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Packagefhir.nwgenomics.nhs.uk
Resource TypeExampleScenario
IdExampleScenario-GenomicTestReportProcess.json
FHIR VersionR4
Sourcehttps://build.fhir.org/ig/nw-gmsa/nw-gmsa.github.com/ExampleScenario-GenomicTestReportProcess.html
URLhttps://fhir.nwgenomics.nhs.uk/ExampleScenario/GenomicTestReportProcess
Version0.1.0
Statusdraft
Date2026-02-10T04:20:28+00:00
NameGenomic Test Report
Realmus
Authorityhl7

Resources that use this resource

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Resources that this resource uses

No resources found


Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: ExampleScenario GenomicTestReportProcess

url: Genomic Test Report

version: 0.1.0

name: Genomic Test Report

status: Draft

date: 2026-02-10 04:20:28+0000

publisher: NHS North West Genomics

contact: https://www.nwgenomics.nhs.uk/contact-us

jurisdiction: United Kingdom of Great Britain and Northern Ireland

actor

actorId: filler

type: System

name: Order Filler

description:

actor

actorId: rie

type: System

name: Regional Integration Engine

description:

actor

actorId: tie

type: System

name: Trust Integration Engine

description:

actor

actorId: epr

type: System

name: Order Placer/Electronic Patient Record

description:

actor

actorId: hie

type: System

name: ICS - Health Information Exchange

description:

Intermediary found in LHCRE/ICS

actor

actorId: cdr

type: System

name: Regional - Genomic Data Repository

description:

Clinical Data Repository

instance

resourceId: Request1

resourceType: Binary

name: HL7 v2 ORU_R01 - supplier

description:

instance

resourceId: Request2

resourceType: Binary

name: HL7 v2 ORU_R01 - regional

description:

instance

resourceId: Request7

resourceType: Binary

name: HL7 v2 ORU_R01 - supplier

instance

resourceId: Request4

resourceType: Binary

name: Search for master Patient demographics record

description:

Query for Patient: GET https://example.nhs.uk/FHIR/R4/Patient?identifier=https://fhir.nhs.uk/Id/nhs-number|9449305552

instance

resourceId: Reply4

resourceType: Bundle

name: Search results

version

Extension Definition for ExampleScenario.instance.version.title for Version 5.0: Search Results

Extension Definition for ExampleScenario.instance.version.content for Version 5.0: Bundle: type = searchset; total = 1

versionId: 4

instance

resourceId: Request5

resourceType: Binary

name: HL7 v2 MDM_T02 - regional

description:

Regional Hl7 v2 MDM_T02 The format of the report is PDF, in future for England/EU document sharing the format may change to HL7 EU Laboratory Report

instance

resourceId: Request6

resourceType: Bundle

name: HL7 FHIR Message R01 - regional

version

Extension Definition for ExampleScenario.instance.version.title for Version 5.0: HL7 FHIR Message R01

Extension Definition for ExampleScenario.instance.version.content for Version 5.0: Bundle: identifier = UUID:9612365d-52a4-4fab-87e7-8a09d753f095; type = message; timestamp = 2024-10-13 10:33:00+0000

versionId: 6

process

title: Send Report to Order Placer

description:

The report is sent from the LIMS using HL7 ORU_R01 and this is sent to the Order Placer/EPR via middleware

preConditions:

Test Order has been received (Genomic Test Order Process), specimen has been collected (e.g. Biopsy Procedure), has physically arrived and the test(s) have been performed

step

operation

number: 1

type: create

name: Send Laboratory Report ORU_R01 v2

initiator: filler

receiver: rie

description:

TODO

Requests

-ResourceId
*Request1

step

operation

number: 2

type: create

name: Send Laboratory Report ORU_R01 v2

initiator: rie

receiver: tie

description:

Routes the report to NHS Trust which placed the order. At present the report will only be sent to regional NHS Trusts, in future this will include the NHS England Genomic Order Management Service to deliver reports to other NHS Trusts

Requests

-ResourceId
*Request2

step

operation

number: 7

type: create

name: Send Laboratory Report ORU_R01 v2

initiator: tie

receiver: epr

description:

Routes the report to the Order Placer and/or EPR

Requests

-ResourceId
*Request7

process

title: Send Report to ICS

description:

The report to ICS HL7 MDM_T02. The report is routed to the ICS based on which general practice the patient is registered with

preConditions:

Patient has a NHS Number

step

operation

number: 4

type: search-type

name: Patient Demographics Query

initiator: rie

receiver: cdr

description:

This is an internal API which includes use of NHS England Personal Demographics Service

Requests

-ResourceId
*Request4

Responses

-ResourceId
*Reply4

step

operation

number: 5

type: create

name: Send Laboratory Report MDM_T02 v2

initiator: rie

receiver: hie

description:

The report is routed to the ICS system which covers the Patients GP Surgery. For IHE XDS destinations this may include conversion to IHE ITI-41

Requests

-ResourceId
*Request5

process

title: Send Report to Regional Genomic CDR

description:

The report is sent to the regional Clinical Data Repository which shares the report using FHIR RESTful readonly APIs

step

operation

number: 6

type: create

name: Send Laboratory Report R01 FHIR

initiator: rie

receiver: cdr

description:

The v2 message is transformed to a FHIR Message

Requests

-ResourceId
*Request6

Source1

{
  "resourceType": "ExampleScenario",
  "id": "GenomicTestReportProcess",
  "text": {
    "status": "extensions",
    "div": "<!-- snip (see above) -->"
  },
  "url": "https://fhir.nwgenomics.nhs.uk/ExampleScenario/GenomicTestReportProcess",
  "version": "0.1.0",
  "name": "Genomic Test Report",
  "status": "draft",
  "date": "2026-02-10T04:20:28+00:00",
  "publisher": "NHS North West Genomics",
  "contact": [
    {
      "telecom": [
        {
          "system": "url",
          "value": "https://www.nwgenomics.nhs.uk/contact-us"
        }
      ]
    }
  ],
  "jurisdiction": [
    {
      "coding": [
        {
          "system": "urn:iso:std:iso:3166",
          "code": "GB",
          "display": "United Kingdom of Great Britain and Northern Ireland"
        }
      ]
    }
  ],
  "actor": [
    {
      "actorId": "filler",
      "type": "entity",
      "name": "Order Filler",
      "description": " [Order Filler](ActorDefinition-OrderFiller.html) "
    },
    {
      "actorId": "rie",
      "type": "entity",
      "name": "Regional Integration Engine",
      "description": " [Intermediary](ActorDefinition-Intermediary.html) "
    },
    {
      "actorId": "tie",
      "type": "entity",
      "name": "Trust Integration Engine",
      "description": " [Intermediary](ActorDefinition-Intermediary.html) "
    },
    {
      "actorId": "epr",
      "type": "entity",
      "name": "Order Placer/Electronic Patient Record",
      "description": " NHS Trust [Provider Information Source](ActorDefinition-ProviderInformationSource.html) "
    },
    {
      "actorId": "hie",
      "type": "entity",
      "name": "ICS - Health Information Exchange",
      "description": "  [Intermediary](ActorDefinition-Intermediary.html) found in LHCRE/ICS "
    },
    {
      "actorId": "cdr",
      "type": "entity",
      "name": "Regional - Genomic Data Repository",
      "description": " Clinical Data Repository "
    }
  ],
  "instance": [
    {
      "resourceId": "Request1",
      "resourceType": "Binary",
      "name": "HL7 v2 ORU_R01 - supplier",
      "description": " [iGene HL7 v2 ORU_R01](hl7v2.html#original-igene-message) "
    },
    {
      "resourceId": "Request2",
      "resourceType": "Binary",
      "name": "HL7 v2 ORU_R01 - regional",
      "description": " [Regional HL7 v2 ORU_R01](hl7v2.html#oru_r01-unsolicited-transmission-of-an-observation-message-1) "
    },
    {
      "resourceId": "Request7",
      "resourceType": "Binary",
      "name": "HL7 v2 ORU_R01 - supplier"
    },
    {
      "resourceId": "Request4",
      "resourceType": "Binary",
      "name": "Search for master Patient demographics record",
      "description": "Query for Patient: `GET https://example.nhs.uk/FHIR/R4/Patient?identifier=https://fhir.nhs.uk/Id/nhs-number|9449305552`"
    },
    {
      "resourceId": "Reply4",
      "resourceType": "Bundle",
      "name": "Search results",
      "version": [
        {
          "extension": [
            {
              "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ExampleScenario.instance.version.title",
              "valueString": "Search Results"
            },
            {
              "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ExampleScenario.instance.version.content",
              "valueReference": {
                "reference": "Bundle/PDQSearchResults"
              }
            }
          ],
          "versionId": "4"
        }
      ]
    },
    {
      "resourceId": "Request5",
      "resourceType": "Binary",
      "name": "HL7 v2 MDM_T02 - regional",
