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Packageeu.miabis.r4
Resource TypeCodeSystem
IdCodeSystem-miabis-detailed-samply-type-cs.json
FHIR VersionR4
Sourcehttps://simplifier.net/resolve?scope=eu.miabis.r4@1.3.0&canonical=https://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-cs
URLhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-cs
Version1.3.0
Statusactive
Date2026-06-22T09:58:20+00:00
NameDetailedSampleTypeCS
TitleDetailedSampleType
DescriptionCode system for the detailed sample type of a sample
Contentcomplete

Resources that use this resource

ValueSet
eu.miabis.r4#1.3.0miabis-detailed-sample-type-vsDetailedSampleTypeVS

Resources that this resource uses

No resources found


Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: CodeSystem miabis-detailed-samply-type-cs

This code system https://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-cs defines the following codes:

CodeDisplay
AmnioticFluid Amniotic fluid
AscitesFluid Ascites Fluid
Bile Bile
BodyCavityFluid Body cavity fluid
Bone Bone
BoneMarrowAspirate Bone marrow aspirate
BoneMarrowPlasma Bone marrow plasma
BoneMarrowWhole Bone marrow whole
BreastMilk Breast milk
BronchLavage Bronchoalveolar lavage
BuffyCoat Buffy coat
CancerCellLine Cancer cell lines
CerebrospinalFluid Cerebrospinal fluid
CordBlood Cord blood
DentalPulp Dental pulp
DNA DNA
Embryo Embryo
EntireOrgan Entire body Organ
Faeces Faeces
FetalTissue Fetal tissue
Fibroblast Fibroblast
FoodSpecimen Food specimen
Gas Gas exhaled (breath)
GastricFluid Gastric fluid
Hair Hair
ImmortalizedCellLine Immortalized cell line
IsolatedMicrobe Isolated microbes
IsolatedExosome Isolated or encriched exosomes
IsolatedTumorCell Isolated tumor cells(neoplastic cells)
LiquidBiopsy Liquid biopsy
MenstrualBlood Menstrual blood
Nail Nail
NasalWashing Nasal washing
Organoid Organoids
Other Other
PericardialFluid Pericardial fluid
PBMC Peripheral blood mononuclear cells
Placenta Placenta
Plasma Plasma
PleuralFluid Pleural fluid
PostMortemTissue Post-mortem tissue
PrimaryCells Primary cells
Protein Protein
RedBloodCells Red blood cells
RNA RNA
Saliva Saliva
Semen Semen
Serum Serum
SpecimenEnvironment Specimen from environment
Sputum Sputum
StemCells Stem cells and iPS cells
Swab Swab
Sweat Sweat
SynovialFluid Synovial fluid
Tears Tears
Teeth Teeth
TissueFixed Tissue (fixed)
TissueFreshFrozen Tissue (fresh frozen)
UmbilicalCord Umbilical cord
Urine Urine
UrineSediment Urine sediment
VitreousFluid Vitreous fluid
WholeBlood Whole blood
WholeBloodDried Whole blood dried(eg. Guthrie card)

