategory
Value Set: Ethnicity
.... LN/89061-6NHS No0..1stringDefinition: Patient.identifier:nhsNumber
.... LN/76435-7Hospital No0..1stringDefinition: Patient.identifier:MedicalRecordNumber
... HealthcareProfessionalReferring Clinician/Healthcare Professional0..1groupDefinition: PractitionerRole
.... LN/18705-4Consultant/GP (in full)0..1stringDefinition: PractitionerRole.practitioner.display
.... HL7/ORC-21Hospital/Surgery (in full)0..1stringDefinition: PractitionerRole.organization.identifier.value
.... LN/18707-0Department0..1choiceDefinition: PractitionerRole.specialty.coding.code
Value Set: UK Core Practice Setting Code
..... LN/18707-0-designNoteDistinct from this Questionnaire's own Specialty (e.g. Core, Cardiology) item (NOS/ReviewSpecialty) below - that one is the specialty performing the review, this is the referring clinician's own department.0..1display
.... LN/89058-2E-mail/Tel0..1stringDefinition: PractitionerRole.telecom.value
.... NOS/RequestedByCcReportToRequested by/Cc. Report to0..1string
..... NOS/RequestedByCcReportTo-designNoteSame genuinely-additional-person gap identified on the GMS WGS national forms' own Main Contact group and Genomic Test Order - Common Fields We May Have Missed (Copy Report To).0..1display
... AskAtOrderEntryAsk At Order Entry Questions0..1group
.... NOS/VariantReviewReasonReason for review1..1choiceDefinition: ServiceRequest.reasonCode
Options: 4 options
..... NOS/VariantReviewReason-designNoteCovers similar ground to Reason For Variant Re-Interpretation Request in NW Genomic General Ask At Order Questions (NOS/VariantReinterpretationReason), which is a single free-text field - this form's four named reasons are kept as their own coded item rather than reused, since they are specific eligibility criteria for requesting a review, not a general free-text reason.0..1display
.... NOS/VariantsUnderReviewVariant(s) under review1..1stringDefinition: ServiceRequest.note
.... NOS/ReportReferencePrior report reference1..1referenceDefinition: ServiceRequest.basedOn
..... NOS/ReportReference-designNoteIf this variant was reported by an external GLH, please attach a copy of the report - ServiceRequest.supportingInfo -> DocumentReference -> Binary, the same pattern used for the family letter on Genetic Clinical Referral.0..1display
.... NOS/ReviewSpecialtySpecialty (e.g. Core, Cardiology)0..1stringDefinition: PractitionerRole.specialty.coding.code
.... NOS/AdditionalEvidenceAdditional evidence (new clinical or scientific information)0..1stringDefinition: ServiceRequest.note

doco Documentation for this format

Options Sets

Answer options for NOS/VariantReviewReason

  • https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA#VariantReviewReasonNewInformation
  • https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA#VariantReviewReasonTimeElapsed
  • https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA#VariantReviewReasonUrgent
  • https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA#VariantReviewReasonFormalClassification

