FHIR © HL7.org  |  FHIRsmith 0.18.0  |  Server Home  |  XIG Home  |  XIG Stats  | 

FHIR IG analytics

Packagefhir.nwgenomics.nhs.uk
Resource TypeBasic
IdBasic-GenomicAnalysisAndInterpretation.json
FHIR VersionR4
Sourcehttps://build.fhir.org/ig/nw-gmsa/nw-gmsa.github.com/ActorDefinition-GenomicAnalysisAndInterpretation.html
URLhttps://fhir.nwgenomics.nhs.uk/ActorDefinition/GenomicAnalysisAndInterpretation
Version2.2.2
Statusdraft
Date2026-10-22T10:10:51+00:00
NameGenomicAnalysisAndInterpretation
TitleGenomic Analysis and Interpretation
Realmus
Authorityhl7

Resources that use this resource

No resources found


Resources that this resource uses

No resources found


Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: ActorDefinition GenomicAnalysisAndInterpretation

Actor: GenomicAnalysisAndInterpretation Genomic Analysis and InterpretationType: system

Receives raw genomic data (e.g. sequence data or satellite LIMS results) produced by analysers, together with the work order and its case context (e.g. pedigree, phenotype, clinical indication and panels). Processes the raw data into variants and prioritises them (bioinformatics pipeline). Supports interpretation, often with a clinical scientist involved, to select and classify the reportable variants. Returns the reportable variants and a summary interpretation (e.g. a genomic report) to the Order Filler. This actor may later be split into a Bioinformatics Processor and an Interpretation / Decision Support actor.


Source1

{
  "resourceType": "Basic",
  "id": "GenomicAnalysisAndInterpretation",
  "text": {
    "status": "generated",
    "div": "<!-- snip (see above) -->"
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.url",
      "valueUri": "https://fhir.nwgenomics.nhs.uk/ActorDefinition/GenomicAnalysisAndInterpretation"
    },
    {
      "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.version",
      "valueString": "2.2.2"
    },
    {
      "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.name",
      "valueString": "GenomicAnalysisAndInterpretation"
    },
    {
      "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.title",
      "valueString": "Genomic Analysis and Interpretation"
    },
    {
      "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.status",
      "valueCode": "draft"
    },
    {
      "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.date",
      "valueDateTime": "2026-10-22T10:10:51+00:00"
    },
    {
      "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.publisher",
      "valueString": "NHS North West Genomics"
    },
    {
      "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.contact",
      "valueContactDetail": {
        "telecom": [
          {
            "system": "url",
            "value": "https://www.nwgenomics.nhs.uk/contact-us"
          }
        ]
      }
    },
    {
      "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.description",
      "valueMarkdown": "Analyses and interprets raw genomic data. Implemented by bioinformatics pipelines and Decision Support Systems (DSS), e.g. Omics DSS, or the Genomics England bioinformatics pipeline, interpretation services and Interpretation Portal."
    },
    {
      "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.jurisdiction",
      "valueCodeableConcept": {
        "coding": [
          {
            "system": "urn:iso:std:iso:3166",
            "code": "GB",
            "display": "United Kingdom of Great Britain and Northern Ireland"
          }
        ]
      }
    },
    {
      "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.type",
      "valueCode": "system"
    },
    {
      "url": "http://hl7.org/fhir/5.0/StructureDefinition/extension-ActorDefinition.documentation",
      "valueMarkdown": "Receives raw genomic data (e.g. sequence data or satellite LIMS results) produced by analysers, together with the work order and its case context (e.g. pedigree, phenotype, clinical indication and panels).\nProcesses the raw data into variants and prioritises them (bioinformatics pipeline).\nSupports interpretation, often with a clinical scientist involved, to select and classify the reportable variants.\nReturns the reportable variants and a summary interpretation (e.g. a genomic report) to the Order Filler.\nThis actor may later be split into a Bioinformatics Processor and an Interpretation / Decision Support actor."
    }
  ],
  "code": {
    "coding": [
      {
        "system": "http://hl7.org/fhir/fhir-types",
        "code": "ActorDefinition"
      }
    ]
  }
}