Source1

{
  "resourceType": "CodeSystem",
  "id": "miabis-detailed-samply-type-cs",
  "text": {
    "status": "generated",
    "div": "<!-- snip (see above) -->"
  },
  "url": "https://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-cs",
  "version": "1.3.0",
  "name": "DetailedSampleTypeCS",
  "title": "DetailedSampleType",
  "status": "active",
  "date": "2026-06-22T09:58:20+00:00",
  "publisher": "BBMRI-ERIC",
  "contact": [
    {
      "name": "BBMRI-ERIC",
      "telecom": [
        {
          "system": "url",
          "value": "http://bbmri-eric.eu"
        },
        {
          "system": "email",
          "value": "contact@bbmri-eric.eu"
        }
      ]
    },
    {
      "name": "Radovan Tomasik",
      "telecom": [
        {
          "system": "email",
          "value": "radovan.tomasik@bbmri-eric.eu",
          "use": "work"
        }
      ]
    }
  ],
  "description": "Code system for the detailed sample type of a sample",
  "content": "complete",
  "count": 64,
  "concept": [
    {
      "code": "AmnioticFluid",
      "display": "Amniotic fluid"
    },
    {
      "code": "AscitesFluid",
      "display": "Ascites Fluid"
    },
    {
      "code": "Bile",
      "display": "Bile"
    },
    {
      "code": "BodyCavityFluid",
      "display": "Body cavity fluid"
    },
    {
      "code": "Bone",
      "display": "Bone"
    },
    {
      "code": "BoneMarrowAspirate",
      "display": "Bone marrow aspirate"
    },
    {
      "code": "BoneMarrowPlasma",
      "display": "Bone marrow plasma"
    },
    {
      "code": "BoneMarrowWhole",
      "display": "Bone marrow whole"
    },
    {
      "code": "BreastMilk",
      "display": "Breast milk"
    },
    {
      "code": "BronchLavage",
      "display": "Bronchoalveolar lavage"
    },
    {
      "code": "BuffyCoat",
      "display": "Buffy coat"
    },
    {
      "code": "CancerCellLine",
      "display": "Cancer cell lines"
    },
    {
      "code": "CerebrospinalFluid",
      "display": "Cerebrospinal fluid"
    },
    {
      "code": "CordBlood",
      "display": "Cord blood"
    },
    {
      "code": "DentalPulp",
      "display": "Dental pulp"
    },
    {
      "code": "DNA",
      "display": "DNA"
    },
    {
      "code": "Embryo",
      "display": "Embryo"
    },
    {
      "code": "EntireOrgan",
      "display": "Entire body Organ"
    },
    {
      "code": "Faeces",
      "display": "Faeces"
    },
    {
      "code": "FetalTissue",
      "display": "Fetal tissue"
    },
    {
      "code": "Fibroblast",
      "display": "Fibroblast"
    },
    {
      "code": "FoodSpecimen",
      "display": "Food specimen"
    },
    {
      "code": "Gas",
      "display": "Gas exhaled (breath)"
    },
    {
      "code": "GastricFluid",
      "display": "Gastric fluid"
    },
    {
      "code": "Hair",
      "display": "Hair"
    },
    {
      "code": "ImmortalizedCellLine",
      "display": "Immortalized cell line"
    },
    {
      "code": "IsolatedMicrobe",
      "display": "Isolated microbes"
    },
    {
      "code": "IsolatedExosome",
      "display": "Isolated or encriched exosomes"
    },
    {
      "code": "IsolatedTumorCell",
      "display": "Isolated tumor cells(neoplastic cells)"
    },
    {
      "code": "LiquidBiopsy",
      "display": "Liquid biopsy"
    },
    {
      "code": "MenstrualBlood",
      "display": "Menstrual blood"
    },
    {
      "code": "Nail",
      "display": "Nail"
    },
    {
      "code": "NasalWashing",
      "display": "Nasal washing"
    },
    {
      "code": "Organoid",
      "display": "Organoids"
    },
    {
      "code": "Other",
      "display": "Other"
    },
    {
      "code": "PericardialFluid",
      "display": "Pericardial fluid"
    },
    {
      "code": "PBMC",
      "display": "Peripheral blood mononuclear cells"
    },
    {
      "code": "Placenta",
      "display": "Placenta"
    },
    {
      "code": "Plasma",
      "display": "Plasma"
    },
    {
      "code": "PleuralFluid",
      "display": "Pleural fluid"
    },
    {
      "code": "PostMortemTissue",
      "display": "Post-mortem tissue"
    },
    {
      "code": "PrimaryCells",
      "display": "Primary cells"
    },
    {
      "code": "Protein",
      "display": "Protein"
    },
    {
      "code": "RedBloodCells",
      "display": "Red blood cells"
    },
    {
      "code": "RNA",
      "display": "RNA"
    },
    {
      "code": "Saliva",
      "display": "Saliva"
    },
    {
      "code": "Semen",
      "display": "Semen"
    },
    {
      "code": "Serum",
      "display": "Serum"
    },
    {
      "code": "SpecimenEnvironment",
      "display": "Specimen from environment"
    },
    {
      "code": "Sputum",
      "display": "Sputum"
    },
    {
      "code": "StemCells",
      "display": "Stem cells and iPS cells"
    },
    {
      "code": "Swab",
      "display": "Swab"
    },
    {
      "code": "Sweat",
      "display": "Sweat"
    },
    {
      "code": "SynovialFluid",
      "display": "Synovial fluid"
    },
    {
      "code": "Tears",
      "display": "Tears"
    },
    {
      "code": "Teeth",
      "display": "Teeth"
    },
    {
      "code": "TissueFixed",
      "display": "Tissue (fixed)"
    },
    {
      "code": "TissueFreshFrozen",
      "display": "Tissue (fresh frozen)"
    },
    {
      "code": "UmbilicalCord",
      "display": "Umbilical cord"
    },
    {
      "code": "Urine",
      "display": "Urine"
    },
    {
      "code": "UrineSediment",
      "display": "Urine sediment"
    },
    {
      "code": "VitreousFluid",
      "display": "Vitreous fluid"
    },
    {
      "code": "WholeBlood",
      "display": "Whole blood"
    },
    {
      "code": "WholeBloodDried",
      "display": "Whole blood dried(eg. Guthrie card)"
    }
  ]
}