Source1

{
  "resourceType": "Questionnaire",
  "id": "VariantReviewAskAtOrderEntry",
  "meta": {
    "profile": [
      "https://fhir.nwgenomics.nhs.uk/StructureDefinition/NWQuestionnaire"
    ]
  },
  "text": {
    "status": "extensions",
    "div": "<!-- snip (see above) -->"
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/artifact-versionAlgorithm",
      "valueCoding": {
        "system": "http://hl7.org/fhir/version-algorithm",
        "code": "semver"
      }
    }
  ],
  "url": "https://fhir.nwgenomics.nhs.uk/Questionnaire/VariantReviewAskAtOrderEntry",
  "version": "2.2.0",
  "title": "Genomic Variant Review Ask At Order Entry Questions",
  "status": "unknown",
  "date": "2026-09-27T08:17:18+00:00",
  "publisher": "NHS North West Genomics",
  "contact": [
    {
      "telecom": [
        {
          "system": "url",
          "value": "https://www.nwgenomics.nhs.uk/contact-us"
        }
      ]
    }
  ],
  "description": "**For analysis purposes only - not an active or planned project.**\n\n**Ask At Order Entry Questions** for the NW GLH paper **Genomic Variant\nReview Request Form (R442.1) - Rare Disease** (DOC6004), used alongside the\n[common core order form](Questionnaire-GenomicTestOrder.html) - see [Order\nEntry Questions](Questionnaire-GenomicTestOrder.html#order-entry-questions).\nThis form does not request a new test on a new specimen - it asks the\nlaboratory to **re-review a variant already reported**, so its distinctive\ncontent is a reference back to that prior report rather than specimen\ndetail.",
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "urn:iso:std:iso:3166",
          "code": "GB",
          "display": "United Kingdom of Great Britain and Northern Ireland"
        }
      ]
    }
  ],
  "item": [
    {
      "linkId": "Patient",
      "definition": "http://hl7.org/fhir/StructureDefinition/Patient#Patient",
      "text": "Patient Details",
      "type": "group",
      "item": [
        {
          "linkId": "LN/45394-4",
          "definition": "http://hl7.org/fhir/StructureDefinition/Patient#Patient.name.family",
          "code": [
            {
              "system": "http://loinc.org",
              "code": "45394-4"
            }
          ],
          "text": "Surname",
          "type": "string"
        },
        {
          "linkId": "LN/45392-8",
          "definition": "http://hl7.org/fhir/StructureDefinition/Patient#Patient.name.given",
          "code": [
            {
              "system": "http://loinc.org",
              "code": "45392-8"
            }
          ],
          "text": "Forename",
          "type": "string"
        },
        {
          "linkId": "LN/21112-8",
          "definition": "http://hl7.org/fhir/StructureDefinition/Patient#Patient.birthDate",
          "code": [
            {
              "system": "http://loinc.org",
              "code": "21112-8"
            }
          ],
          "text": "D.O.B.",
          "type": "date"
        },
        {
          "linkId": "LN/46098-0",
          "definition": "http://hl7.org/fhir/StructureDefinition/Patient#Patient.gender",
          "code": [
            {
              "system": "http://loinc.org",
              "code": "46098-0"
            }
          ],
          "text": "Biological Sex",
          "type": "choice",
          "answerValueSet": "http://hl7.org/fhir/ValueSet/administrative-gender"
        },
        {
          "linkId": "NOS/GenderIdentity",
          "text": "Gender Identity",
          "type": "string",
          "item": [
            {
              "extension": [
                {
                  "url": "http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl",
                  "valueCodeableConcept": {
                    "coding": [
                      {
                        "system": "http://hl7.org/fhir/questionnaire-item-control",
                        "code": "help"
                      }
                    ]
                  }
                }
              ],
              "linkId": "NOS/GenderIdentity-designNote",
              "text": "No clean FHIR field identified - distinct from Biological Sex on this form's own layout.",
              "type": "display"
            }
          ]
        },
        {
          "linkId": "LN/56799-0",
          "definition": "http://hl7.org/fhir/StructureDefinition/Patient#Patient.address.line",
          "code": [
            {
              "system": "http://loinc.org",
              "code": "56799-0"
            }
          ],
          "text": "Address",
          "type": "string",
          "repeats": true
        },
        {
          "linkId": "LN/45401-7",
          "definition": "http://hl7.org/fhir/StructureDefinition/Patient#Patient.address.postalCode",
          "code": [
            {
              "system": "http://loinc.org",
              "code": "45401-7"
            }
          ],
          "text": "Postcode",
          "type": "string"
        },
        {
          "linkId": "LN/32624-9",
          "definition": "http://hl7.org/fhir/StructureDefinition/Patient#Patient.extension:ethnicCategory",
          "code": [
            {
              "system": "http://loinc.org",
              "code": "32624-9"
            }
          ],
          "text": "Ethnicity",
          "type": "choice",
          "answerValueSet": "https://fhir.nwgenomics.nhs.uk/ValueSet/ethnicity"
        },
        {
          "linkId": "LN/89061-6",
          "definition": "http://hl7.org/fhir/StructureDefinition/Patient#Patient.identifier:nhsNumber",
          "code": [
            {
              "system": "http://loinc.org",
              "code": "89061-6"
            }
          ],
          "text": "NHS No",
          "type": "string"
        },
        {
          "linkId": "LN/76435-7",
          "definition": "http://hl7.org/fhir/StructureDefinition/Patient#Patient.identifier:MedicalRecordNumber",
          "code": [
            {
              "system": "http://loinc.org",
              "code": "76435-7"
            }
          ],
          "text": "Hospital No",
          "type": "string"
        }
      ]
    },
    {
      "linkId": "HealthcareProfessional",
      "definition": "http://hl7.org/fhir/StructureDefinition/PractitionerRole#PractitionerRole",
      "text": "Referring Clinician/Healthcare Professional",
      "type": "group",
      "item": [
        {
          "linkId": "LN/18705-4",
          "definition": "http://hl7.org/fhir/StructureDefinition/PractitionerRole#PractitionerRole.practitioner.display",
          "code": [
            {
              "system": "http://loinc.org",
              "code": "18705-4"
            }
          ],
          "text": "Consultant/GP (in full)",
          "type": "string"
        },
        {
          "linkId": "HL7/ORC-21",
          "definition": "http://hl7.org/fhir/StructureDefinition/PractitionerRole#PractitionerRole.organization.identifier.value",
          "text": "Hospital/Surgery (in full)",
          "type": "string"
        },
        {
          "linkId": "LN/18707-0",
          "definition": "http://hl7.org/fhir/StructureDefinition/PractitionerRole#PractitionerRole.specialty.coding.code",
          "code": [
            {
