FHIR © HL7.org  |  FHIRsmith 4.0.1  |  Server Home  |  XIG Home  |  XIG Stats  | 

FHIR IG analytics

Packagefhir.nwgenomics.nhs.uk
Resource TypeQuestionnaire
IdQuestionnaire-GenomicGeneralAskAtOrderEntry.json
FHIR VersionR4
Sourcehttps://build.fhir.org/ig/nw-gmsa/nw-gmsa.github.com/Questionnaire-GenomicGeneralAskAtOrderEntry.html
URLhttps://fhir.nwgenomics.nhs.uk/Questionnaire/GenomicGeneralAskAtOrderEntry
Version2.2.0
Statusactive
Date2026-09-27T08:17:18+00:00
TitleNW Genomic General Ask At Order Questions
Realmus
Authorityhl7
Description**Ask At Order Entry Questions Common** - the default set used alongside the [common core order form](Questionnaire-GenomicTestOrder.html) for order/test types that do not have their own dedicated Ask At Order Entry Questionnaire - see [Order Entry Questions](Questionnaire-GenomicTestOrder.html#order-entry-questions). These questions were originally part of [GenomicTestOrder](Questionnaire-GenomicTestOrder.html) and have been extracted here so the core form stays generic to every order/test type. Covers Cancer, Whole Genome Sequencing (WGS) and Rare and Inherited Disease orders generally - see [Guidance by Order Type](#guidance-by-order-type) below for which questions actually apply to which. Questions only relevant to WGS specifically (`Related Individual (NK1)`, `Record of Discussion attached or to follow`) have moved to [WGS Test Additional Ask At Order Entry Questions](Questionnaire-WGSTestAdditionalAskAtOrderQuestions.html), used *alongside* this Questionnaire for WGS orders, not instead of it.

Resources that use this resource

No resources found


Resources that this resource uses

No resources found


Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: Questionnaire GenomicGeneralAskAtOrderEntry

Profile: Questionnaire

Structure
LinkIDTextCardinalityTypeDescription & Constraintsdoco
.. **Ask At Order Entry Questions Common** - the default set used alongside the [common core order form](Questionnaire-GenomicTestOrder.html) for order/test types that do not have their own dedicated Ask At Order Entry Questionnaire - see [Order Entry Questions](Questionnaire-GenomicTestOrder.html#order-entry-questions). These questions were originally part of [GenomicTestOrder](Questionnaire-GenomicTestOrder.html) and have been extracted here so the core form stays generic to every order/test type. Covers Cancer, Whole Genome Sequencing (WGS) and Rare and Inherited Disease orders generally - see [Guidance by Order Type](#guidance-by-order-type) below for which questions actually apply to which. Questions only relevant to WGS specifically (`Related Individual (NK1)`, `Record of Discussion attached or to follow`) have moved to [WGS Test Additional Ask At Order Entry Questions](Questionnaire-WGSTestAdditionalAskAtOrderQuestions.html), used *alongside* this Questionnaire for WGS orders, not instead of it.Questionnairehttps://fhir.nwgenomics.nhs.uk/Questionnaire/GenomicGeneralAskAtOrderEntry#2.2.0
... AskAtOrderEntryAsk At Order Entry Questions0..1group
.... SNM/281269004High Infection Risk?0..1choiceDefinition: Observation.valueCodeableConcept
Options: 2 options
.... NOS/InfectionRiskDetailsHigh infection Risk Details0..1stringDefinition: Observation.valueString
.... ConsentConsent0..1group
..... LN/19826-7Has consent has been obtained for tests (Y/N)0..1choiceDefinition: Observation.valueCodeableConcept
Options: 2 options
..... LN/75520-7Has consent has been obtained for DNA storage (Y/N)0..1choiceDefinition: Observation.valueCodeableConcept
Options: 2 options
.... pedigreeNumberG Number (Pedigree Number)0..1stringDefinition: Observation.valueString
..... pedigreeNumber-designNoteUseful for Duo/Trio orders, to record the shared pedigree/family group these related orders belong to. Moved here from Genomic Test Order (where it was wrongly mapped to Patient.identifier:PedigreeNumber, implying it was a formal Patient identifier) - NHS England's own Genomics Pedigree Number naming system (https://fhir.nhs.uk/Id/genomics-pedigree-number) describes this as a patient's genetic/pedigree number which links their family, and their own FHIR Genomics Implementation Guide has since moved its own equivalent mapping to a Group resource. Not an Order Group Number (ServiceRequest.requisition) - see WholeGenomicSequence.html for that distinction. Modelled here simply as an Observation.valueString pending a decision on whether a more structured representation (e.g. Group) is needed.0..1display
.... SNM/842009Patient is from consanguineous union?0..1choiceDefinition: Observation.valueCodeableConcept
Options: 3 options
.... SNM/74996004-pathology-reportConfirm that a pathology report will be provided alongside the sample.0..1choiceDefinition: Observation.valueCodeableConcept
Options: 3 options
.... SNM/118185001Neonatal/Prenatal/Neither?0..1choiceDefinition: Observation.valueCodeableConcept
Options: 3 options
..... pregnantPregnant0..1groupEnable When: SNM/118185001 = Pregnancy (SNOMED CT#77386006)
...... SNM/370386005Does this test relate to a pregnancy with > 1 fetus?0..1stringDefinition: Observation.valueCodeableConcept
Options: 3 options
...... SNM/161714006Patient expected delivery date0..1dateDefinition: Observation.valueDateTime
...... SNM/598151000005105Patient gestation0..1integerDefinition: Observation.valueQuantity
.... SNM/17369002Is this test for a pregnancy loss?0..1choiceDefinition: Observation.valueCodeableConcept
Options: 3 options
.... SNM/419099009Is this test for a deceased infant?0..1choiceDefinition: Observation.valueCodeableConcept
Options: 3 options
.... NOS/VariantReinterpretationReasonReason For Variant Re-Interpretation Request0..1stringDefinition: Observation.valueString

