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Packagefhir.gdx
Resource TypeObservation
IdObservation-PrenatalVariantGlycogenStorageDiseaseTypePatientMale.json
FHIR VersionR4

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Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: Observation PrenatalVariantGlycogenStorageDiseaseTypePatientMale

version: 1; Last updated: 2024-10-02 03:41:34+0000;

Information Source: #JVN7S7CW0og8nwN0

Profile: Variant

status: Final

category: Laboratory, Genetics

code: Genetic variant assessment

subject: Higado Sobreviviente (official) Male, DoB: 1996-05-13 ( Patient ID: fec6172efdca41b4a13341e75cb62e0f (use: official, ))

effective: 2024-06-26

performer: Practitioner PractitionerJane Smith

value: Absent

method: Sequencing

component

code: Human reference sequence assembly version

value: GRCh37

component

code: Chromosome [Identifier] in Blood or Tissue by Molecular genetics method

value: Chromosome 1

component

code: Gene studied [ID]

value: AGL


Source1

{
  "resourceType": "Observation",
  "id": "PrenatalVariantGlycogenStorageDiseaseTypePatientMale",
  "meta": {
    "versionId": "1",
    "lastUpdated": "2024-10-02T03:41:34.767+00:00",
    "source": "#JVN7S7CW0og8nwN0",
    "profile": [
      "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant"
    ]
  },
  "text": {
    "status": "generated",
    "div": "<!-- snip (see above) -->"
  },
  "status": "final",
  "category": [
    {
      "coding": [
        {
          "system": "http://terminology.hl7.org/CodeSystem/observation-category",
          "code": "laboratory"
        }
      ]
    },
    {
      "coding": [
        {
          "system": "http://terminology.hl7.org/CodeSystem/v2-0074",
          "code": "GE"
        }
      ]
    }
  ],
  "code": {
    "coding": [
      {
        "system": "http://loinc.org",
        "code": "69548-6",
        "display": "Genetic variant assessment"
      }
    ]
  },
  "subject": {
    "reference": "Patient/PatientMale"
  },
  "effectiveDateTime": "2024-06-26",
  "performer": [
    {
      "reference": "Practitioner/PractitionerLabDirector"
    }
  ],
  "valueCodeableConcept": {
    "coding": [
      {
        "system": "http://loinc.org",
        "code": "LA9634-2",
        "display": "Absent"
      }
    ]
  },
  "method": {
    "coding": [
      {
        "system": "http://loinc.org",
        "code": "LA26398-0",
        "display": "Sequencing"
      }
    ]
  },
  "component": [
    {
      "code": {
        "coding": [
          {
            "system": "http://loinc.org",
            "code": "62374-4",
            "display": "Human reference sequence assembly version"
          }
        ]
      },
      "valueCodeableConcept": {
        "coding": [
          {
            "system": "http://loinc.org",
            "code": "LA14029-5",
            "display": "GRCh37"
          }
        ]
      }
    },
    {
      "code": {
        "coding": [
          {
            "system": "http://loinc.org",
            "code": "48000-4",
            "display": "Chromosome [Identifier] in Blood or Tissue by Molecular genetics method"
          }
        ]
      },
      "valueCodeableConcept": {
        "coding": [
          {
            "system": "http://loinc.org",
            "code": "LA21254-0",
            "display": "Chromosome 1"
          }
        ]
      }
    },
    {
      "code": {
        "coding": [
          {
            "system": "http://loinc.org",
            "code": "48018-6",
            "display": "Gene studied [ID]"
          }
        ]
      },
      "valueCodeableConcept": {
        "coding": [
          {
            "system": "http://www.genenames.org",
            "code": "HGNC:321",
            "display": "AGL"
          }
        ]
      }
    }
  ]
}