FHIRsmith: Group/Group-example-collection-group.json

FHIR IG analytics

Package	eu.miabis.r4
Resource Type	Group
Id	Group-example-collection-group.json
FHIR Version	R4

Resources that use this resource

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Resources that this resource uses

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Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: Group example-collection-group

Profile: Collection

Number Of Subjects: 100

Inclusion Criteria Extension: Health status

Member Entity: Specimen: extension = https://directory.bbmri-eric.eu/#bbmri:exampleID; identifier = sampleId; type = Buffy coat; note = This is a restriction of sample usage

identifier: collectionId

active: true

type: Person

actual: true

name: CollectionName

managingEntity: Organization biobankName

characteristic
code: Age range
value: 18-65 years
exclude: false

characteristic
code: Sex
value: Female
exclude: false

characteristic
code: Storage temperature
value: Room temperature
exclude: false

characteristic
code: Material type
value: RNA
exclude: false

characteristic
code: Diagnosis
value: Malignant neoplasm of breast
exclude: false

Source1

{
  "resourceType": "Group",
  "id": "example-collection-group",
  "meta": {
    "profile": [
      "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-collection"
    ]
  },
  "text": {
    "status": "extensions",
    "div": "<!-- snip (see above) -->"
  },
  "extension": [
    {
      "url": "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-number-of-subjects-extension",
      "valueInteger": 100
    },
    {
      "url": "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-inclusion-criteria-extension",
      "valueCodeableConcept": {
        "coding": [
          {
            "system": "https://fhir.bbmri-eric.eu/CodeSystem/miabis-inclusion-criteria-cs",
            "code": "HealthStatus"
          }
        ]
      }
    },
    {
      "url": "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-member-entity-extension",
      "valueReference": {
        "reference": "Specimen/example"
      }
    }
  ],
  "identifier": [
    {
      "value": "collectionId"
    }
  ],
  "active": true,
  "type": "person",
  "actual": true,
  "name": "CollectionName",
  "managingEntity": {
    "reference": "Organization/example-biobank"
  },
  "characteristic": [
    {
      "code": {
        "coding": [
          {
            "system": "https://fhir.bbmri-eric.eu/CodeSystem/miabis-characteristicCS",
            "code": "Age"
          }
        ]
      },
      "valueRange": {
        "low": {
          "value": 18,
          "unit": "years"
        },
        "high": {
          "value": 65,
          "unit": "years"
        }
      },
      "exclude": false
    },
    {
      "code": {
        "coding": [
          {
            "system": "https://fhir.bbmri-eric.eu/CodeSystem/miabis-characteristicCS",
            "code": "Sex"
          }
        ]
      },
      "valueCodeableConcept": {
        "coding": [
          {
            "system": "http://hl7.org/fhir/administrative-gender",
            "code": "female"
          }
        ]
      },
      "exclude": false
    },
    {
      "code": {
        "coding": [
          {
            "system": "https://fhir.bbmri-eric.eu/CodeSystem/miabis-characteristicCS",
            "code": "StorageTemperature"
          }
        ]
      },
      "valueCodeableConcept": {
        "coding": [
          {
            "system": "https://fhir.bbmri-eric.eu/CodeSystem/miabis-storage-temperature-cs",
            "code": "RT"
          }
        ]
      },
      "exclude": false
    },
    {
      "code": {
        "coding": [
          {
            "system": "https://fhir.bbmri-eric.eu/CodeSystem/miabis-characteristicCS",
            "code": "MaterialType"
          }
        ]
      },
      "valueCodeableConcept": {
        "coding": [
          {
            "system": "https://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-cs",
            "code": "RNA"
          }
        ]
      },
      "exclude": false
    },
    {
      "code": {
        "coding": [
          {
            "system": "https://fhir.bbmri-eric.eu/CodeSystem/miabis-characteristicCS",
            "code": "Diagnosis"
          }
        ]
      },
      "valueCodeableConcept": {
        "coding": [
          {
            "system": "http://hl7.org/fhir/sid/icd-10",
            "code": "C50"
          }
        ]
      },
      "exclude": false
    }
  ]
}