doco Documentation for this format

Options Sets

Answer options for SNM/281269004

  • http://loinc.org#LA33-6 ("Yes")
  • http://loinc.org#LA32-8 ("No")

Answer options for LN/19826-7

  • http://loinc.org#LA33-6 ("Yes")
  • http://loinc.org#LA32-8 ("No")

Answer options for LN/75520-7

  • http://loinc.org#LA33-6 ("Yes")
  • http://loinc.org#LA32-8 ("No")

Answer options for SNM/842009

  • http://loinc.org#LA33-6 ("Yes")
  • http://loinc.org#LA32-8 ("No")
  • http://loinc.org#LA4489-6 ("Unknown")

Answer options for SNM/74996004-pathology-report

  • http://loinc.org#LA33-6 ("Yes")
  • http://loinc.org#LA32-8 ("No")
  • http://loinc.org#LA4489-6 ("Unknown")

Answer options for SNM/118185001

  • http://snomed.info/sct#77386006 ("Pregnancy")
  • http://snomed.info/sct#255407002 ("Neonatal")
  • http://loinc.org#LA32-8 ("No")

Answer options for SNM/370386005

  • http://loinc.org#LA33-6 ("Yes")
  • http://loinc.org#LA32-8 ("No")
  • http://loinc.org#LA4489-6 ("Unknown")

Answer options for SNM/17369002

  • http://loinc.org#LA33-6 ("Yes")
  • http://loinc.org#LA32-8 ("No")
  • http://loinc.org#LA4489-6 ("Unknown")

Answer options for SNM/419099009

  • http://loinc.org#LA33-6 ("Yes")
  • http://loinc.org#LA32-8 ("No")
  • http://loinc.org#LA4489-6 ("Unknown")