      "description": " [Regional Hl7 v2 MDM_T02](hl7v2.html#mdm_t02-original-document-notification-and-content-1) The format of the report is PDF, in future for England/EU document sharing the format may change to [HL7 EU Laboratory Report](https://hl7.eu/fhir/laboratory/) "
    },
    {
      "resourceId": "Request6",
      "resourceType": "Bundle",
      "name": "HL7 FHIR Message R01 - regional",
      "version": [
        {
          "extension": [
            {
              "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ExampleScenario.instance.version.title",
              "valueString": "HL7 FHIR Message R01"
            },
            {
              "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ExampleScenario.instance.version.content",
              "valueReference": {
                "reference": "Bundle/GenomicsReportMessage"
              }
            }
          ],
          "versionId": "6"
        }
      ]
    }
  ],
  "process": [
    {
      "title": "Send Report to Order Placer",
      "description": "The report is sent from the LIMS using HL7 ORU_R01 and this is sent to the Order Placer/EPR via middleware",
      "preConditions": "Test Order has been received ([Genomic Test Order Process](ExampleScenario-GenomicTestOrderProcess.html)), specimen has been collected (e.g. [Biopsy Procedure](ExampleScenario-BiopsyProcedure.html)), has physically arrived and the test(s) have been performed",
      "step": [
        {
          "operation": {
            "number": "1",
            "type": "create",
            "name": "Send Laboratory Report ORU_R01 v2",
            "initiator": "filler",
            "receiver": "rie",
            "description": "TODO",
            "request": {
              "resourceId": "Request1"
            }
          }
        },
        {
          "operation": {
            "number": "2",
            "type": "create",
            "name": "Send Laboratory Report ORU_R01 v2",
            "initiator": "rie",
            "receiver": "tie",
            "description": "Routes the report to NHS Trust which placed the order. At present the report will only be sent to regional NHS Trusts, in future this will include the NHS England Genomic Order Management Service to deliver reports to other NHS Trusts",
            "request": {
              "resourceId": "Request2"
            }
          }
        },
        {
          "operation": {
            "number": "7",
            "type": "create",
            "name": "Send Laboratory Report ORU_R01 v2",
            "initiator": "tie",
            "receiver": "epr",
            "description": "Routes the report to the Order Placer and/or EPR",
            "request": {
              "resourceId": "Request7"
            }
          }
        }
      ]
    },
    {
      "title": "Send Report to ICS",
      "description": "The report to ICS HL7 MDM_T02. The report is routed to the ICS based on which general practice the patient is registered with",
      "preConditions": "Patient has a NHS Number",
      "step": [
        {
          "operation": {
            "number": "4",
            "type": "search-type",
            "name": "Patient Demographics Query",
            "initiator": "rie",
            "receiver": "cdr",
            "description": "This is an internal API which includes use of NHS England Personal Demographics Service",
            "request": {
              "resourceId": "Request4"
            },
            "response": {
              "resourceId": "Reply4"
            }
          }
        },
        {
          "operation": {
            "number": "5",
            "type": "create",
            "name": "Send Laboratory Report MDM_T02 v2",
            "initiator": "rie",
            "receiver": "hie",
            "description": "The report is routed to the ICS system which covers the Patients GP Surgery. For IHE XDS destinations this may include conversion to IHE ITI-41 ",
            "request": {
              "resourceId": "Request5"
            }
          }
        }
      ]
    },
    {
      "title": "Send Report to Regional Genomic CDR",
      "description": "The report is sent to the regional Clinical Data Repository which shares the report using FHIR RESTful readonly APIs",
      "step": [
        {
          "operation": {
            "number": "6",
            "type": "create",
            "name": "Send Laboratory Report R01 FHIR",
            "initiator": "rie",
            "receiver": "cdr",
            "description": "The v2 message is transformed to a FHIR Message",
            "request": {
              "resourceId": "Request6"
            }
          }
        }
      ]
    }
  ]
}