              "system": "http://loinc.org",
              "code": "18707-0"
            }
          ],
          "text": "Department",
          "type": "choice",
          "answerValueSet": "https://fhir.hl7.org.uk/ValueSet/UKCore-PracticeSettingCode",
          "item": [
            {
              "extension": [
                {
                  "url": "http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl",
                  "valueCodeableConcept": {
                    "coding": [
                      {
                        "system": "http://hl7.org/fhir/questionnaire-item-control",
                        "code": "help"
                      }
                    ]
                  }
                }
              ],
              "linkId": "LN/18707-0-designNote",
              "text": "Distinct from this Questionnaire's own Specialty (e.g. Core, Cardiology) item (NOS/ReviewSpecialty) below - that one is the specialty performing the review, this is the referring clinician's own department.",
              "type": "display"
            }
          ]
        },
        {
          "linkId": "LN/89058-2",
          "definition": "http://hl7.org/fhir/StructureDefinition/PractitionerRole#PractitionerRole.telecom.value",
          "code": [
            {
              "system": "http://loinc.org",
              "code": "89058-2",
              "display": "Contact email address"
            }
          ],
          "text": "E-mail/Tel",
          "type": "string"
        },
        {
          "linkId": "NOS/RequestedByCcReportTo",
          "text": "Requested by/Cc. Report to",
          "type": "string",
          "item": [
            {
              "extension": [
                {
                  "url": "http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl",
                  "valueCodeableConcept": {
                    "coding": [
                      {
                        "system": "http://hl7.org/fhir/questionnaire-item-control",
                        "code": "help"
                      }
                    ]
                  }
                }
              ],
              "linkId": "NOS/RequestedByCcReportTo-designNote",
              "text": "Same genuinely-additional-person gap identified on the GMS WGS national forms' own Main Contact group and Genomic Test Order - Common Fields We May Have Missed (Copy Report To).",
              "type": "display"
            }
          ]
        }
      ]
    },
    {
      "linkId": "AskAtOrderEntry",
      "text": "Ask At Order Entry Questions",
      "type": "group",
      "item": [
        {
          "linkId": "NOS/VariantReviewReason",
          "definition": "http://hl7.org/fhir/StructureDefinition/ServiceRequest#ServiceRequest.reasonCode",
          "text": "Reason for review",
          "type": "choice",
          "required": true,
          "answerOption": [
            {
              "valueCoding": {
                "system": "https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA",
                "code": "VariantReviewReasonNewInformation"
              }
            },
            {
              "valueCoding": {
                "system": "https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA",
                "code": "VariantReviewReasonTimeElapsed"
              }
            },
            {
              "valueCoding": {
                "system": "https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA",
                "code": "VariantReviewReasonUrgent"
              }
            },
            {
              "valueCoding": {
                "system": "https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA",
                "code": "VariantReviewReasonFormalClassification"
              }
            }
          ],
          "item": [
            {
              "extension": [
                {
                  "url": "http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl",
                  "valueCodeableConcept": {
                    "coding": [
                      {
                        "system": "http://hl7.org/fhir/questionnaire-item-control",
                        "code": "help"
                      }
                    ]
                  }
                }
              ],
              "linkId": "NOS/VariantReviewReason-designNote",
              "text": "Covers similar ground to Reason For Variant Re-Interpretation Request in NW Genomic General Ask At Order Questions (NOS/VariantReinterpretationReason), which is a single free-text field - this form's four named reasons are kept as their own coded item rather than reused, since they are specific eligibility criteria for requesting a review, not a general free-text reason.",
              "type": "display"
            }
          ]
        },
        {
          "linkId": "NOS/VariantsUnderReview",
          "definition": "http://hl7.org/fhir/StructureDefinition/ServiceRequest#ServiceRequest.note",
          "text": "Variant(s) under review",
          "type": "string",
          "required": true
        },
        {
          "extension": [
            {
              "url": "http://hl7.org/fhir/StructureDefinition/questionnaire-referenceProfile",
              "valueCanonical": "http://hl7.org/fhir/StructureDefinition/DiagnosticReport"
            }
          ],
          "linkId": "NOS/ReportReference",
          "definition": "http://hl7.org/fhir/StructureDefinition/ServiceRequest#ServiceRequest.basedOn",
          "code": [
            {
              "system": "https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA",
              "code": "ReportReference"
            }
          ],
          "text": "Prior report reference",
          "type": "reference",
          "required": true,
          "item": [
            {
              "extension": [
                {
                  "url": "http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl",
                  "valueCodeableConcept": {
                    "coding": [
                      {
                        "system": "http://hl7.org/fhir/questionnaire-item-control",
                        "code": "help"
                      }
                    ]
                  }
                }
              ],
              "linkId": "NOS/ReportReference-designNote",
              "text": "If this variant was reported by an external GLH, please attach a copy of the report - ServiceRequest.supportingInfo -> DocumentReference -> Binary, the same pattern used for the family letter on Genetic Clinical Referral.",
              "type": "display"
            }
          ]
        },
        {
          "linkId": "NOS/ReviewSpecialty",
          "definition": "http://hl7.org/fhir/StructureDefinition/PractitionerRole#PractitionerRole.specialty.coding.code",
          "text": "Specialty (e.g. Core, Cardiology)",
          "type": "string"
        },
        {
          "linkId": "NOS/AdditionalEvidence",
          "definition": "http://hl7.org/fhir/StructureDefinition/ServiceRequest#ServiceRequest.note",
          "text": "Additional evidence (new clinical or scientific information)",
          "type": "string"
        }
      ]
    }
  ]
}