Source1

{
  "resourceType": "Questionnaire",
  "id": "GenomicGeneralAskAtOrderEntry",
  "meta": {
    "profile": [
      "https://fhir.nwgenomics.nhs.uk/StructureDefinition/NWQuestionnaire"
    ]
  },
  "text": {
    "status": "extensions",
    "div": "<!-- snip (see above) -->"
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/artifact-versionAlgorithm",
      "valueCoding": {
        "system": "http://hl7.org/fhir/version-algorithm",
        "code": "semver"
      }
    }
  ],
  "url": "https://fhir.nwgenomics.nhs.uk/Questionnaire/GenomicGeneralAskAtOrderEntry",
  "version": "2.2.0",
  "title": "NW Genomic General Ask At Order Questions",
  "derivedFrom": [
    "https://fhir.nwgenomics.nhs.uk/Questionnaire/GenomicTestOrder"
  ],
  "_derivedFrom": [
    {
      "extension": [
        {
          "url": "http://hl7.org/fhir/StructureDefinition/questionnaire-derivationType",
          "valueCoding": {
            "system": "http://hl7.org/fhir/questionnaire-derivationType",
            "code": "extends"
          }
        }
      ]
    }
  ],
  "status": "active",
  "date": "2026-09-27T08:17:18+00:00",
  "publisher": "NHS North West Genomics",
  "contact": [
    {
      "telecom": [
        {
          "system": "url",
          "value": "https://www.nwgenomics.nhs.uk/contact-us"
        }
      ]
    }
  ],
  "description": "**Ask At Order Entry Questions Common** - the default set used alongside the\n[common core order form](Questionnaire-GenomicTestOrder.html) for order/test\ntypes that do not have their own dedicated Ask At Order Entry Questionnaire -\nsee [Order Entry Questions](Questionnaire-GenomicTestOrder.html#order-entry-questions).\nThese questions were originally part of [GenomicTestOrder](Questionnaire-GenomicTestOrder.html)\nand have been extracted here so the core form stays generic to every order/test type.\n\nCovers Cancer, Whole Genome Sequencing (WGS) and Rare and Inherited Disease\norders generally - see [Guidance by Order Type](#guidance-by-order-type)\nbelow for which questions actually apply to which. Questions only relevant\nto WGS specifically (`Related Individual (NK1)`, `Record of Discussion\nattached or to follow`) have moved to [WGS Test Additional Ask At Order\nEntry Questions](Questionnaire-WGSTestAdditionalAskAtOrderQuestions.html),\nused *alongside* this Questionnaire for WGS orders, not instead of it.",
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "urn:iso:std:iso:3166",
          "code": "GB",
          "display": "United Kingdom of Great Britain and Northern Ireland"
        }
      ]
    }
  ],
  "item": [
    {
      "linkId": "AskAtOrderEntry",
      "text": "Ask At Order Entry Questions",
      "type": "group",
      "item": [
        {
          "linkId": "SNM/281269004",
          "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueCodeableConcept",
          "code": [
            {
              "system": "http://snomed.info/sct",
              "code": "281269004",
              "display": "High infection risk sample"
            }
          ],
          "text": "High Infection Risk?",
          "type": "choice",
          "required": false,
          "repeats": false,
          "answerOption": [
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA33-6",
                "display": "Yes"
              }
            },
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA32-8",
                "display": "No"
              }
            }
          ]
        },
        {
          "linkId": "NOS/InfectionRiskDetails",
          "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueString",
          "code": [
            {
              "system": "https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA",
              "code": "InfectionRiskDetails"
            }
          ],
          "text": "High infection Risk Details",
          "type": "string"
        },
        {
          "linkId": "Consent",
          "text": "Consent",
          "type": "group",
          "item": [
            {
              "linkId": "LN/19826-7",
              "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueCodeableConcept",
              "code": [
                {
                  "system": "http://snomed.info/sct",
                  "code": "309370004",
                  "display": "Consent status"
                },
                {
                  "system": "http://loinc.org",
                  "code": "19826-7",
                  "display": "Informed consent obtained"
                },
                {
                  "system": "http://loinc.org",
                  "code": "59284-0",
                  "display": "Consent Document"
                }
              ],
              "text": "Has consent has been obtained for tests (Y/N)",
              "type": "choice",
              "answerOption": [
                {
                  "valueCoding": {
                    "system": "http://loinc.org",
                    "code": "LA33-6",
                    "display": "Yes"
                  }
                },
                {
                  "valueCoding": {
                    "system": "http://loinc.org",
                    "code": "LA32-8",
                    "display": "No"
                  }
                }
              ]
            },
            {
              "linkId": "LN/75520-7",
              "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueCodeableConcept",
              "code": [
                {
                  "system": "http://loinc.org",
                  "code": "75520-7",
                  "display": "Biobank specimens are stored and available for research"
                }
              ],
              "text": "Has consent has been obtained for DNA storage (Y/N)",
              "type": "choice",
              "answerOption": [
                {
                  "valueCoding": {
                    "system": "http://loinc.org",
                    "code": "LA33-6",
                    "display": "Yes"
                  }
                },
                {
                  "valueCoding": {
                    "system": "http://loinc.org",
                    "code": "LA32-8",
                    "display": "No"
                  }
                }
              ]
            }
          ]
        },
        {
          "linkId": "pedigreeNumber",
          "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueString",
          "code": [
            {
              "system": "http://loinc.org",
              "code": "74027-4",
              "display": "Family pedigree identifier"
            }
          ],
          "text": "G Number (Pedigree Number)",
          "type": "string",
          "item": [
            {
              "extension": [
                {
                  "url": "http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl",
                  "valueCodeableConcept": {
                    "coding": [
                      {
                        "system": "http://hl7.org/fhir/questionnaire-item-control",
                        "code": "help"
                      }
                    ]
                  }
                }
              ],
              "linkId": "pedigreeNumber-designNote",
              "text": "Useful for Duo/Trio orders, to record the shared pedigree/family group these\nrelated orders belong to. Moved here from Genomic Test Order (where it was\nwrongly mapped to Patient.identifier:PedigreeNumber, implying it was a formal\nPatient identifier) - NHS England's own Genomics Pedigree Number naming system\n(https://fhir.nhs.uk/Id/genomics-pedigree-number) describes this as a patient's\ngenetic/pedigree number which links their family, and their own FHIR Genomics\nImplementation Guide has since moved its own equivalent mapping to a Group\nresource. Not an Order Group Number (ServiceRequest.requisition) - see\nWholeGenomicSequence.html for that distinction. Modelled here simply as an\nObservation.valueString pending a decision on whether a more structured\nrepresentation (e.g. Group) is needed.",
              "type": "display"
            }
          ]
        },
        {
          "linkId": "SNM/842009",
          "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueCodeableConcept",
          "code": [
            {
              "system": "http://snomed.info/sct",
              "code": "842009",
              "display": "Consanguinity"
            }
          ],
          "text": "Patient is from consanguineous union?",
          "type": "choice",
          "answerOption": [
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA33-6",
                "display": "Yes"
              }
            },
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA32-8",
                "display": "No"
              }
            },
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA4489-6",
                "display": "Unknown"
              }
            }
          ]
        },
        {
          "linkId": "SNM/74996004-pathology-report",
          "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueCodeableConcept",
          "code": [
            {
              "system": "http://snomed.info/sct",
              "code": "74996004",
              "display": "Confirmation of"
            }
          ],
          "text": "Confirm that a pathology report will be provided alongside the sample.",
          "type": "choice",
          "answerOption": [
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA33-6",
                "display": "Yes"
              }
            },
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA32-8",
                "display": "No"
              }
            },
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA4489-6",
                "display": "Unknown"
              }
            }
          ]
        },
        {
          "linkId": "SNM/118185001",
          "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueCodeableConcept",
          "code": [
            {
              "system": "http://snomed.info/sct",
              "code": "118185001",
              "display": "Finding related to pregnancy"
            }
          ],
          "text": "Neonatal/Prenatal/Neither?",
          "type": "choice",
          "answerOption": [
            {
              "valueCoding": {
                "system": "http://snomed.info/sct",
                "code": "77386006",
                "display": "Pregnancy"
              }
            },
            {
              "valueCoding": {
                "system": "http://snomed.info/sct",
                "code": "255407002",
                "display": "Neonatal"
              }
            },
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA32-8",
                "display": "No"
              }
            }
          ],
          "item": [
            {
              "linkId": "pregnant",
              "text": "Pregnant",
              "type": "group",
              "enableWhen": [
                {
                  "question": "SNM/118185001",
                  "operator": "=",
                  "answerCoding": {
                    "system": "http://snomed.info/sct",
                    "code": "77386006"
                  }
                }
              ],
              "item": [
                {
                  "linkId": "SNM/370386005",
                  "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueCodeableConcept",
                  "code": [
                    {
                      "system": "http://snomed.info/sct",
                      "code": "370386005",
                      "display": "Ultrasound scan - multiple fetus"
                    }
                  ],
                  "text": "Does this test relate to a pregnancy with > 1 fetus?",
                  "type": "string",
                  "answerOption": [
                    {
                      "valueCoding": {
                        "system": "http://loinc.org",
                        "code": "LA33-6",
                        "display": "Yes"
                      }
                    },
                    {
                      "valueCoding": {
                        "system": "http://loinc.org",
                        "code": "LA32-8",
                        "display": "No"
                      }
                    },
                    {
                      "valueCoding": {
                        "system": "http://loinc.org",
                        "code": "LA4489-6",
                        "display": "Unknown"
                      }
                    }
                  ]
                },
                {
                  "linkId": "SNM/161714006",
                  "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueDateTime",
                  "code": [
                    {
                      "system": "http://snomed.info/sct",
                      "code": "161714006",
                      "display": "Estimated date of delivery"
                    }
                  ],
                  "text": "Patient expected delivery date",
                  "type": "date"
                },
                {
                  "extension": [
                    {
                      "url": "http://hl7.org/fhir/StructureDefinition/questionnaire-unit",
                      "valueCoding": {
                        "system": "http://unitsofmeasure.org",
                        "code": "wk",
                        "display": "Wk"
                      }
                    }
                  ],
                  "linkId": "SNM/598151000005105",
                  "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueQuantity",
                  "code": [
                    {
                      "system": "http://snomed.info/sct",
                      "code": "57036006",
                      "display": "Fetal gestational age"
                    }
                  ],
                  "text": "Patient gestation",
                  "type": "integer"
                }
              ]
            }
          ]
        },
        {
          "linkId": "SNM/17369002",
          "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueCodeableConcept",
          "code": [
            {
              "system": "http://snomed.info/sct",
              "code": "17369002",
              "display": "Miscarriage"
            }
          ],
          "text": "Is this test for a pregnancy loss?",
          "type": "choice",
          "answerOption": [
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA33-6",
                "display": "Yes"
              }
            },
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA32-8",
                "display": "No"
              }
            },
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA4489-6",
                "display": "Unknown"
              }
            }
          ]
        },
        {
          "linkId": "SNM/419099009",
          "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueCodeableConcept",
          "code": [
            {
              "system": "http://snomed.info/sct",
              "code": "419099009",
              "display": "Dead"
            }
          ],
          "text": "Is this test for a deceased infant?",
          "type": "choice",
          "answerOption": [
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA33-6",
                "display": "Yes"
              }
            },
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA32-8",
                "display": "No"
              }
            },
            {
              "valueCoding": {
                "system": "http://loinc.org",
                "code": "LA4489-6",
                "display": "Unknown"
              }
            }
          ]
        },
        {
          "linkId": "NOS/VariantReinterpretationReason",
          "definition": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.valueString",
          "code": [
            {
              "system": "https://fhir.nwgenomics.nhs.uk/CodeSystem/NWGMSA",
              "code": "VariantReinterpretationReason"
            }
          ],
          "text": "Reason For Variant Re-Interpretation Request",
          "type": "string"
        }
      ]
    }
  ]
}